Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33547 Sapria himalayana HOM05D005166 ORTHO05D006120 7.4e-110 400.6 207 100.0
SHI31247 Sapria himalayana HOM05D005166 ORTHO05D006120 1.1e-84 317.0 225 77.3
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 2.6e-78 295.8 209 77.5
SHI25075 Sapria himalayana HOM05D005166 ORTHO05D006120 9.1e-60 234.2 197 68.5
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 2.8e-48 196.1 197 56.3
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 8.0e-48 194.5 192 57.8
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 8.0e-48 194.5 198 57.1
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 2.3e-47 193.0 208 52.9
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 2.6e-46 189.5 192 57.8
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 5.7e-46 188.3 197 55.8
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 5.7e-46 188.3 198 55.6
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 7.5e-46 188.0 191 55.5
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 2.2e-45 186.4 198 53.5
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 3.7e-45 185.7 190 56.8
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 4.1e-44 182.2 198 54.5
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 7.0e-44 181.4 197 53.3
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 2.7e-43 179.5 194 54.6
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 2.7e-43 179.5 194 54.6
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 2.7e-43 179.5 208 51.4
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 3.5e-43 179.1 191 54.5
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 5.9e-43 178.3 195 53.8
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 1.3e-42 177.2 194 54.1
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 2.3e-42 176.4 198 50.5
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 2.9e-42 176.0 198 52.0
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 3.8e-42 175.6 147 63.3
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 5.0e-42 175.3 209 50.2
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 1.1e-41 174.1 198 52.5
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 1.1e-41 174.1 204 51.0
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 1.5e-41 173.7 194 53.1
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 2.5e-41 172.9 195 54.9
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 3.3e-41 172.6 214 47.7
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 4.3e-41 172.2 194 53.1
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 1.2e-40 170.6 200 52.0
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 1.6e-40 170.2 198 50.5
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 1.6e-40 170.2 198 51.0
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 3.6e-40 169.1 194 51.0
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 3.6e-40 169.1 197 51.3
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 4.7e-40 168.7 198 49.5
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 8.0e-40 167.9 147 61.9
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 8.0e-40 167.9 197 51.8
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 1.0e-39 167.5 186 52.2
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 1.4e-39 167.2 212 46.7
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 1.4e-39 167.2 197 50.8
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 1.8e-39 166.8 212 47.6
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 2.3e-39 166.4 194 52.1
Sed0000001 Sechium edule HOM05D005166 ORTHO05D006120 3.0e-39 166.0 169 57.4
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 4.0e-39 165.6 212 46.7
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 5.2e-39 165.2 195 50.3
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 6.8e-39 164.9 147 59.2
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 6.8e-39 164.9 190 51.1
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 6.8e-39 164.9 189 52.4
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 6.8e-39 164.9 204 49.5
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 8.9e-39 164.5 189 51.3
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 8.9e-39 164.5 199 51.3
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 1.2e-38 164.1 212 48.1
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 1.2e-38 164.1 208 47.1
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 1.2e-38 164.1 192 50.5
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 1.5e-38 163.7 200 49.5
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.5e-38 163.7 201 50.7
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.4e-38 162.5 167 53.9
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 4.4e-38 162.2 209 46.9
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 4.4e-38 162.2 150 58.7
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 5.8e-38 161.8 185 51.4
SHI07724 Sapria himalayana HOM05D005166 ORTHO05D006120 5.8e-38 161.8 139 67.6
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 9.8e-38 161.0 189 51.9
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 1.3e-37 160.6 198 49.0
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 1.3e-37 160.6 198 48.5
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.3e-37 160.6 201 49.8
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 1.7e-37 160.2 194 49.5
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 1.7e-37 160.2 167 53.9
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 4.9e-37 158.7 195 48.7
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 6.4e-37 158.3 189 51.9
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 6.4e-37 158.3 197 49.7
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 1.1e-36 157.5 145 59.3
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 1.1e-36 157.5 145 59.3
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 1.9e-36 156.8 193 47.7
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 2.4e-36 156.4 135 60.7
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 4.1e-36 155.6 199 48.2
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 4.1e-36 155.6 147 57.8
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 7.0e-36 154.8 131 61.1
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 9.2e-36 154.5 184 51.6
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 1.2e-35 154.1 189 50.3
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 1.6e-35 153.7 185 49.7
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 2.7e-35 152.9 201 48.3
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.5e-35 152.5 147 59.2
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.5e-35 152.5 147 59.2
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 7.8e-35 151.4 131 64.1
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 1.0e-34 151.0 190 47.9
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.3e-34 150.6 201 47.8
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 1.7e-34 150.2 201 47.8
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 2.3e-34 149.8 134 60.4
SHI32778 Sapria himalayana HOM05D005166 ORTHO05D006120 3.9e-34 149.1 119 70.6
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 6.6e-34 148.3 131 59.5
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 1.1e-33 147.5 174 51.1
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 5.6e-33 145.2 133 59.4
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 5.6e-33 145.2 186 49.5
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 9.5e-33 144.4 197 48.7
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 9.5e-33 144.4 197 48.7
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 9.5e-33 144.4 152 54.6
SHI29822 Sapria himalayana HOM05D005166 ORTHO05D006120 9.5e-33 144.4 88 87.5
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 1.2e-32 144.1 151 54.3
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 1.2e-32 144.1 151 54.3
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 1.6e-32 143.7 188 46.8
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 1.6e-32 143.7 198 46.5
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 1.6e-32 143.7 117 61.5
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 2.1e-32 143.3 194 45.4
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 4.7e-32 142.1 151 53.0
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 4.7e-32 142.1 198 48.0
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 1.1e-31 141.0 195 44.1
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 1.1e-31 141.0 197 46.2
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 1.1e-31 141.0 118 63.6
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 2.3e-31 139.8 195 46.2
unitig_746.g26715 Utricularia gibba HOM05D005166 ORTHO05D006120 4.0e-31 139.0 172 45.9
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 2.0e-30 136.7 201 46.8
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 4.4e-30 135.6 194 46.9
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 4.1e-28 129.0 115 56.5
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 1.6e-27 127.1 147 49.0
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 5.1e-26 122.1 187 40.6
BcaB05g22029 Brassica carinata HOM05D005166 ORTHO05D006120 8.6e-26 121.3 153 48.4
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 1.8e-23 113.6 157 45.9
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 5.2e-23 112.1 134 48.5
Actinidia33768 Actinidia chinensis HOM05D005166 ORTHO05D006120 1.3e-21 107.5 152 48.0
MCO11G283 Micromonas commoda HOM05D005166 ORTHO05D006120 2.5e-17 93.2 143 38.5
Zm00001eb397830 Zea mays HOM05D005166 ORTHO05D006120 8.9e-15 84.7 88 58.0
Zm00001eb284680 Zea mays HOM05D005166 ORTHO05D006120 7.1e-12 75.1 82 56.1
Zm00001eb222410 Zea mays HOM05D005166 ORTHO05D006120 1.3e-10 70.9 61 59.0
Cre16.g678050 Chlamydomonas reinhardtii HOM05D005166 ORTHO05D006120 3.9e-10 69.3 140 32.9


User provided reference genes

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