Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33402 Sapria himalayana HOM05D000957 ORTHO05D000754 6.3e-25 116.7 61 100.0
SHI43043 Sapria himalayana HOM05D000957 ORTHO05D000754 5.5e-13 77.0 56 76.8
Hma1.2p1_0484F.1_g162860 Hydrangea macrophylla HOM05D000957 ORTHO05D000754 7.4e-10 66.6 55 63.6
SHI07793 Sapria himalayana HOM05D000957 ORTHO05D000754 7.4e-10 66.6 51 72.5
Haze_05114 Corylus avellana HOM05D000957 ORTHO05D000754 9.7e-10 66.2 52 65.4
GSVIVG01028199001 Vitis vinifera HOM05D000957 ORTHO05D000754 1.3e-09 65.9 52 67.3
Manes.01G232800 Manihot esculenta HOM05D000957 ORTHO05D000754 2.8e-09 64.7 52 65.4
CiPaw.07G122800 Carya illinoinensis HOM05D000957 ORTHO05D000754 3.7e-09 64.3 52 69.2
QL12p034289 Quercus lobata HOM05D000957 ORTHO05D000754 3.7e-09 64.3 52 65.4
Dinv33155 Davidia involucrata HOM05D000957 ORTHO05D000754 8.2e-09 63.2 52 63.5
Thecc.01G321900 Theobroma cacao HOM05D000957 ORTHO05D000754 8.2e-09 63.2 52 63.5
TWI14G0783 Tripterygium wilfordii HOM05D000957 ORTHO05D000754 8.2e-09 63.2 52 65.4
CiPaw.08G084700 Carya illinoinensis HOM05D000957 ORTHO05D000754 1.1e-08 62.8 52 65.4
Duzib138G0103 Durio zibethinus HOM05D000957 ORTHO05D000754 2.4e-08 61.6 52 61.5
Actinidia20969 Actinidia chinensis HOM05D000957 ORTHO05D000754 3.1e-08 61.2 52 63.5
Manes.05G011100 Manihot esculenta HOM05D000957 ORTHO05D000754 3.1e-08 61.2 52 61.5
CSS0011608 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 4.1e-08 60.8 52 61.5
CSS0013937 Camellia sinensis var. sinensis HOM05D000957 ORTHO05D000754 4.1e-08 60.8 52 61.5
Actinidia25869 Actinidia chinensis HOM05D000957 ORTHO05D000754 6.9e-08 60.1 52 63.5
Cpa.g.sc543.4 Carica papaya HOM05D000957 ORTHO05D000754 6.9e-08 60.1 56 57.1
Eucgr.K03572 Eucalyptus grandis HOM05D000957 ORTHO05D000754 6.9e-08 60.1 52 67.3
FvH4_1g26530 Fragaria vesca HOM05D000957 ORTHO05D000754 6.9e-08 60.1 52 59.6
Peaxi162Scf00058g02110 Petunia axillaris HOM05D000957 ORTHO05D000754 6.9e-08 60.1 52 65.4
Potri.002G190200 Populus trichocarpa HOM05D000957 ORTHO05D000754 6.9e-08 60.1 52 61.5
RcHm_v2.0_Chr3g0486611 Rosa chinensis HOM05D000957 ORTHO05D000754 6.9e-08 60.1 52 57.7
Gohir.A08G121000 Gossypium hirsutum HOM05D000957 ORTHO05D000754 1.2e-07 59.3 52 59.6
Gohir.D08G142300 Gossypium hirsutum HOM05D000957 ORTHO05D000754 1.2e-07 59.3 52 59.6
Gorai.004G146600 Gossypium raimondii HOM05D000957 ORTHO05D000754 1.2e-07 59.3 52 59.6
CANSAT25G2543 Cannabis sativa HOM05D000957 ORTHO05D000754 1.5e-07 58.9 52 61.5
Potri.014G115200 Populus trichocarpa HOM05D000957 ORTHO05D000754 1.5e-07 58.9 52 57.7
Prupe.3G004800 Prunus persica HOM05D000957 ORTHO05D000754 2.0e-07 58.5 52 59.6
THA.LOC104802132 Tarenaya hassleriana HOM05D000957 ORTHO05D000754 2.0e-07 58.5 52 59.6
COL.COLO4_23166 Corchorus olitorius HOM05D000957 ORTHO05D000754 3.4e-07 57.8 52 63.5
MD09G1288800 Malus domestica HOM05D000957 ORTHO05D000754 4.5e-07 57.4 52 61.5
Ciclev10021203m.g Citrus clementina HOM05D000957 ORTHO05D000754 5.9e-07 57.0 52 55.8
Gohir.A12G121700 Gossypium hirsutum HOM05D000957 ORTHO05D000754 5.9e-07 57.0 52 57.7
Gohir.D12G125300 Gossypium hirsutum HOM05D000957 ORTHO05D000754 5.9e-07 57.0 52 57.7
Gorai.008G136300 Gossypium raimondii HOM05D000957 ORTHO05D000754 5.9e-07 57.0 52 57.7
Rhsim01G0293000 Rhododendron simsii HOM05D000957 ORTHO05D000754 7.7e-07 56.6 52 57.7
TAR362G0193 Trochodendron aralioides HOM05D000957 ORTHO05D000754 7.7e-07 56.6 55 60.0
Hma1.2p1_0408F.1_g146420 Hydrangea macrophylla HOM05D000957 ORTHO05D000754 1.0e-06 56.2 52 57.7
MD17G1280700 Malus domestica HOM05D000957 ORTHO05D000754 1.0e-06 56.2 52 57.7
PGR044G0101 Punica granatum HOM05D000957 ORTHO05D000754 1.0e-06 56.2 56 60.7
Atru.chr5.913 Acer truncatum HOM05D000957 ORTHO05D000754 1.3e-06 55.8 52 57.7
EL10As5g23583 Beta vulgaris HOM05D000957 ORTHO05D000754 1.3e-06 55.8 52 57.7
Eucgr.H00893 Eucalyptus grandis HOM05D000957 ORTHO05D000754 1.7e-06 55.5 52 55.8
Sabra14G0085300 Salix brachista HOM05D000957 ORTHO05D000754 2.2e-06 55.1 54 53.7
Dinv12101 Davidia involucrata HOM05D000957 ORTHO05D000754 5.0e-06 53.9 52 55.8
Nn4g25421 Nelumbo nucifera HOM05D000957 ORTHO05D000754 6.5e-06 53.5 58 53.4
TPR.G3060 Trifolium pratense HOM05D000957 ORTHO05D000754 8.5e-06 53.1 52 59.6


User provided reference genes

Program Settings