Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33967 Sapria himalayana HOM05D002864 ORTHO05D007972 1.0e-128 463.4 228 100.0
Aa31csc705G10 Aethionema arabicum HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
AT2G07727 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
ATMG00220 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
A04p09430 Brassica napus HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
BolSC28t60373H Brassica oleracea HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
BraSC48t46333Z Brassica rapa HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
Thhalv10001270m.g Eutrema salsugineum HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
Sp3g25700 Schrenkiella parvula HOM05D002864 ORTHO05D007972 3.8e-67 258.8 189 69.3
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 1.2e-65 253.8 189 68.8
SHI26646 Sapria himalayana HOM05D002864 ORTHO05D007972 1.6e-65 253.4 189 69.3
RcHm_v2.0_MTg0499071 Rosa chinensis HOM05D002864 ORTHO05D007972 2.1e-65 253.1 189 68.3
SabraMtG0009000 Salix brachista HOM05D002864 ORTHO05D007972 2.1e-65 253.1 189 67.7
unitig_87.g28007 Utricularia gibba HOM05D002864 ORTHO05D007972 2.1e-65 253.1 189 68.3
arahy.Tifrunner.gnm1.ann1.BSNJ2C Arachis hypogaea HOM05D002864 ORTHO05D007972 2.7e-65 252.7 189 68.8
Sed0001516 Sechium edule HOM05D002864 ORTHO05D007972 2.7e-65 252.7 189 68.8
TPR.G36555 Trifolium pratense HOM05D002864 ORTHO05D007972 2.7e-65 252.7 189 68.3
Ah.10g028190 Amaranthus hybridus HOM05D002864 ORTHO05D007972 4.7e-65 251.9 189 68.3
Ah.10g028740 Amaranthus hybridus HOM05D002864 ORTHO05D007972 4.7e-65 251.9 189 68.3
CANSAT16G0027 Cannabis sativa HOM05D002864 ORTHO05D007972 6.1e-65 251.5 189 68.3
CsaV3_UNG209910 Cucumis sativus L. HOM05D002864 ORTHO05D007972 6.1e-65 251.5 189 67.7
Gorai.001G162000 Gossypium raimondii HOM05D002864 ORTHO05D007972 6.1e-65 251.5 189 68.3
CAN.G1321.7 Capsicum annuum HOM05D002864 ORTHO05D007972 7.9e-65 251.1 189 68.3
CAN.G539.2 Capsicum annuum HOM05D002864 ORTHO05D007972 7.9e-65 251.1 189 68.3
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 7.9e-65 251.1 189 68.3
Sopen01g028720 Solanum pennellii HOM05D002864 ORTHO05D007972 7.9e-65 251.1 189 68.3
VMungo0647G2443 Vigna mungo HOM05D002864 ORTHO05D007972 7.9e-65 251.1 189 68.8
arahy.Tifrunner.gnm1.ann1.76QWAA Arachis hypogaea HOM05D002864 ORTHO05D007972 1.0e-64 250.8 189 68.3
arahy.Tifrunner.gnm1.ann1.L9JJXJ Arachis hypogaea HOM05D002864 ORTHO05D007972 1.0e-64 250.8 189 68.3
arahy.Tifrunner.gnm1.ann1.N2KMKI Arachis hypogaea HOM05D002864 ORTHO05D007972 1.0e-64 250.8 189 68.3
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 1.0e-64 250.8 189 68.3
LjContig00439g0009771 Lotus japonicus HOM05D002864 ORTHO05D007972 1.0e-64 250.8 189 68.3
LjContig00446g0017432 Lotus japonicus HOM05D002864 ORTHO05D007972 1.0e-64 250.8 189 68.3
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.0e-64 250.8 189 68.3
Lalb_Chr00c06g0404551 Lupinus albus HOM05D002864 ORTHO05D007972 8.8e-64 247.7 189 67.2
Lalb_Chr00c21g0405421 Lupinus albus HOM05D002864 ORTHO05D007972 8.8e-64 247.7 189 67.2
Lalb_Chr00c24g0407141 Lupinus albus HOM05D002864 ORTHO05D007972 8.8e-64 247.7 189 67.2
Lalb_Chr11g0070121 Lupinus albus HOM05D002864 ORTHO05D007972 8.8e-64 247.7 189 67.2
Lsat_1_v5_gn_0_44400 Lactuca sativa HOM05D002864 ORTHO05D007972 1.3e-62 243.8 189 67.7
Lj2C1221T24 Lonicera japonica HOM05D002864 ORTHO05D007972 1.7e-62 243.4 189 67.2
Peaxi162Scf00296g00719 Petunia axillaris HOM05D002864 ORTHO05D007972 1.7e-62 243.4 198 65.2
Zm00001eb126090 Zea mays HOM05D002864 ORTHO05D007972 2.2e-62 243.0 189 66.7
Zm00001eb187520 Zea mays HOM05D002864 ORTHO05D007972 2.2e-62 243.0 189 66.7
Zm00001eb436400 Zea mays HOM05D002864 ORTHO05D007972 2.2e-62 243.0 189 66.7
Zm00001eb438850 Zea mays HOM05D002864 ORTHO05D007972 2.2e-62 243.0 189 66.7
Zm00001eb440640 Zea mays HOM05D002864 ORTHO05D007972 2.2e-62 243.0 189 66.7
HanXRQChr00c0055g0571421 Helianthus annuus HOM05D002864 ORTHO05D007972 3.1e-61 239.2 189 66.7
HanXRQMTg0579511 Helianthus annuus HOM05D002864 ORTHO05D007972 3.1e-61 239.2 189 66.7
HanXRQChr17g0558551 Helianthus annuus HOM05D002864 ORTHO05D007972 1.2e-60 237.3 189 65.6
Gohir.A01G126732 Gossypium hirsutum HOM05D002864 ORTHO05D007972 1.5e-60 236.9 189 65.1
Nn1g09936 Nelumbo nucifera HOM05D002864 ORTHO05D007972 5.9e-60 235.0 189 66.1
Nn1g10178 Nelumbo nucifera HOM05D002864 ORTHO05D007972 5.9e-60 235.0 189 66.1
Glyma.05G092000 Glycine max HOM05D002864 ORTHO05D007972 1.3e-59 233.8 189 65.1
CDE02G2259 Ceratophyllum demersum HOM05D002864 ORTHO05D007972 5.5e-58 228.4 189 65.1
Nitab4.5_0024895g0020 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.2e-57 227.3 184 65.8
DCAR_032458 Daucus carota HOM05D002864 ORTHO05D007972 6.1e-57 224.9 189 62.4
Nitab4.5_0000120g0110 Nicotiana tabacum HOM05D002864 ORTHO05D007972 6.7e-56 221.5 189 61.9
SEGI_33420 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 6.5e-51 204.9 189 60.3
BraSC159t45732Z Brassica rapa HOM05D002864 ORTHO05D007972 1.0e-48 197.6 161 65.2
SEGI_14242 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 2.3e-48 196.4 189 58.2
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 4.5e-44 182.2 221 49.8
SEGI_20307 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 5.5e-42 175.3 178 54.5
Psat1g132320 Pisum sativum HOM05D004291 ORTHO05D007972 6.1e-41 171.8 152 59.9
CAN.G124.9 Capsicum annuum HOM05D002864 ORTHO05D007972 3.4e-39 166.0 146 58.9
CAN.G1.12 Capsicum annuum HOM05D002864 ORTHO05D007972 4.9e-38 162.2 142 59.9
SHI26668 Sapria himalayana HOM05D002864 ORTHO05D007972 6.3e-38 161.8 172 52.3
Solyc09g050020.3 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.5e-36 156.0 122 68.9
Haze_27081 Corylus avellana HOM05D002864 ORTHO05D007972 6.6e-35 151.8 193 45.1
BcaB04g20322 Brassica carinata HOM05D002864 ORTHO05D007972 8.6e-35 151.4 170 51.8
Solyc00g500240.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.0e-32 144.4 126 59.5
Solyc00g500364.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.0e-32 144.4 126 59.5
ClCG09G013010 Citrullus lanatus HOM05D002864 ORTHO05D007972 3.4e-31 139.4 126 56.3
Psat6g041400 Pisum sativum HOM05D002864 ORTHO05D007972 5.9e-28 128.6 81 79.0
SEGI_39586 Sequoiadendron giganteum HOM05D002864 ORTHO05D007972 5.0e-27 125.6 146 50.0
ClCG07G004380 Citrullus lanatus HOM05D002864 ORTHO05D007972 5.6e-26 122.1 75 81.3
Nitab4.5_0029129g0010 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.8e-24 117.1 81 74.1
SMO053G0012 Selaginella moellendorffii HOM05D002864 ORTHO05D007972 1.1e-21 107.8 188 39.9
CAN.G358.146 Capsicum annuum HOM05D002864 ORTHO05D007972 1.1e-18 97.8 182 36.3
Psat1g132440 Pisum sativum HOM05D002864 ORTHO05D007972 3.6e-17 92.8 53 86.8
Phvul.003G168500 Phaseolus vulgaris HOM05D002864 ORTHO05D007972 8.1e-17 91.7 62 69.4
GSVIVG01018702001 Vitis vinifera HOM05D002864 ORTHO05D007972 8.1e-17 91.7 55 80.0
SHI06511 Sapria himalayana HOM05D002864 ORTHO05D007972 1.2e-15 87.8 158 39.2
Glyma.07G122200 Glycine max HOM05D002864 ORTHO05D007972 9.2e-13 78.2 54 64.8
CAN.G1542.5 Capsicum annuum HOM05D002864 ORTHO05D007972 1.6e-12 77.4 54 61.1
CAN.G1082.1 Capsicum annuum HOM05D002864 ORTHO05D007972 6.0e-12 75.5 54 61.1
Zm00001eb434710 Zea mays HOM05D002864 ORTHO05D007972 3.9e-11 72.8 54 63.0
CAN.G502.16 Capsicum annuum HOM05D002864 ORTHO05D007972 5.1e-11 72.4 53 62.3
GSVIVG01012279001 Vitis vinifera HOM05D002864 ORTHO05D007972 1.6e-09 67.4 158 31.0
Haze_27639 Corylus avellana HOM05D002864 ORTHO05D007972 2.8e-09 66.6 89 42.7
Lalb_Chr11g0070201 Lupinus albus HOM05D002864 ORTHO05D007972 3.6e-09 66.2 31 93.5
ATR0759G021 Amborella trichopoda HOM05D002864 ORTHO05D007972 2.3e-08 63.5 107 40.2
CAN.G1001.39 Capsicum annuum HOM05D002864 ORTHO05D007972 1.3e-06 57.8 31 80.6
SHI15138 Sapria himalayana HOM05D000003 ORTHO05D365668 2.2e-06 57.0 61 50.8
CAN.G1194.10 Capsicum annuum HOM05D002864 ORTHO05D007972 2.9e-06 56.6 38 71.1
CARHR177290 Cardamine hirsuta HOM05D002864 ORTHO05D007972 3.7e-06 56.2 38 65.8
CAN.G1077.1 Capsicum annuum HOM05D002864 ORTHO05D007972 8.4e-06 55.1 31 74.2


User provided reference genes

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