Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34205 Sapria himalayana HOM05D004848 ORTHO05D006859 4.5e-222 774.2 377 100.0
Manes.16G057700 Manihot esculenta HOM05D004848 ORTHO05D006859 5.5e-71 272.3 512 37.5
CiPaw.10G064700 Carya illinoinensis HOM05D004848 ORTHO05D006859 6.1e-70 268.9 491 37.5
Carub.0007s2131 Capsella rubella HOM05D004848 ORTHO05D006859 5.7e-68 262.3 435 39.8
CARHR226680 Cardamine hirsuta HOM05D004848 ORTHO05D006859 7.4e-68 261.9 423 40.7
A08p14580 Brassica napus HOM05D004848 ORTHO05D006859 9.7e-68 261.5 402 43.0
BraA08t33444Z Brassica rapa HOM05D004848 ORTHO05D006859 9.7e-68 261.5 402 43.0
BcaB03g11645 Brassica carinata HOM05D004848 ORTHO05D006859 1.3e-67 261.2 411 42.3
AT4G19900 Arabidopsis thaliana HOM05D004848 ORTHO05D006859 2.8e-67 260.0 410 41.0
BcaC01g00643 Brassica carinata HOM05D004848 ORTHO05D006859 3.7e-67 259.6 402 43.0
C03p82150 Brassica napus HOM05D004848 ORTHO05D006859 3.7e-67 259.6 402 43.0
BolC3t20538H Brassica oleracea HOM05D004848 ORTHO05D006859 3.7e-67 259.6 402 43.0
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 4.8e-67 259.2 425 39.8
Thhalv10024627m.g Eutrema salsugineum HOM05D004848 ORTHO05D006859 8.2e-67 258.5 437 40.3
AL7G34080 Arabidopsis lyrata HOM05D004848 ORTHO05D006859 2.4e-66 256.9 437 40.5
Gorai.009G152200 Gossypium raimondii HOM05D004848 ORTHO05D006859 2.4e-66 256.9 440 38.0
CANSAT35G1894 Cannabis sativa HOM05D004848 ORTHO05D006859 3.1e-66 256.5 430 40.7
Gohir.D05G148000 Gossypium hirsutum HOM05D004848 ORTHO05D006859 3.1e-66 256.5 440 38.6
Atru.chr10.537 Acer truncatum HOM05D004848 ORTHO05D006859 9.1e-66 255.0 434 40.1
ClCG01G025720 Citrullus lanatus HOM05D004848 ORTHO05D006859 1.6e-65 254.2 467 38.5
Atru.chr10.533 Acer truncatum HOM05D004848 ORTHO05D006859 2.0e-65 253.8 434 39.9
FvH4_3g12290 Fragaria vesca HOM05D004848 ORTHO05D006859 2.0e-65 253.8 426 39.2
Thecc.06G143000 Theobroma cacao HOM05D004848 ORTHO05D006859 2.6e-65 253.4 450 37.3
Gohir.A05G145600 Gossypium hirsutum HOM05D004848 ORTHO05D006859 3.5e-65 253.1 440 38.6
FAN16G1950 Fragaria x ananassa HOM05D004848 ORTHO05D006859 4.5e-65 252.7 416 39.7
Cfa000710 Carpinus fangiana HOM05D004848 ORTHO05D006859 1.0e-64 251.5 457 38.9
Cpa.g.sc135.8 Carica papaya HOM05D004848 ORTHO05D006859 2.2e-64 250.4 352 43.2
FAN21G0923 Fragaria x ananassa HOM05D004848 ORTHO05D006859 3.8e-64 249.6 424 37.7
Prupe.4G112000 Prunus persica HOM05D004848 ORTHO05D006859 3.8e-64 249.6 456 36.6
FAN25G1789 Fragaria x ananassa HOM05D004848 ORTHO05D006859 5.0e-64 249.2 419 38.7
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 6.5e-64 248.8 435 40.0
Ciclev10014513m.g Citrus clementina HOM05D004848 ORTHO05D006859 2.5e-63 246.9 452 37.8
Potri.015G122200 Populus trichocarpa HOM05D004848 ORTHO05D006859 2.5e-63 246.9 488 36.3
Dinv25912 Davidia involucrata HOM05D004848 ORTHO05D006859 3.2e-63 246.5 491 36.3
SalBow6G5406 Salvia bowleyana HOM05D004848 ORTHO05D006859 3.2e-63 246.5 408 40.9
SalBow8G3445 Salvia bowleyana HOM05D004848 ORTHO05D006859 3.2e-63 246.5 408 40.9
THA.LOC104806215 Tarenaya hassleriana HOM05D004848 ORTHO05D006859 3.2e-63 246.5 465 37.8
MD10G1232500 Malus domestica HOM05D004848 ORTHO05D006859 9.4e-63 245.0 455 37.4
Sed0003868 Sechium edule HOM05D004848 ORTHO05D006859 1.2e-62 244.6 457 37.4
CSS0017265 Camellia sinensis var. sinensis HOM05D004848 ORTHO05D006859 1.6e-62 244.2 487 36.6
CsaV3_6G052960 Cucumis sativus L. HOM05D004848 ORTHO05D006859 1.6e-62 244.2 479 37.0
Sabra15G0138300 Salix brachista HOM05D004848 ORTHO05D006859 2.7e-62 243.4 486 37.2
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 3.6e-62 243.0 284 48.2
Migut.M01981 Erythranthe guttata HOM05D004848 ORTHO05D006859 8.0e-62 241.9 408 39.7
MD05G1251700 Malus domestica HOM05D004848 ORTHO05D006859 1.0e-61 241.5 456 36.4
Lsat_1_v5_gn_2_63860 Lactuca sativa HOM05D004848 ORTHO05D006859 1.4e-61 241.1 414 37.9
MELO3C007013.2 Cucumis melo HOM05D004848 ORTHO05D006859 1.8e-61 240.7 483 36.4
COL.COLO4_30993 Corchorus olitorius HOM05D004848 ORTHO05D006859 3.0e-61 240.0 470 36.2
Oeu056030.1 Olea europaea HOM05D004848 ORTHO05D006859 6.7e-61 238.8 412 38.6
Lj1A1145G19 Lonicera japonica HOM05D004848 ORTHO05D006859 1.5e-60 237.7 338 44.7
RcHm_v2.0_Chr5g0020101 Rosa chinensis HOM05D004848 ORTHO05D006859 1.5e-60 237.7 453 36.0
Duzib160G0177 Durio zibethinus HOM05D004848 ORTHO05D006859 2.0e-60 237.3 445 36.6
Duzib235G0624 Durio zibethinus HOM05D004848 ORTHO05D006859 2.6e-60 236.9 445 36.9
SGA_v2.0_scaffold175G39362 Striga asiatica HOM05D004848 ORTHO05D006859 2.8e-59 233.4 291 47.1
DCAR_007788 Daucus carota HOM05D004848 ORTHO05D006859 6.3e-59 232.3 437 37.5
vmacro03521 Vaccinium macrocarpon HOM05D004848 ORTHO05D006859 6.3e-59 232.3 488 35.9
Actinidia22396 Actinidia chinensis HOM05D004848 ORTHO05D006859 1.1e-58 231.5 466 36.7
HanXRQChr14g0447411 Helianthus annuus HOM05D004848 ORTHO05D006859 1.1e-58 231.5 400 38.0
Rhsim13G0132200 Rhododendron simsii HOM05D004848 ORTHO05D006859 1.8e-58 230.7 476 36.3
MSTRG.13293 Avicennia marina HOM05D004848 ORTHO05D006859 3.1e-58 229.9 410 38.8
TWI38G1208 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 3.1e-58 229.9 527 34.3
TAR371G0760 Trochodendron aralioides HOM05D004848 ORTHO05D006859 5.9e-57 225.7 513 34.3
Cc09_g06070 Coffea canephora HOM05D004848 ORTHO05D006859 2.9e-56 223.4 460 35.9
Nitab4.5_0004246g0030 Nicotiana tabacum HOM05D004848 ORTHO05D006859 1.1e-55 221.5 476 34.7
Lalb_Chr16g0385221 Lupinus albus HOM05D004848 ORTHO05D006859 1.5e-55 221.1 394 39.1
Peaxi162Scf00149g00052 Petunia axillaris HOM05D004848 ORTHO05D006859 9.4e-55 218.4 443 36.6
Sc12g0008200 Simmondsia chinensis HOM05D004848 ORTHO05D006859 1.2e-54 218.0 487 34.9
CiPaw.09G077200 Carya illinoinensis HOM05D004848 ORTHO05D006859 2.1e-54 217.2 453 34.2
Phvul.002G098100 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 2.1e-54 217.2 404 38.1
CAN.G149.35 Capsicum annuum HOM05D004848 ORTHO05D006859 3.6e-54 216.5 465 34.4
Solyc02g068790.4 Solanum lycopersicum HOM05D004848 ORTHO05D006859 3.6e-54 216.5 474 34.0
VMungo0251G2797 Vigna mungo HOM05D004848 ORTHO05D006859 4.7e-54 216.1 404 38.4
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 6.1e-54 215.7 474 34.0
TAR371G0139 Trochodendron aralioides HOM05D004848 ORTHO05D006859 6.1e-54 215.7 508 33.7
Lj4g0026898 Lotus japonicus HOM05D004848 ORTHO05D006859 1.8e-53 214.2 383 39.9
PGR042G2559 Punica granatum HOM05D004848 ORTHO05D006859 8.8e-53 211.8 328 41.8
EL10Ac5g12737 Beta vulgaris HOM05D004848 ORTHO05D006859 2.0e-52 210.7 364 40.9
unitig_21.g20196 Utricularia gibba HOM05D004848 ORTHO05D006859 2.2e-51 207.2 390 35.9
Nitab4.5_0001288g0240 Nicotiana tabacum HOM05D004848 ORTHO05D006859 8.3e-51 205.3 403 35.7
PSO541G1718 Papaver somniferum HOM05D004848 ORTHO05D006859 8.3e-51 205.3 384 37.2
Nitab4.5_0000818g0090 Nicotiana tabacum HOM05D004848 ORTHO05D006859 1.1e-50 204.9 403 36.2
PSO675G2729 Papaver somniferum HOM05D004848 ORTHO05D006859 1.4e-50 204.5 386 38.1
AUR62024532 Chenopodium quinoa HOM05D004848 ORTHO05D006859 7.0e-50 202.2 392 37.2
Medtr4g084060 Medicago truncatula HOM05D004848 ORTHO05D006859 1.6e-49 201.1 366 38.5
Hund22216 Selenicereus undatus HOM05D004848 ORTHO05D006859 1.6e-49 201.1 462 33.3
Psat7g130520 Pisum sativum HOM05D004848 ORTHO05D006859 2.0e-49 200.7 376 38.3
Nn7g38150 Nelumbo nucifera HOM05D004848 ORTHO05D006859 5.9e-49 199.1 523 33.1
arahy.Tifrunner.gnm1.ann1.4Z5NYX Arachis hypogaea HOM05D004848 ORTHO05D006859 6.5e-48 195.7 428 35.3
arahy.Tifrunner.gnm1.ann1.84J3B2 Arachis hypogaea HOM05D004848 ORTHO05D006859 9.5e-47 191.8 428 35.3
Aqoxy1G01449 Aquilegia oxysepala HOM05D004848 ORTHO05D006859 8.0e-46 188.7 369 35.5
Os07g0567300 Oryza sativa ssp. japonica HOM05D004848 ORTHO05D006859 1.4e-45 188.0 320 38.4
Glyma.20G020100 Glycine max HOM05D004848 ORTHO05D006859 6.8e-45 185.7 440 33.6
AUR62022464 Chenopodium quinoa HOM05D004848 ORTHO05D006859 8.8e-45 185.3 391 35.8
Ca_18763_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 2.0e-44 184.1 369 36.6
Lalb_Chr03g0024651 Lupinus albus HOM05D004848 ORTHO05D006859 7.5e-44 182.2 278 40.6
CDE02G3340 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 1.7e-43 181.0 479 30.5
Zm00001eb324590 Zea mays HOM05D004848 ORTHO05D006859 1.8e-42 177.6 336 36.9
HPP92_015950 Vanilla planifolia HOM05D004848 ORTHO05D006859 3.5e-41 173.3 330 36.7
QL11p016422 Quercus lobata HOM05D004848 ORTHO05D006859 1.3e-40 171.4 421 32.3
arahy.Tifrunner.gnm1.ann1.RCL750 Arachis hypogaea HOM05D004848 ORTHO05D006859 3.8e-40 169.9 214 45.3
ATR0763G002 Amborella trichopoda HOM05D004848 ORTHO05D006859 1.9e-39 167.5 367 33.0
TPR.G17182 Trifolium pratense HOM05D004848 ORTHO05D006859 1.9e-39 167.5 250 38.4
Medtr4g075580 Medicago truncatula HOM05D004848 ORTHO05D006859 5.6e-39 166.0 260 38.5
MBI18_g11477_MAGBIO Magnolia biondii HOM05D004848 ORTHO05D006859 3.0e-37 160.2 468 30.1
TPR.G20986 Trifolium pratense HOM05D004848 ORTHO05D006859 8.9e-37 158.7 226 43.8
Phvul.011G025900 Phaseolus vulgaris HOM05D004848 ORTHO05D006859 1.2e-36 158.3 254 37.8
Glyma.11G097851 Glycine max HOM05D004848 ORTHO05D006859 3.4e-36 156.8 253 38.7
CDE05G1435 Ceratophyllum demersum HOM05D004848 ORTHO05D006859 7.5e-36 155.6 299 36.5
EL10Ac2g03656 Beta vulgaris HOM05D004848 ORTHO05D006859 8.3e-35 152.1 266 39.1
AUR62003215 Chenopodium quinoa HOM05D004848 ORTHO05D006859 1.1e-34 151.8 263 38.0
Ca_08517_v3 Cicer arietinum L. HOM05D004848 ORTHO05D006859 1.4e-34 151.4 255 35.7
VMungo1127G1128 Vigna mungo HOM05D004848 ORTHO05D006859 5.4e-34 149.4 248 37.1
AUR62008037 Chenopodium quinoa HOM05D004848 ORTHO05D006859 1.6e-33 147.9 262 37.0
Ah.02g126290 Amaranthus hybridus HOM05D004848 ORTHO05D006859 3.0e-32 143.7 269 37.5
Psat7g178040 Pisum sativum HOM05D004848 ORTHO05D006859 1.5e-31 141.4 243 36.2
Glyma.07G221700 Glycine max HOM05D004848 ORTHO05D006859 1.7e-24 117.9 290 32.8
SEGI_06238 Sequoiadendron giganteum HOM05D004848 ORTHO05D006859 7.3e-23 112.5 162 41.4
TWI63G1813 Tripterygium wilfordii HOM05D004848 ORTHO05D006859 6.2e-22 109.4 155 43.9
AagrBONN_evm.TU.Sc2ySwM_344.2562 Anthoceros agrestis HOM05D004848 ORTHO05D006859 1.3e-16 91.7 390 23.3
ECA238G4765 Erigeron canadensis HOM05D004848 ORTHO05D006859 2.3e-16 90.9 388 26.5
Mapoly0045s0054 Marchantia polymorpha HOM05D004848 ORTHO05D006859 4.0e-13 80.1 314 27.1
SMO169G0101 Selaginella moellendorffii HOM05D004848 ORTHO05D006859 6.4e-11 72.8 243 29.2
Pp3c6_8960 Physcomitrium patens HOM05D004848 ORTHO05D006859 3.2e-10 70.5 269 29.0
arahy.Tifrunner.gnm1.ann1.DSI1DH Arachis hypogaea HOM05D004848 ORTHO05D006859 1.5e-07 61.6 188 30.3


User provided reference genes

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