Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33403 Sapria himalayana HOM05D004478 ORTHO05D037525 7.3e-161 570.5 281 100.0
SHI25190 Sapria himalayana HOM05D004478 ORTHO05D037525 2.9e-61 239.6 259 53.3
SHI13530 Sapria himalayana HOM05D004478 ORTHO05D007440 4.4e-41 172.6 116 78.4
SHI43043 Sapria himalayana HOM05D000957 ORTHO05D000754 3.0e-29 133.3 94 74.5
SHI07794 Sapria himalayana HOM05D004478 ORTHO05D037525 9.0e-26 121.7 106 64.2
SHI07793 Sapria himalayana HOM05D000957 ORTHO05D000754 1.0e-21 108.2 92 59.8
Sabra14G0047400 Salix brachista HOM05D004478 ORTHO05D007440 3.6e-19 99.8 121 47.9
Potri.014G067400 Populus trichocarpa HOM05D004478 ORTHO05D007440 1.8e-18 97.4 121 46.3
Phvul.007G022200 Phaseolus vulgaris HOM05D004478 ORTHO05D007440 2.6e-17 93.6 125 43.2
Oeu064473.1 Olea europaea HOM05D004478 ORTHO05D007440 4.5e-17 92.8 123 46.3
ATR0829G158 Amborella trichopoda HOM05D004478 ORTHO05D007440 5.8e-17 92.4 124 45.2
Ciclev10018542m.g Citrus clementina HOM05D004478 ORTHO05D007440 7.6e-17 92.0 117 48.7
COL.COLO4_12522 Corchorus olitorius HOM05D004478 ORTHO05D007440 9.9e-17 91.7 124 44.4
VMungo0720G2491 Vigna mungo HOM05D004478 ORTHO05D007440 9.9e-17 91.7 126 42.1
CsaV3_6G006310 Cucumis sativus L. HOM05D004478 ORTHO05D007440 1.3e-16 91.3 127 46.5
Duzib213G0292 Durio zibethinus HOM05D004478 ORTHO05D007440 1.3e-16 91.3 123 45.5
THA.LOC104827612 Tarenaya hassleriana HOM05D004478 ORTHO05D007440 1.3e-16 91.3 113 46.9
Manes.05G047400 Manihot esculenta HOM05D004478 ORTHO05D007440 1.7e-16 90.9 118 44.1
Solyc01g091080.3 Solanum lycopersicum HOM05D004478 ORTHO05D007440 1.7e-16 90.9 123 46.3
Sopen01g036830 Solanum pennellii HOM05D004478 ORTHO05D007440 1.7e-16 90.9 123 46.3
ClCG06G000530 Citrullus lanatus HOM05D004478 ORTHO05D007440 4.9e-16 89.4 125 47.2
Atru.chr5.277 Acer truncatum HOM05D004478 ORTHO05D007440 6.4e-16 89.0 123 43.9
Gohir.D05G336900 Gossypium hirsutum HOM05D004478 ORTHO05D007440 8.4e-16 88.6 123 43.1
Gorai.009G361000 Gossypium raimondii HOM05D004478 ORTHO05D007440 8.4e-16 88.6 123 43.9
Nitab4.5_0010730g0030 Nicotiana tabacum HOM05D004478 ORTHO05D007440 8.4e-16 88.6 123 43.9
Sp5g02510 Schrenkiella parvula HOM05D004478 ORTHO05D007440 8.4e-16 88.6 114 44.7
PGSC0003DMG400025966 Solanum tuberosum HOM05D004478 ORTHO05D007440 8.4e-16 88.6 123 45.5
Thecc.01G379300 Theobroma cacao HOM05D004478 ORTHO05D007440 8.4e-16 88.6 123 45.5
Lj5g0020792 Lotus japonicus HOM05D004478 ORTHO05D007440 1.1e-15 88.2 126 40.5
TWI14G0271 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 1.1e-15 88.2 122 44.3
TWI14G1129 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 1.1e-15 88.2 122 44.3
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea HOM05D004478 ORTHO05D007440 1.4e-15 87.8 126 39.7
Glyma.10G279100 Glycine max HOM05D004478 ORTHO05D007440 1.4e-15 87.8 126 41.3
Nitab4.5_0000457g0060 Nicotiana tabacum HOM05D004478 ORTHO05D007440 1.4e-15 87.8 123 43.9
GSVIVG01027657001 Vitis vinifera HOM05D004478 ORTHO05D007440 1.4e-15 87.8 113 45.1
MELO3C022488.2 Cucumis melo HOM05D004478 ORTHO05D007440 1.9e-15 87.4 125 47.2
Dinv43687 Davidia involucrata HOM05D004478 ORTHO05D007440 1.9e-15 87.4 123 43.9
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea HOM05D004478 ORTHO05D007440 2.4e-15 87.0 126 39.7
TPR.G2420 Trifolium pratense HOM05D004478 ORTHO05D007440 2.4e-15 87.0 126 41.3
MBI04_g11448_MAGBIO Magnolia biondii HOM05D004478 ORTHO05D007440 3.2e-15 86.7 123 41.5
PSO782G0861 Papaver somniferum HOM05D004478 ORTHO05D007440 3.2e-15 86.7 123 42.3
TWI59G0724 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 3.2e-15 86.7 122 43.4
Eucgr.E01450 Eucalyptus grandis HOM05D004478 ORTHO05D007440 5.4e-15 85.9 122 42.6
Hund27372 Selenicereus undatus HOM05D004478 ORTHO05D007440 5.4e-15 85.9 120 43.3
TWI14G0506 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 5.4e-15 85.9 122 43.4
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea HOM05D004478 ORTHO05D007440 7.1e-15 85.5 125 39.2
AUR62004186 Chenopodium quinoa HOM05D004478 ORTHO05D007440 7.1e-15 85.5 122 42.6
Medtr1g112130 Medicago truncatula HOM05D004478 ORTHO05D007440 7.1e-15 85.5 126 41.3
SalBow5G5434 Salvia bowleyana HOM05D004478 ORTHO05D007440 7.1e-15 85.5 118 43.2
vmacro13419 Vaccinium macrocarpon HOM05D004478 ORTHO05D007440 7.1e-15 85.5 123 42.3
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea HOM05D004478 ORTHO05D007440 1.2e-14 84.7 125 39.2
AUR62013659 Chenopodium quinoa HOM05D004478 ORTHO05D007440 1.2e-14 84.7 122 42.6
Os10g0508500 Oryza sativa ssp. japonica HOM05D004478 ORTHO05D007440 1.2e-14 84.7 122 41.8
Ca_25666_v3 Cicer arietinum L. HOM05D004478 ORTHO05D007440 1.6e-14 84.3 126 39.7
Gohir.A04G045800 Gossypium hirsutum HOM05D004478 ORTHO05D007440 1.6e-14 84.3 123 42.3
MD02G1313300 Malus domestica HOM05D004478 ORTHO05D007440 1.6e-14 84.3 121 43.8
Sed0027727 Sechium edule HOM05D004478 ORTHO05D007440 1.6e-14 84.3 125 43.2
unitig_32.g11469 Utricularia gibba HOM05D004478 ORTHO05D007440 1.6e-14 84.3 113 42.5
Ah.05g174780 Amaranthus hybridus HOM05D004478 ORTHO05D007440 2.1e-14 84.0 120 40.8
Cc02_g24170 Coffea canephora HOM05D004478 ORTHO05D007440 2.1e-14 84.0 123 43.9
FAN03G2702 Fragaria x ananassa HOM05D004478 ORTHO05D007440 2.1e-14 84.0 115 45.2
Glyma.20G110600 Glycine max HOM05D004478 ORTHO05D007440 2.1e-14 84.0 126 40.5
Nn6g34058 Nelumbo nucifera HOM05D004478 ORTHO05D007440 2.1e-14 84.0 122 42.6
HPP92_014468 Vanilla planifolia HOM05D004478 ORTHO05D007440 2.1e-14 84.0 124 42.7
Lalb_Chr02g0146291 Lupinus albus HOM05D004478 ORTHO05D007440 2.7e-14 83.6 129 38.8
SHI36665 Sapria himalayana HOM05D000854 ORTHO05D000778 2.7e-14 83.6 75 62.7
AL5G43050 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 3.5e-14 83.2 113 41.6
EL10Ac1g00864 Beta vulgaris HOM05D004478 ORTHO05D007440 3.5e-14 83.2 113 42.5
FAN06G3638 Fragaria x ananassa HOM05D004478 ORTHO05D007440 3.5e-14 83.2 115 45.2
CSS0018497 Camellia sinensis var. sinensis HOM05D004478 ORTHO05D007440 4.6e-14 82.8 123 41.5
FvH4_7g07690 Fragaria vesca HOM05D004478 ORTHO05D007440 4.6e-14 82.8 115 45.2
MD07G1008800 Malus domestica HOM05D004478 ORTHO05D007440 4.6e-14 82.8 121 43.8
Prupe.2G141700 Prunus persica HOM05D004478 ORTHO05D007440 4.6e-14 82.8 121 43.8
Rhsim07G0029300 Rhododendron simsii HOM05D004478 ORTHO05D007440 4.6e-14 82.8 123 42.3
RcHm_v2.0_Chr1g0342581 Rosa chinensis HOM05D004478 ORTHO05D007440 4.6e-14 82.8 121 43.8
Aqoxy7G00707 Aquilegia oxysepala HOM05D004478 ORTHO05D007440 6.0e-14 82.4 122 42.6
AT3G60740 Arabidopsis thaliana HOM05D004478 ORTHO05D007440 6.0e-14 82.4 113 39.8
MSTRG.4901 Avicennia marina HOM05D004478 ORTHO05D007440 6.0e-14 82.4 118 40.7
BolC4t24748H Brassica oleracea HOM05D004478 ORTHO05D007440 6.0e-14 82.4 113 43.4
CARHR171130 Cardamine hirsuta HOM05D004478 ORTHO05D007440 6.0e-14 82.4 113 42.5
Carub.0005s2747 Capsella rubella HOM05D004478 ORTHO05D007440 7.9e-14 82.0 113 42.5
Haze_02653 Corylus avellana HOM05D004478 ORTHO05D007440 7.9e-14 82.0 126 41.3
Peaxi162Scf00013g02923 Petunia axillaris HOM05D004478 ORTHO05D007440 7.9e-14 82.0 123 42.3
QL04p040018 Quercus lobata HOM05D004478 ORTHO05D007440 7.9e-14 82.0 124 41.9
Cfa011194 Carpinus fangiana HOM05D004478 ORTHO05D007440 1.0e-13 81.6 126 41.3
Actinidia12243 Actinidia chinensis HOM05D004478 ORTHO05D007440 1.3e-13 81.3 123 39.8
Migut.N01621 Erythranthe guttata HOM05D004478 ORTHO05D007440 1.3e-13 81.3 113 43.4
AL2G22100 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 1.8e-13 80.9 113 40.7
Sc02g0002670 Simmondsia chinensis HOM05D004478 ORTHO05D007440 1.8e-13 80.9 115 42.6
DCAR_015895 Daucus carota HOM05D004478 ORTHO05D007440 2.3e-13 80.5 119 39.5
Thhalv10005754m.g Eutrema salsugineum HOM05D004478 ORTHO05D007440 2.3e-13 80.5 113 41.6
Lj9C568G3 Lonicera japonica HOM05D004478 ORTHO05D007440 2.3e-13 80.5 114 43.0
SEGI_40120 Sequoiadendron giganteum HOM05D004478 ORTHO05D007440 2.3e-13 80.5 125 42.4
Aa31LG10G14990 Aethionema arabicum HOM05D004478 ORTHO05D007440 3.0e-13 80.1 113 41.6
A04p01470 Brassica napus HOM05D004478 ORTHO05D007440 3.0e-13 80.1 116 43.1
BraA04t15865Z Brassica rapa HOM05D004478 ORTHO05D007440 3.0e-13 80.1 116 43.1
Lsat_1_v5_gn_7_9321 Lactuca sativa HOM05D004478 ORTHO05D007440 3.0e-13 80.1 113 43.4
FAN10G0184 Fragaria x ananassa HOM05D004478 ORTHO05D007440 3.9e-13 79.7 114 44.7
BcaC02g10175 Brassica carinata HOM05D004478 ORTHO05D007440 5.1e-13 79.3 112 42.9
Nitab4.5_0000252g0220 Nicotiana tabacum HOM05D004478 ORTHO05D007440 1.1e-12 78.2 123 42.3
C04p31950 Brassica napus HOM05D004478 ORTHO05D007440 1.5e-12 77.8 112 42.0
Carub.0002s1114 Capsella rubella HOM05D004478 ORTHO05D007440 1.5e-12 77.8 113 40.7
Mapoly0039s0061 Marchantia polymorpha HOM05D004478 ORTHO05D007440 1.9e-12 77.4 111 38.7
Psat6g230960 Pisum sativum HOM05D004478 ORTHO05D007440 1.9e-12 77.4 125 38.4
PGR042G4004 Punica granatum HOM05D004478 ORTHO05D007440 1.9e-12 77.4 113 41.6
SGA_v2.0_scaffold43G16502 Striga asiatica HOM05D004478 ORTHO05D007440 1.9e-12 77.4 117 40.2
CiPaw.14G027200 Carya illinoinensis HOM05D004478 ORTHO05D007440 2.5e-12 77.0 123 40.7
Zm00001eb220640 Zea mays HOM05D004478 ORTHO05D007440 5.6e-12 75.9 122 41.8
Cpa.g.sc145.17 Carica papaya HOM05D004478 ORTHO05D007440 9.6e-12 75.1 116 37.9
Pp3c2_18070 Physcomitrium patens HOM05D004478 ORTHO05D007440 9.6e-12 75.1 135 34.8
HanXRQChr04g0122511 Helianthus annuus HOM05D004478 ORTHO05D007440 1.6e-11 74.3 113 42.5
ECA236G4615 Erigeron canadensis HOM05D004478 ORTHO05D007440 2.1e-11 73.9 113 40.7
SMO147G0207 Selaginella moellendorffii HOM05D004478 ORTHO05D007440 3.7e-11 73.2 113 37.2
AagrBONN_evm.TU.Sc2ySwM_344.164 Anthoceros agrestis HOM05D004478 ORTHO05D007440 4.0e-10 69.7 113 36.3
SHI29577 Sapria himalayana HOM05D025709 ORTHO05D368659 5.8e-09 65.9 54 66.7
TAR362G0193 Trochodendron aralioides HOM05D000957 ORTHO05D000754 1.4e-07 61.2 192 26.0
CBR_g24365 Chara braunii HOM05D004478 ORTHO05D007440 2.4e-07 60.5 118 33.1
Duzib213G0739 Durio zibethinus HOM05D004478 ORTHO05D007440 7.9e-06 55.5 75 44.0


User provided reference genes

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