Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33657 Sapria himalayana HOM05D003430 ORTHO05D004809 2.1e-51 205.3 98 100.0
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 3.7e-19 98.2 149 43.6
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 9.1e-18 93.6 200 36.0
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 2.6e-17 92.0 203 35.5
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 2.6e-17 92.0 199 35.7
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 5.9e-17 90.9 200 36.0
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 7.7e-17 90.5 202 33.7
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 1.7e-16 89.4 199 35.2
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 2.9e-16 88.6 200 35.5
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 2.9e-16 88.6 199 34.7
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 2.9e-16 88.6 172 36.6
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 3.8e-16 88.2 172 36.6
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 3.8e-16 88.2 172 36.6
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 3.8e-16 88.2 172 36.6
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 3.2e-15 85.1 172 36.0
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 4.2e-15 84.7 184 37.0
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 4.2e-15 84.7 183 36.6
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 7.2e-15 84.0 199 33.7
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 9.4e-15 83.6 177 38.4
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 2.1e-14 82.4 172 34.9
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 3.6e-14 81.6 172 34.3
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.3e-13 79.0 188 34.0
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.3e-13 79.0 188 34.0
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 4.0e-13 78.2 193 32.1
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 4.0e-13 78.2 193 32.1
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 6.8e-13 77.4 161 34.8
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 5.7e-12 74.3 189 32.3
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 5.7e-12 74.3 190 32.6
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 5.7e-12 74.3 190 32.6
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 5.7e-12 74.3 190 32.6
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 9.8e-12 73.6 162 31.5
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 9.8e-12 73.6 162 31.5
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.3e-11 73.2 72 54.2
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 1.7e-11 72.8 161 33.5
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 2.8e-11 72.0 167 32.3
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 2.8e-11 72.0 72 51.4
Solyc10g076630.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.8e-11 72.0 44 72.7
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 4.8e-11 71.2 72 54.2
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 4.8e-11 71.2 190 32.1
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 4.8e-11 71.2 190 32.1
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 4.8e-11 71.2 190 32.1
Nitab4.5_0000172g1130 Nicotiana tabacum HOM05D003430 ORTHO05D004809 4.8e-11 71.2 71 52.1
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 6.3e-11 70.9 159 33.3
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 8.3e-11 70.5 72 52.8
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 8.3e-11 70.5 72 52.8
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 1.1e-10 70.1 72 54.2
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.4e-10 69.7 72 52.8
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 1.4e-10 69.7 72 52.8
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 2.4e-10 68.9 91 46.2
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 2.4e-10 68.9 71 53.5
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 3.1e-10 68.6 44 68.2
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 3.1e-10 68.6 162 32.1
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 4.1e-10 68.2 72 51.4
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 4.1e-10 68.2 188 31.4
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 5.4e-10 67.8 44 68.2
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 5.4e-10 67.8 44 68.2
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 5.4e-10 67.8 44 68.2
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 5.4e-10 67.8 44 68.2
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 5.4e-10 67.8 71 52.1
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 5.4e-10 67.8 162 32.1
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 1.6e-09 66.2 44 65.9
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 1.6e-09 66.2 44 65.9
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.7e-09 65.5 45 66.7
SHI25675 Sapria himalayana HOM05D003430 ORTHO05D004809 4.5e-09 64.7 40 67.5
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 2.2e-08 62.4 37 67.6
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.2e-08 62.4 44 63.6
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 2.9e-08 62.0 37 67.6
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 3.8e-08 61.6 44 59.1
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 8.5e-08 60.5 46 65.2
SHI03773 Sapria himalayana HOM05D003430 ORTHO05D004809 8.5e-08 60.5 45 62.2
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 1.5e-07 59.7 62 50.0
Pp3c4_28970 Physcomitrium patens HOM05D003430 ORTHO05D004809 1.9e-07 59.3 58 50.0
Pp3c4_28972 Physcomitrium patens HOM05D003430 ORTHO05D004809 1.9e-07 59.3 58 50.0
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 3.2e-07 58.5 56 57.1
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 8.0e-06 53.9 38 68.4


User provided reference genes

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