Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34246 Sapria himalayana HOM05D004560 ORTHO05D005540 0.0e+00 3147.5 1712 100.0
Sabra05G0109900 Salix brachista HOM05D004560 ORTHO05D005540 4.3e-187 660.2 1779 37.3
Duzib187G0053 Durio zibethinus HOM05D004560 ORTHO05D005540 9.8e-184 649.0 1818 35.2
Manes.12G101400 Manihot esculenta HOM05D004560 ORTHO05D005540 1.7e-183 648.3 1784 35.7
Potri.007G043300 Populus trichocarpa HOM05D004560 ORTHO05D005540 2.9e-183 647.5 1801 36.4
Potri.005G137700 Populus trichocarpa HOM05D004560 ORTHO05D005540 4.6e-181 640.2 1784 36.3
Ciclev10024681m.g Citrus clementina HOM05D004560 ORTHO05D005540 2.2e-175 621.3 1816 35.1
Cfa004012 Carpinus fangiana HOM05D004560 ORTHO05D005540 4.1e-174 617.1 1816 34.6
Manes.12G101200 Manihot esculenta HOM05D004560 ORTHO05D005540 4.6e-173 613.6 1795 35.0
QL06p041719 Quercus lobata HOM05D004560 ORTHO05D005540 1.3e-172 612.1 1831 35.2
Thecc.01G055000 Theobroma cacao HOM05D004560 ORTHO05D005540 2.8e-170 604.4 1802 33.7
Gorai.008G075400 Gossypium raimondii HOM05D004560 ORTHO05D005540 1.1e-169 602.4 1804 34.5
Gohir.A12G072000 Gossypium hirsutum HOM05D004560 ORTHO05D005540 2.3e-169 601.3 1810 35.0
Prupe.7G134200 Prunus persica HOM05D004560 ORTHO05D005540 2.3e-169 601.3 1816 35.0
Gohir.D12G068900 Gossypium hirsutum HOM05D004560 ORTHO05D005540 5.2e-169 600.1 1805 34.7
Haze_15408 Corylus avellana HOM05D004560 ORTHO05D005540 2.4e-166 591.3 1813 34.3
Sabra07G0038200 Salix brachista HOM05D004560 ORTHO05D005540 7.1e-166 589.7 1788 35.1
Duzib264G0542 Durio zibethinus HOM05D004560 ORTHO05D005540 9.2e-166 589.3 1818 34.4
Duzib147G0064 Durio zibethinus HOM05D004560 ORTHO05D005540 2.1e-165 588.2 1820 34.5
MD02G1171200 Malus domestica HOM05D004560 ORTHO05D005540 1.1e-163 582.4 1816 35.1
Gorai.008G075200 Gossypium raimondii HOM05D004560 ORTHO05D005540 1.9e-158 565.1 1806 34.4
TWI53G0832 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 1.9e-158 565.1 1743 34.5
TWI73G0239 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 2.4e-158 564.7 1796 34.5
Gohir.A12G070800 Gossypium hirsutum HOM05D004560 ORTHO05D005540 7.8e-157 559.7 1809 33.9
TWI09G1111 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 7.8e-157 559.7 1790 33.8
Gohir.D12G068700 Gossypium hirsutum HOM05D004560 ORTHO05D005540 1.3e-156 558.9 1805 34.2
MD15G1283100 Malus domestica HOM05D004560 ORTHO05D005540 1.9e-150 538.5 1810 33.8
CiPaw.02G008700 Carya illinoinensis HOM05D004560 ORTHO05D005540 2.1e-146 525.0 1830 32.6
CANSAT01G1534 Cannabis sativa HOM05D004560 ORTHO05D005540 3.6e-146 524.2 1804 34.6
Lalb_Chr16g0378501 Lupinus albus HOM05D004560 ORTHO05D005540 2.9e-143 514.6 1765 32.1
FvH4_5g28170 Fragaria vesca HOM05D004560 ORTHO05D005540 2.4e-137 495.0 1809 33.3
CSS0026663 Camellia sinensis var. sinensis HOM05D004560 ORTHO05D005540 4.0e-137 494.2 1818 32.7
FAN18G2522 Fragaria x ananassa HOM05D004560 ORTHO05D005540 3.2e-134 484.6 1741 33.6
Lalb_Chr09g0323121 Lupinus albus HOM05D004560 ORTHO05D005540 4.2e-134 484.2 1764 31.0
TAR376G0591 Trochodendron aralioides HOM05D004560 ORTHO05D005540 7.1e-134 483.4 1832 32.1
FAN04G2449 Fragaria x ananassa HOM05D004560 ORTHO05D005540 5.1e-132 477.2 1817 32.7
Nn1g04868 Nelumbo nucifera HOM05D004560 ORTHO05D005540 5.1e-132 477.2 1849 32.3
FAN08G1993 Fragaria x ananassa HOM05D004560 ORTHO05D005540 5.7e-131 473.8 1737 33.0
COL.COLO4_11405 Corchorus olitorius HOM05D004560 ORTHO05D005540 6.3e-130 470.3 1754 31.7
MBI02_g02993_MAGBIO Magnolia biondii HOM05D004560 ORTHO05D005540 8.2e-130 469.9 1846 32.3
TAR381G0340 Trochodendron aralioides HOM05D004560 ORTHO05D005540 2.0e-128 465.3 1836 31.3
Lj7A70T81 Lonicera japonica HOM05D004560 ORTHO05D005540 1.3e-127 462.6 1749 32.7
Lalb_Chr09g0323141 Lupinus albus HOM05D004560 ORTHO05D005540 1.4e-126 459.1 1691 31.9
VMungo0251G0843 Vigna mungo HOM05D004560 ORTHO05D005540 1.4e-126 459.1 1780 31.9
Lj4g0000036 Lotus japonicus HOM05D004560 ORTHO05D005540 2.5e-126 458.4 1800 31.1
ClCG01G016790 Citrullus lanatus HOM05D004560 ORTHO05D005540 1.0e-124 453.0 1821 32.2
Phvul.003G244225 Phaseolus vulgaris HOM05D004560 ORTHO05D005540 1.1e-123 449.5 1784 31.3
arahy.Tifrunner.gnm1.ann1.TDMJ0N Arachis hypogaea HOM05D004560 ORTHO05D005540 1.3e-122 446.0 1796 31.6
Actinidia03789 Actinidia chinensis HOM05D004560 ORTHO05D005540 3.1e-121 441.4 1765 32.4
Aqoxy5G01239 Aquilegia oxysepala HOM05D004560 ORTHO05D005540 5.3e-121 440.7 1826 30.2
RcHm_v2.0_Chr2g0105371 Rosa chinensis HOM05D004560 ORTHO05D005540 5.3e-121 440.7 1708 32.7
Ca_19501_v3 Cicer arietinum L. HOM05D004560 ORTHO05D005540 1.2e-120 439.5 1793 31.6
TPR.G10251 Trifolium pratense HOM05D004560 ORTHO05D005540 1.3e-119 436.0 1722 31.5
Glyma.17G175000 Glycine max HOM05D004560 ORTHO05D005540 1.7e-119 435.6 1784 31.0
arahy.Tifrunner.gnm1.ann1.IC24VR Arachis hypogaea HOM05D004560 ORTHO05D005540 2.5e-118 431.8 1796 31.5
Psat4g089080 Pisum sativum HOM05D004560 ORTHO05D005540 7.2e-118 430.3 1751 30.3
Nn5g30326 Nelumbo nucifera HOM05D004560 ORTHO05D005540 2.1e-117 428.7 1835 30.9
CsaV3_6G043220 Cucumis sativus L. HOM05D004560 ORTHO05D005540 3.9e-116 424.5 1794 31.4
Atru.chr10.1634 Acer truncatum HOM05D004560 ORTHO05D005540 1.5e-115 422.5 1070 37.2
Sc03g0001520 Simmondsia chinensis HOM05D004560 ORTHO05D005540 2.4e-113 415.2 1756 31.6
Oeu039071.1 Olea europaea HOM05D004560 ORTHO05D005540 4.1e-113 414.5 1777 29.9
CSS0033893 Camellia sinensis var. sinensis HOM05D004560 ORTHO05D005540 5.3e-113 414.1 1726 31.9
Oeu003960.1 Olea europaea HOM05D004560 ORTHO05D005540 3.4e-112 411.4 1749 29.9
Nitab4.5_0001034g0140 Nicotiana tabacum HOM05D004560 ORTHO05D005540 2.2e-111 408.7 1832 30.1
CAN.G836.79 Capsicum annuum HOM05D004560 ORTHO05D005540 3.8e-111 407.9 1813 30.7
AL5G30500 Arabidopsis lyrata HOM05D004560 ORTHO05D005540 2.5e-110 405.2 1718 30.3
Peaxi162Scf00450g00514 Petunia axillaris HOM05D004560 ORTHO05D005540 2.5e-110 405.2 1817 30.7
Nitab4.5_0002016g0010 Nicotiana tabacum HOM05D004560 ORTHO05D005540 7.2e-110 403.7 1835 30.1
Eucgr.I00932 Eucalyptus grandis HOM05D004560 ORTHO05D005540 7.9e-109 400.2 1825 30.8
THA.LOC104819234 Tarenaya hassleriana HOM05D004560 ORTHO05D005540 2.6e-107 395.2 1752 30.9
Sopen02g035390 Solanum pennellii HOM05D004560 ORTHO05D005540 7.4e-107 393.7 1813 30.3
Hund13557 Selenicereus undatus HOM05D004560 ORTHO05D005540 9.7e-107 393.3 1807 30.9
Sed0025145 Sechium edule HOM05D004560 ORTHO05D005540 1.7e-106 392.5 1803 30.2
AT3G50370 Arabidopsis thaliana HOM05D004560 ORTHO05D005540 2.4e-105 388.7 1694 30.4
HanXRQChr14g0448241 Helianthus annuus HOM05D004560 ORTHO05D005540 9.1e-105 386.7 1691 30.9
GSVIVG01022139001 Vitis vinifera HOM05D004560 ORTHO05D005540 1.2e-104 386.3 1709 31.1
Lsat_1_v5_gn_2_84180 Lactuca sativa HOM05D004560 ORTHO05D005540 3.5e-104 384.8 1712 30.7
MELO3C007558.2 Cucumis melo HOM05D004560 ORTHO05D005540 7.7e-104 383.6 1569 32.7
Sed0014897 Sechium edule HOM05D004560 ORTHO05D005540 5.0e-103 380.9 1799 30.4
PGR031G0319 Punica granatum HOM05D004560 ORTHO05D005540 8.5e-103 380.2 1618 32.6
AUR62003874 Chenopodium quinoa HOM05D004560 ORTHO05D005540 2.3e-100 372.1 1731 29.3
Rhsim08G0100900 Rhododendron simsii HOM05D004560 ORTHO05D005540 2.3e-100 372.1 1799 30.9
DCAR_014074 Daucus carota HOM05D004560 ORTHO05D005540 4.0e-100 371.3 1798 30.1
HanXRQChr14g0442851 Helianthus annuus HOM05D004560 ORTHO05D005540 2.6e-99 368.6 1667 30.1
Aa31LG4G18600 Aethionema arabicum HOM05D004560 ORTHO05D005540 5.7e-99 367.5 1740 29.5
Glyma.05G096000 Glycine max HOM05D004560 ORTHO05D005540 1.7e-98 365.9 1763 29.8
vmacro17949 Vaccinium macrocarpon HOM05D004560 ORTHO05D005540 4.8e-98 364.4 1769 30.6
Carub.0005s1668 Capsella rubella HOM05D004560 ORTHO05D005540 2.5e-94 352.1 1674 30.1
PSO135G0768 Papaver somniferum HOM05D004560 ORTHO05D005540 5.5e-94 350.9 1879 29.0
ECA238G3505 Erigeron canadensis HOM05D004560 ORTHO05D005540 2.7e-93 348.6 1744 30.2
Sp5g11810 Schrenkiella parvula HOM05D004560 ORTHO05D005540 8.0e-93 347.1 1728 29.9
PSO384G0851 Papaver somniferum HOM05D004560 ORTHO05D005540 1.4e-92 346.3 1877 28.6
Solyc02g090760.4 Solanum lycopersicum HOM05D004560 ORTHO05D005540 2.2e-90 339.0 1703 29.7
PSO017G5866 Papaver somniferum HOM05D004560 ORTHO05D005540 4.1e-89 334.7 1778 28.5
MSTRG.23750 Avicennia marina HOM05D004560 ORTHO05D005540 9.1e-89 333.6 1813 28.5
Dinv39857 Davidia involucrata HOM05D004560 ORTHO05D005540 5.9e-88 330.9 1247 34.2
AUR62001937 Chenopodium quinoa HOM05D004560 ORTHO05D005540 6.1e-85 320.9 1674 28.7
Thhalv10010051m.g Eutrema salsugineum HOM05D004560 ORTHO05D005540 4.9e-82 311.2 1648 28.6
EL10Ac4g07947 Beta vulgaris HOM05D004560 ORTHO05D005540 6.3e-82 310.8 1746 27.7
PSO170G6095 Papaver somniferum HOM05D004560 ORTHO05D005540 5.9e-72 277.7 1789 27.1
Cpa.g.sc55.158 Carica papaya HOM05D004560 ORTHO05D005540 1.1e-70 273.5 1003 33.7
CARHR159850 Cardamine hirsuta HOM05D004560 ORTHO05D005540 1.6e-69 269.6 1641 28.0
BcaB01g00621 Brassica carinata HOM05D004560 ORTHO05D005540 1.0e-68 266.9 1603 28.3
Cc07_g19160 Coffea canephora HOM05D004560 ORTHO05D005540 1.7e-66 259.6 1792 27.4
Actinidia16497 Actinidia chinensis HOM05D004560 ORTHO05D005540 6.6e-63 247.7 898 33.9
TAR628G1123 Trochodendron aralioides HOM05D004560 ORTHO05D005540 7.3e-62 244.2 935 32.1
BcaC07g39495 Brassica carinata HOM05D004560 ORTHO05D005540 4.7e-61 241.5 1528 29.2
C08p25410 Brassica napus HOM05D004560 ORTHO05D005540 4.7e-61 241.5 1528 29.2
BolC8t50162H Brassica oleracea HOM05D004560 ORTHO05D005540 4.7e-61 241.5 1528 29.2
ATR0753G002 Amborella trichopoda HOM05D004560 ORTHO05D005540 3.9e-55 221.9 1779 26.3
Dinv39858 Davidia involucrata HOM05D004560 ORTHO05D005540 2.5e-54 219.2 511 34.4
A09p43370 Brassica napus HOM05D004560 ORTHO05D005540 2.1e-53 216.1 1520 28.4
BraA09t39806Z Brassica rapa HOM05D004560 ORTHO05D005540 8.9e-52 210.7 1516 28.4
Migut.N01430 Erythranthe guttata HOM05D004560 ORTHO05D005540 5.4e-49 201.4 691 35.9
Zm00001eb019260 Zea mays HOM05D004560 ORTHO05D005540 1.6e-40 173.3 1698 27.5
HPP92_004113 Vanilla planifolia HOM05D004560 ORTHO05D005540 8.7e-39 167.5 1390 27.8
RcHm_v2.0_Chr2g0145051 Rosa chinensis HOM05D004560 ORTHO05D005540 2.4e-33 149.4 250 44.8
SEGI_38337 Sequoiadendron giganteum HOM05D004560 ORTHO05D005540 1.2e-32 147.1 1586 25.3
RcHm_v2.0_Chr4g0416641 Rosa chinensis HOM05D004560 ORTHO05D005540 2.7e-32 146.0 250 44.4
unitig_736.g22379 Utricularia gibba HOM05D004560 ORTHO05D005540 1.0e-31 144.1 1297 26.4
Cpa.g.sc55.157 Carica papaya HOM05D004560 ORTHO05D005540 1.8e-31 143.3 523 30.6
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 3.9e-31 142.1 553 26.9
HPP92_004077 Vanilla planifolia HOM05D004560 ORTHO05D005540 5.6e-30 138.3 1033 29.1
CDE04G1181 Ceratophyllum demersum HOM05D004560 ORTHO05D005540 1.3e-29 137.1 1140 29.2
unitig_899.g14936 Utricularia gibba HOM05D004560 ORTHO05D005540 7.4e-22 111.3 915 26.0
CDE08G0981 Ceratophyllum demersum HOM05D004560 ORTHO05D005540 1.7e-18 100.1 985 24.3
TAR628G0564 Trochodendron aralioides HOM05D004560 ORTHO05D005540 4.6e-16 92.0 535 26.5
CDE04G1185 Ceratophyllum demersum HOM05D004560 ORTHO05D005540 2.5e-14 86.3 237 31.6
unitig_899.g14935 Utricularia gibba HOM05D004560 ORTHO05D005540 1.8e-12 80.1 261 29.5
Sed0026550 Sechium edule HOM05D004560 ORTHO05D005540 1.2e-11 77.4 295 26.8
Psat3g009720 Pisum sativum HOM05D003492 ORTHO05D005540 7.2e-09 68.2 126 37.3
Psat3g009840 Pisum sativum HOM05D004560 ORTHO05D005540 1.6e-08 67.0 126 37.3
Pp3c11_18520 Physcomitrium patens HOM05D004560 ORTHO05D005540 5.1e-07 62.0 685 23.5
Pp3c11_18522 Physcomitrium patens HOM05D004560 ORTHO05D005540 5.1e-07 62.0 685 23.5
Mapoly0121s0051 Marchantia polymorpha HOM05D004560 ORTHO05D005540 1.5e-06 60.5 67 43.3


User provided reference genes

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