Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33433 Sapria himalayana HOM05D001249 ORTHO05D021216 1.1e-67 259.6 115 100.0
SHI53195 Sapria himalayana HOM05D001249 ORTHO05D003440 2.6e-24 115.5 66 75.8
SHI44366 Sapria himalayana HOM05D001249 ORTHO05D003440 7.6e-24 114.0 66 74.2
SHI45532 Sapria himalayana HOM05D001249 ORTHO05D003440 6.1e-13 77.8 60 56.7
SHI33715 Sapria himalayana HOM05D001249 ORTHO05D003440 1.8e-12 76.3 40 77.5
SHI53497 Sapria himalayana HOM05D001249 ORTHO05D003440 3.0e-12 75.5 92 44.6
SHI28419 Sapria himalayana HOM05D001249 ORTHO05D003440 4.3e-11 71.6 55 60.0
SHI43834 Sapria himalayana HOM05D001249 ORTHO05D003440 9.7e-11 70.5 96 44.8
SHI49584 Sapria himalayana HOM05D001249 ORTHO05D003440 2.4e-09 65.9 88 43.2
SHI51574 Sapria himalayana HOM05D001249 ORTHO05D003440 5.3e-09 64.7 55 56.4
SHI55027 Sapria himalayana HOM05D001249 ORTHO05D003440 5.3e-09 64.7 56 57.1
SHI01452 Sapria himalayana HOM05D001249 ORTHO05D003440 1.2e-08 63.5 74 45.9
SHI47228 Sapria himalayana HOM05D001249 ORTHO05D003440 5.9e-08 61.2 80 46.2
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 1.0e-07 60.5 47 61.7
MELO3C020416.2 Cucumis melo HOM05D001249 ORTHO05D003440 1.3e-07 60.1 47 59.6
CsaV3_2G011930 Cucumis sativus L. HOM05D001249 ORTHO05D003440 1.7e-07 59.7 47 59.6
Cpa.g.sc9.242 Carica papaya HOM05D001249 ORTHO05D003440 2.9e-07 58.9 47 59.6
ClCG06G010080 Citrullus lanatus HOM05D001249 ORTHO05D003440 2.9e-07 58.9 47 59.6
Dinv24741 Davidia involucrata HOM05D001249 ORTHO05D003440 2.9e-07 58.9 47 59.6
Zm00001eb064120 Zea mays HOM05D001249 ORTHO05D003440 2.9e-07 58.9 47 57.4
CAN.G68.1 Capsicum annuum HOM05D001249 ORTHO05D003440 3.8e-07 58.5 47 59.6
Ciclev10020871m.g Citrus clementina HOM05D001249 ORTHO05D003440 5.0e-07 58.2 47 59.6
SGA_v2.0_scaffold37G14908 Striga asiatica HOM05D001249 ORTHO05D003440 5.0e-07 58.2 47 57.4
MSTRG.8086 Avicennia marina HOM05D001249 ORTHO05D003440 6.5e-07 57.8 47 57.4
BcaB06g29354 Brassica carinata HOM05D001249 ORTHO05D003440 6.5e-07 57.8 47 57.4
Lju124C5T8 Lonicera japonica HOM05D001249 ORTHO05D003440 6.5e-07 57.8 47 57.4
Lju41A14T32 Lonicera japonica HOM05D001249 ORTHO05D003440 6.5e-07 57.8 47 57.4
Oeu014978.1 Olea europaea HOM05D001249 ORTHO05D003440 6.5e-07 57.8 47 57.4
SGA_v2.0_scaffold12G06226 Striga asiatica HOM05D001249 ORTHO05D003440 6.5e-07 57.8 47 57.4
THA.LOC104804361 Tarenaya hassleriana HOM05D001249 ORTHO05D003440 6.5e-07 57.8 47 59.6
CARHR139220 Cardamine hirsuta HOM05D001249 ORTHO05D003440 8.5e-07 57.4 47 57.4
Nitab4.5_0003681g0020 Nicotiana tabacum HOM05D001249 ORTHO05D003440 8.5e-07 57.4 47 57.4
Sed0022992 Sechium edule HOM05D001249 ORTHO05D003440 8.5e-07 57.4 47 57.4
Duzib093G0930 Durio zibethinus HOM05D001249 ORTHO05D003440 1.4e-06 56.6 47 57.4
MD02G1000600 Malus domestica HOM05D001249 ORTHO05D003440 1.4e-06 56.6 47 57.4
SHI51778 Sapria himalayana HOM05D001249 ORTHO05D003440 1.4e-06 56.6 51 52.9
Sed0007404 Sechium edule HOM05D001249 ORTHO05D003440 1.4e-06 56.6 47 57.4
PGSC0003DMG400013715 Solanum tuberosum HOM05D001249 ORTHO05D003440 1.4e-06 56.6 47 57.4
CiPaw.02G125500 Carya illinoinensis HOM05D001249 ORTHO05D003440 1.9e-06 56.2 47 57.4
Nitab4.5_0000348g0040 Nicotiana tabacum HOM05D001249 ORTHO05D003440 1.9e-06 56.2 47 57.4
Peaxi162Scf01205g00175 Petunia axillaris HOM05D001249 ORTHO05D003440 1.9e-06 56.2 47 55.3
Atru.chr3.1961 Acer truncatum HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 57.4
arahy.Tifrunner.gnm1.ann1.4U54KW Arachis hypogaea HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 53.2
arahy.Tifrunner.gnm1.ann1.GD18YF Arachis hypogaea HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 53.2
CANSAT56G2692 Cannabis sativa HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 57.4
COL.COLO4_32523 Corchorus olitorius HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 59.6
Glyma.14G037300 Glycine max HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 57.4
Phvul.008G203600 Phaseolus vulgaris HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 57.4
SHI03553 Sapria himalayana HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 55.3
THA.LOC104802350 Tarenaya hassleriana HOM05D001249 ORTHO05D003440 2.5e-06 55.8 47 57.4
AL4G42930 Arabidopsis lyrata HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
BcaB06g29513 Brassica carinata HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
A04p33180 Brassica napus HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
BolC4t28588H Brassica oleracea HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
BraA04t18777Z Brassica rapa HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
Carub.0004s2661 Capsella rubella HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
Ca_06180_v3 Cicer arietinum L. HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
Cc03_g16190 Coffea canephora HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
Glyma.02G277300 Glycine max HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
Gohir.A01G231800 Gossypium hirsutum HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 55.3
Gohir.D01G221900 Gossypium hirsutum HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 55.3
Gorai.002G268600 Gossypium raimondii HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 55.3
Prupe.7G271000 Prunus persica HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 55.3
SHI53941 Sapria himalayana HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 55.3
Thecc.05G000700 Theobroma cacao HOM05D001249 ORTHO05D003440 3.2e-06 55.5 47 57.4
Aa31LG1G25730 Aethionema arabicum HOM05D001249 ORTHO05D003440 4.2e-06 55.1 47 55.3
ATR0099G032 Amborella trichopoda HOM05D001249 ORTHO05D021216 4.2e-06 55.1 29 82.8
LjContig00564g0000582 Lotus japonicus HOM05D001249 ORTHO05D003440 4.2e-06 55.1 47 57.4
PGR142G4250 Punica granatum HOM05D001249 ORTHO05D003440 4.2e-06 55.1 47 55.3
VMungo0647G1653 Vigna mungo HOM05D001249 ORTHO05D003440 4.2e-06 55.1 47 57.4
AT2G44060 Arabidopsis thaliana HOM05D001249 ORTHO05D003440 5.5e-06 54.7 47 55.3
Migut.N03015 Erythranthe guttata HOM05D001249 ORTHO05D003440 5.5e-06 54.7 47 55.3
Lalb_Chr10g0106081 Lupinus albus HOM05D001249 ORTHO05D003440 5.5e-06 54.7 47 55.3
Gohir.A07G233300 Gossypium hirsutum HOM05D001249 ORTHO05D003440 7.2e-06 54.3 47 53.2
Peaxi162Scf00057g01912 Petunia axillaris HOM05D001249 ORTHO05D003440 7.2e-06 54.3 47 55.3
Peaxi162Scf63976g00001 Petunia axillaris HOM05D001249 ORTHO05D003440 7.2e-06 54.3 47 55.3
Aqoxy6G00001 Aquilegia oxysepala HOM05D001249 ORTHO05D003440 9.4e-06 53.9 43 55.8
FvH4_1g00090 Fragaria vesca HOM05D001249 ORTHO05D003440 9.4e-06 53.9 47 55.3
FAN26G0381 Fragaria x ananassa HOM05D001249 ORTHO05D003440 9.4e-06 53.9 47 55.3
FAN28G2707 Fragaria x ananassa HOM05D001249 ORTHO05D003440 9.4e-06 53.9 47 55.3
Lju470C1T4 Lonicera japonica HOM05D001249 ORTHO05D003440 9.4e-06 53.9 47 57.4
PSO170G3486 Papaver somniferum HOM05D001249 ORTHO05D003440 9.4e-06 53.9 43 55.8
RcHm_v2.0_Chr2g0084381 Rosa chinensis HOM05D001249 ORTHO05D003440 9.4e-06 53.9 47 55.3
SHI48973 Sapria himalayana HOM05D001249 ORTHO05D003440 9.4e-06 53.9 98 33.7
SMO367G0480 Selaginella moellendorffii HOM05D001249 ORTHO05D003440 9.4e-06 53.9 47 55.3
TAR362G1111 Trochodendron aralioides HOM05D001249 ORTHO05D003440 9.4e-06 53.9 43 58.1


User provided reference genes

Program Settings