Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33624 Sapria himalayana HOM05D003495 ORTHO05D004159 1.1e-209 733.0 350 100.0
QL02p063585 Quercus lobata HOM05D003495 ORTHO05D004159 1.2e-96 357.5 262 67.9
Atru.chr8.588 Acer truncatum HOM05D003495 ORTHO05D004159 1.0e-95 354.4 262 68.3
Manes.01G104801 Manihot esculenta HOM05D003495 ORTHO05D004159 1.0e-95 354.4 259 68.7
Sopen02g034150 Solanum pennellii HOM05D003495 ORTHO05D004159 3.0e-95 352.8 262 68.3
Cfa007716 Carpinus fangiana HOM05D003495 ORTHO05D004159 5.1e-95 352.1 262 67.2
Solyc02g089370.2 Solanum lycopersicum HOM05D003495 ORTHO05D004159 5.1e-95 352.1 262 68.3
Nitab4.5_0002171g0110 Nicotiana tabacum HOM05D003495 ORTHO05D004159 8.7e-95 351.3 262 68.3
Nitab4.5_0002978g0060 Nicotiana tabacum HOM05D003495 ORTHO05D004159 8.7e-95 351.3 262 67.9
Ciclev10010888m.g Citrus clementina HOM05D003495 ORTHO05D004159 1.1e-94 350.9 262 68.3
Peaxi162Scf00020g02133 Petunia axillaris HOM05D003495 ORTHO05D004159 1.1e-94 350.9 262 68.3
Cpa.g.sc14.256 Carica papaya HOM05D003495 ORTHO05D004159 1.9e-94 350.1 262 67.6
Haze_14358 Corylus avellana HOM05D003495 ORTHO05D004159 1.9e-94 350.1 262 67.2
Phvul.004G045000 Phaseolus vulgaris HOM05D003495 ORTHO05D004159 2.5e-94 349.7 256 67.2
Potri.017G106100 Populus trichocarpa HOM05D003495 ORTHO05D004159 4.3e-94 349.0 259 68.3
THA.LOC104820987 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 4.3e-94 349.0 259 69.1
Dinv33880 Davidia involucrata HOM05D003495 ORTHO05D004159 7.3e-94 348.2 262 66.8
CAN.G497.44 Capsicum annuum HOM05D003495 ORTHO05D004159 9.6e-94 347.8 262 67.6
MD09G1077600 Malus domestica HOM05D003495 ORTHO05D004159 9.6e-94 347.8 262 66.4
Dinv34893 Davidia involucrata HOM05D003495 ORTHO05D004159 1.2e-93 347.4 262 66.8
Cc07_g04650 Coffea canephora HOM05D003495 ORTHO05D004159 1.6e-93 347.1 262 66.8
DCAR_011000 Daucus carota HOM05D003495 ORTHO05D004159 1.6e-93 347.1 262 67.2
TAR374G0385 Trochodendron aralioides HOM05D003495 ORTHO05D004159 2.1e-93 346.7 262 66.0
AT5G15680 Arabidopsis thaliana HOM05D003495 ORTHO05D004159 2.8e-93 346.3 259 68.0
TAR622G0597 Trochodendron aralioides HOM05D003495 ORTHO05D004159 3.6e-93 345.9 262 66.0
Ca_20758_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 4.7e-93 345.5 256 67.2
MD17G1067900 Malus domestica HOM05D003495 ORTHO05D004159 4.7e-93 345.5 262 65.6
Sc04g0005950 Simmondsia chinensis HOM05D003495 ORTHO05D004159 4.7e-93 345.5 262 66.4
TWI60G0296 Tripterygium wilfordii HOM05D003495 ORTHO05D004159 6.2e-93 345.1 262 67.2
CARHR197650 Cardamine hirsuta HOM05D003495 ORTHO05D004159 8.1e-93 344.7 259 68.0
Lsat_1_v5_gn_4_173941 Lactuca sativa HOM05D003495 ORTHO05D004159 8.1e-93 344.7 262 66.4
Nn7g37976 Nelumbo nucifera HOM05D003495 ORTHO05D004159 8.1e-93 344.7 259 66.8
Sp6g28440 Schrenkiella parvula HOM05D003495 ORTHO05D004159 8.1e-93 344.7 259 68.3
CANSAT64G2734 Cannabis sativa HOM05D003495 ORTHO05D004159 1.1e-92 344.4 261 65.5
AL6G26520 Arabidopsis lyrata HOM05D003495 ORTHO05D004159 1.4e-92 344.0 259 67.6
ECA232G2419 Erigeron canadensis HOM05D003495 ORTHO05D004159 1.4e-92 344.0 262 66.4
Thhalv10012410m.g Eutrema salsugineum HOM05D003495 ORTHO05D004159 1.4e-92 344.0 259 68.0
Peaxi162Scf00479g01011 Petunia axillaris HOM05D003495 ORTHO05D004159 1.4e-92 344.0 262 66.0
Prupe.3G246500 Prunus persica HOM05D003495 ORTHO05D004159 1.4e-92 344.0 262 65.6
Hma1.2p1_0588F.1_g184640 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 1.8e-92 343.6 257 68.1
Aa31LG11G13890 Aethionema arabicum HOM05D003495 ORTHO05D004159 2.4e-92 343.2 259 67.2
Hund25028 Selenicereus undatus HOM05D003495 ORTHO05D004159 2.4e-92 343.2 262 66.4
SGA_v2.0_scaffold148G36460 Striga asiatica HOM05D003495 ORTHO05D004159 2.4e-92 343.2 262 67.2
Glyma.19G037200 Glycine max HOM05D003495 ORTHO05D004159 3.1e-92 342.8 256 66.4
Oeu062191.1 Olea europaea HOM05D003495 ORTHO05D004159 3.1e-92 342.8 257 67.3
RcHm_v2.0_Chr2g0164371 Rosa chinensis HOM05D003495 ORTHO05D004159 3.1e-92 342.8 262 65.3
HanXRQChr15g0489851 Helianthus annuus HOM05D003495 ORTHO05D004159 4.0e-92 342.4 262 65.6
Lj2g0019402 Lotus japonicus HOM05D003495 ORTHO05D004159 4.0e-92 342.4 256 66.0
Sopen03g010670 Solanum pennellii HOM05D003495 ORTHO05D004159 5.3e-92 342.0 262 66.4
CAN.G563.4 Capsicum annuum HOM05D003495 ORTHO05D004159 6.9e-92 341.7 262 64.9
FAN05G3267 Fragaria x ananassa HOM05D003495 ORTHO05D004159 6.9e-92 341.7 261 65.5
Lj4C126G12 Lonicera japonica HOM05D003495 ORTHO05D004159 6.9e-92 341.7 262 66.4
THA.LOC104802983 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 1.2e-91 340.9 259 68.0
Actinidia18095 Actinidia chinensis HOM05D003495 ORTHO05D004159 2.0e-91 340.1 262 64.9
FAN02G1990 Fragaria x ananassa HOM05D003495 ORTHO05D004159 2.0e-91 340.1 262 66.0
A02p03170 Brassica napus HOM05D003495 ORTHO05D004159 2.6e-91 339.7 259 67.6
BraA02t05287Z Brassica rapa HOM05D003495 ORTHO05D004159 2.6e-91 339.7 259 67.6
Lalb_Chr02g0158651 Lupinus albus HOM05D003495 ORTHO05D004159 2.6e-91 339.7 257 66.5
Medtr6g016215 Medicago truncatula HOM05D003495 ORTHO05D004159 2.6e-91 339.7 256 66.0
FAN09G4792 Fragaria x ananassa HOM05D003495 ORTHO05D004159 3.4e-91 339.3 262 66.0
Solyc03g046450.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 3.4e-91 339.3 262 65.6
Carub.0006s1383 Capsella rubella HOM05D003495 ORTHO05D004159 4.4e-91 339.0 259 66.4
Glyma.11G061700 Glycine max HOM05D003495 ORTHO05D004159 4.4e-91 339.0 256 66.0
VMungo0464G1145 Vigna mungo HOM05D003495 ORTHO05D004159 4.4e-91 339.0 256 66.0
BcaNung02199 Brassica carinata HOM05D003495 ORTHO05D004159 5.8e-91 338.6 259 67.6
ClCG11G005050 Citrullus lanatus HOM05D003495 ORTHO05D004159 5.8e-91 338.6 259 67.2
BcaC03g18444 Brassica carinata HOM05D003495 ORTHO05D004159 7.6e-91 338.2 259 67.6
C02p07920 Brassica napus HOM05D003495 ORTHO05D004159 7.6e-91 338.2 259 67.6
BolC2t06715H Brassica oleracea HOM05D003495 ORTHO05D004159 7.6e-91 338.2 259 67.6
CiPaw.03G081100 Carya illinoinensis HOM05D003495 ORTHO05D004159 1.3e-90 337.4 262 65.3
HanXRQChr15g0464911 Helianthus annuus HOM05D003495 ORTHO05D004159 1.7e-90 337.0 263 65.8
CSS0005441 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 2.2e-90 336.7 254 67.3
FvH4_6g46050 Fragaria vesca HOM05D003495 ORTHO05D004159 2.2e-90 336.7 262 65.3
FAN14G1484 Fragaria x ananassa HOM05D003495 ORTHO05D004159 2.2e-90 336.7 262 65.3
FAN14G3604 Fragaria x ananassa HOM05D003495 ORTHO05D004159 2.2e-90 336.7 262 65.3
Sed0015478 Sechium edule HOM05D003495 ORTHO05D004159 2.2e-90 336.7 262 65.3
CSS0004216 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 3.8e-90 335.9 262 65.3
MELO3C022060.2 Cucumis melo HOM05D003495 ORTHO05D004159 3.8e-90 335.9 262 65.6
RcHm_v2.0_Chr2g0117981 Rosa chinensis HOM05D003495 ORTHO05D004159 3.8e-90 335.9 262 64.1
Sed0005421 Sechium edule HOM05D003495 ORTHO05D004159 3.8e-90 335.9 262 65.3
TPR.G15949 Trifolium pratense HOM05D003495 ORTHO05D004159 4.9e-90 335.5 256 65.6
Migut.K00878 Erythranthe guttata HOM05D003495 ORTHO05D004159 8.4e-90 334.7 262 66.8
CsaV3_5G038800 Cucumis sativus L. HOM05D003495 ORTHO05D004159 1.1e-89 334.3 262 65.3
COL.COLO4_24186 Corchorus olitorius HOM05D003495 ORTHO05D004159 1.4e-89 334.0 262 66.0
MSTRG.3380 Avicennia marina HOM05D003495 ORTHO05D004159 1.9e-89 333.6 262 66.0
Aqoxy5G03432 Aquilegia oxysepala HOM05D003495 ORTHO05D004159 3.2e-89 332.8 262 63.4
Psat1g064160 Pisum sativum HOM05D003495 ORTHO05D004159 3.2e-89 332.8 256 64.8
EL10Ac6g14290 Beta vulgaris HOM05D003495 ORTHO05D004159 5.4e-89 332.0 262 64.5
BraA03t10052Z Brassica rapa HOM05D003495 ORTHO05D004159 5.4e-89 332.0 264 65.2
PGR004G1253 Punica granatum HOM05D003495 ORTHO05D004159 5.4e-89 332.0 262 64.5
Thecc.02G251800 Theobroma cacao HOM05D003495 ORTHO05D004159 7.1e-89 331.6 262 65.6
arahy.Tifrunner.gnm1.ann1.AQF1TQ Arachis hypogaea HOM05D003495 ORTHO05D004159 9.3e-89 331.3 257 65.4
AUR62014105 Chenopodium quinoa HOM05D003495 ORTHO05D004159 1.6e-88 330.5 262 65.3
A03p07290 Brassica napus HOM05D003495 ORTHO05D004159 2.1e-88 330.1 262 65.3
BolC3t13343H Brassica oleracea HOM05D003495 ORTHO05D004159 7.8e-88 328.2 264 64.4
AUR62002798 Chenopodium quinoa HOM05D003495 ORTHO05D004159 1.0e-87 327.8 262 64.5
C03p08360 Brassica napus HOM05D003495 ORTHO05D004159 3.0e-87 326.2 262 64.5
Ah.02g128180 Amaranthus hybridus HOM05D003495 ORTHO05D004159 5.1e-87 325.5 262 64.5
Duzib248G1077 Durio zibethinus HOM05D003495 ORTHO05D004159 8.7e-87 324.7 262 64.5
Gohir.A01G142600 Gossypium hirsutum HOM05D003495 ORTHO05D004159 1.1e-86 324.3 261 63.6
Gorai.002G166500 Gossypium raimondii HOM05D003495 ORTHO05D004159 1.1e-86 324.3 261 63.2
Gohir.A03G138900 Gossypium hirsutum HOM05D003495 ORTHO05D004159 1.5e-86 323.9 262 64.5
Gohir.D01G134500 Gossypium hirsutum HOM05D003495 ORTHO05D004159 1.5e-86 323.9 261 62.8
Gorai.005G181800 Gossypium raimondii HOM05D003495 ORTHO05D004159 1.5e-86 323.9 262 64.5
CSS0018508 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 3.3e-86 322.8 261 64.4
vmacro05603 Vaccinium macrocarpon HOM05D003495 ORTHO05D004159 4.3e-86 322.4 262 63.7
Eucgr.I02084 Eucalyptus grandis HOM05D003495 ORTHO05D004159 7.3e-86 321.6 262 61.8
Hund20735 Selenicereus undatus HOM05D003495 ORTHO05D004159 7.3e-86 321.6 262 64.5
ATR0618G126 Amborella trichopoda HOM05D003495 ORTHO05D004159 2.1e-85 320.1 257 63.0
unitig_748.g7269 Utricularia gibba HOM05D003495 ORTHO05D004159 1.4e-84 317.4 259 64.5
Duzib268G1709 Durio zibethinus HOM05D003495 ORTHO05D004159 4.0e-84 315.8 263 63.5
PSO063G7059 Papaver somniferum HOM05D003495 ORTHO05D004159 4.0e-84 315.8 263 62.4
HPP92_025565 Vanilla planifolia HOM05D003495 ORTHO05D004159 2.0e-83 313.5 257 60.3
Lsat_1_v5_gn_2_85980 Lactuca sativa HOM05D003495 ORTHO05D004159 2.4e-81 306.6 262 61.5
BcaB01g05032 Brassica carinata HOM05D003495 ORTHO05D004159 2.7e-80 303.1 259 62.5
Zm00001eb190620 Zea mays HOM05D003495 ORTHO05D004159 6.0e-80 302.0 256 57.4
HanXRQChr14g0447961 Helianthus annuus HOM05D003495 ORTHO05D004159 1.3e-79 300.8 260 60.8
CDE04G3053 Ceratophyllum demersum HOM05D003495 ORTHO05D004159 1.1e-78 297.7 261 59.8
Gohir.D02G161860 Gossypium hirsutum HOM05D003495 ORTHO05D004159 1.9e-78 297.0 245 63.3
ECA238G4655 Erigeron canadensis HOM05D003495 ORTHO05D004159 4.3e-78 295.8 257 60.7
Mapoly0124s0011 Marchantia polymorpha HOM05D003495 ORTHO05D004159 2.4e-76 290.0 263 54.8
PSO063G5616 Papaver somniferum HOM05D003495 ORTHO05D004159 5.8e-75 285.4 258 57.8
SEGI_22880 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 3.8e-74 282.7 259 55.6
SMO351G0561 Selaginella moellendorffii HOM05D003495 ORTHO05D004159 1.1e-70 271.2 258 52.3
AagrBONN_evm.TU.Sc2ySwM_228.311 Anthoceros agrestis HOM05D003495 ORTHO05D004159 7.4e-70 268.5 259 52.9
Pp3c3_1860 Physcomitrium patens HOM05D003495 ORTHO05D004159 1.0e-66 258.1 262 50.8
Pp3c12_3160 Physcomitrium patens HOM05D003495 ORTHO05D004159 6.5e-66 255.4 265 49.1
Pp3c13_5370 Physcomitrium patens HOM05D003495 ORTHO05D004159 1.2e-64 251.1 265 48.7
GSVIVG01036514001 Vitis vinifera HOM05D003495 ORTHO05D004159 1.0e-55 221.5 261 49.0
Oeu032840.1 Olea europaea HOM05D003495 ORTHO05D004159 2.0e-54 217.2 256 49.2
CBR_g31516 Chara braunii HOM05D003495 ORTHO05D004159 1.9e-49 200.7 263 42.2
Actinidia36278 Actinidia chinensis HOM05D003495 ORTHO05D004159 1.5e-38 164.5 123 64.2
Nitab4.5_0001397g0040 Nicotiana tabacum HOM05D003495 ORTHO05D004159 3.7e-21 106.7 78 67.9
CAN.G497.62 Capsicum annuum HOM05D003495 ORTHO05D004159 4.4e-06 56.6 52 61.5


User provided reference genes

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