Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 0.0e+00 1509.6 773 100.0
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 2.8e-138 496.9 790 44.2
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 2.7e-125 453.8 844 40.9
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 2.3e-116 424.1 841 38.6
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 1.8e-113 414.5 826 37.9
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 5.7e-107 392.9 789 39.4
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 8.6e-103 379.0 809 37.3
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 2.6e-99 367.5 772 38.1
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 5.7e-99 366.3 802 36.7
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 8.3e-98 362.5 778 37.0
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 7.0e-97 359.4 768 37.0
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 5.6e-94 349.7 751 37.9
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 3.7e-90 337.0 805 35.2
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.0e-87 327.4 789 35.9
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 3.0e-87 327.4 795 36.2
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 5.0e-87 326.6 800 35.5
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 6.6e-87 326.2 674 38.6
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 4.3e-86 323.6 844 35.0
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 7.5e-83 312.8 803 34.9
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 2.9e-82 310.8 801 33.8
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 5.6e-78 296.6 773 35.2
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 1.8e-76 291.6 828 32.4
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.3e-76 291.2 766 35.4
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 1.2e-75 288.9 851 31.1
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 1.2e-75 288.9 860 31.5
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 1.5e-75 288.5 848 31.2
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 9.9e-75 285.8 844 32.5
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 9.9e-75 285.8 829 31.4
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 1.7e-74 285.0 793 32.0
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.9e-74 284.3 853 31.3
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.1e-73 282.3 852 31.1
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 5.4e-73 280.0 796 32.0
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 7.1e-73 279.6 798 31.7
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 8.6e-71 272.7 815 32.1
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 8.1e-69 266.2 788 30.7
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 7.6e-67 259.6 803 31.4
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 2.2e-66 258.1 793 31.7
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 2.9e-66 257.7 793 31.1
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 3.8e-66 257.3 809 31.8
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 1.4e-65 255.4 800 30.0
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 7.8e-64 249.6 790 31.4
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 1.0e-63 249.2 772 31.1
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 5.1e-63 246.9 810 30.9
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 9.6e-62 242.7 924 29.9
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 1.4e-60 238.8 809 30.9
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 9.9e-59 232.6 798 32.3
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 3.8e-58 230.7 583 35.3
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 4.2e-57 227.3 776 30.9
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 1.0e-55 222.6 801 29.3
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 5.6e-54 216.9 764 31.0
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 9.6e-54 216.1 795 27.9
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 1.3e-53 215.7 939 29.1
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 2.1e-53 214.9 802 29.4
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 8.1e-53 213.0 755 29.8
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 1.1e-52 212.6 791 27.7
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 1.1e-52 212.6 915 28.1
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 4.0e-52 210.7 813 29.6
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 5.3e-52 210.3 839 29.0
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 5.3e-52 210.3 787 29.9
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 1.5e-51 208.8 794 28.6
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 2.0e-51 208.4 799 28.7
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 5.8e-51 206.8 772 29.8
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 9.9e-51 206.1 817 29.0
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 1.7e-50 205.3 834 29.7
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 5.4e-49 200.3 797 28.2
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 6.0e-48 196.8 891 27.3
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 2.3e-47 194.9 771 27.5
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 5.1e-47 193.7 825 27.6
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 8.7e-47 193.0 823 28.1
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 3.3e-46 191.0 878 27.3
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 5.6e-46 190.3 793 27.6
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 1.6e-45 188.7 890 26.2
TWI23G0760 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 4.8e-45 187.2 533 33.4
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 1.4e-44 185.7 818 27.5
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 2.4e-44 184.9 615 31.2
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 9.0e-44 183.0 807 26.5
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 4.5e-43 180.6 577 29.3
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 1.0e-42 179.5 763 28.0
CiPaw.07G126300 Carya illinoinensis HOM05D005434 ORTHO05D006412 2.2e-42 178.3 620 31.1
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 2.9e-42 177.9 790 28.4
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 1.9e-41 175.3 781 28.6
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 7.1e-41 173.3 811 27.7
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 7.1e-41 173.3 800 26.4
CSS0010810 Camellia sinensis var. sinensis HOM05D005434 ORTHO05D006412 4.6e-40 170.6 575 32.3
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 4.6e-40 170.6 797 25.8
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 7.9e-40 169.9 843 25.6
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 1.3e-39 169.1 731 29.7
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 1.3e-39 169.1 800 26.0
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 3.9e-39 167.5 786 26.3
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 8.7e-39 166.4 876 25.9
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 1.5e-38 165.6 811 25.5
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 1.5e-38 165.6 805 26.5
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 9.6e-38 162.9 142 57.7
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 4.1e-36 157.5 762 28.0
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 2.6e-35 154.8 771 27.5
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 1.0e-34 152.9 158 53.2
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 2.2e-34 151.8 803 25.8
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 3.8e-34 151.0 131 58.8
Lj1A7T44 Lonicera japonica HOM05D005434 ORTHO05D006412 9.3e-33 146.4 516 31.2
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 2.2e-29 135.2 146 49.3
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 8.2e-29 133.3 115 57.4
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 1.4e-28 132.5 109 60.6
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 7.7e-27 126.7 893 25.1
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 9.4e-25 119.8 682 24.6
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 2.7e-24 118.2 99 60.6
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 6.1e-24 117.1 470 27.9
HPP92_011320 Vanilla planifolia HOM05D005434 ORTHO05D006412 1.8e-23 115.5 859 24.8
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 2.3e-23 115.2 160 41.2
BcaB07g33880 Brassica carinata HOM05D005434 ORTHO05D006412 9.7e-22 109.8 339 29.2
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 2.2e-21 108.6 690 26.4
Lalb_Chr02g0147191 Lupinus albus HOM05D005434 ORTHO05D006412 2.8e-21 108.2 585 26.8
arahy.Tifrunner.gnm1.ann1.9BA1LG Arachis hypogaea HOM05D005434 ORTHO05D006412 3.7e-21 107.8 651 26.4
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 4.7e-16 90.9 149 35.6
SEGI_30180 Sequoiadendron giganteum HOM05D005434 ORTHO05D006412 7.0e-12 77.0 152 30.9
Dinv33187 Davidia involucrata HOM05D005434 ORTHO05D006412 9.1e-12 76.6 139 39.6
Actinidia25873 Actinidia chinensis HOM05D005434 ORTHO05D006412 6.5e-10 70.5 628 23.2
Mapoly0021s0152 Marchantia polymorpha HOM05D022252 ORTHO05D006412 2.7e-08 65.1 135 25.2
Pp3c2_29340 Physcomitrium patens HOM05D022252 ORTHO05D006412 1.0e-07 63.2 152 25.7
BcaC01g05050 Brassica carinata HOM05D005434 ORTHO05D006412 8.8e-07 60.1 84 40.5
PGSC0003DMG400023095 Solanum tuberosum HOM05D005434 ORTHO05D007977 2.0e-06 58.9 85 37.6
SMO367G0284 Selaginella moellendorffii HOM05D022252 ORTHO05D006993 3.3e-06 58.2 150 25.3
FAN12G4172 Fragaria x ananassa HOM05D005434 ORTHO05D006412 5.7e-06 57.4 128 31.2


User provided reference genes

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