Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 2.8e-108 395.2 190 100.0
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.8e-25 120.2 70 75.7
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 6.7e-25 118.2 84 65.5
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.1e-24 117.5 70 74.3
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.5e-24 117.1 72 77.8
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.5e-24 117.1 70 72.9
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.9e-24 116.7 71 71.8
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 2.5e-24 116.3 79 69.6
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.3e-24 115.9 72 76.4
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 4.3e-24 115.5 86 65.1
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 7.4e-24 114.8 76 64.5
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 7.4e-24 114.8 71 74.6
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 7.4e-24 114.8 70 70.0
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 9.7e-24 114.4 71 74.6
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 9.7e-24 114.4 71 73.2
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.3e-23 114.0 72 76.4
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 1.3e-23 114.0 70 71.4
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.6e-23 113.6 70 71.4
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 1.6e-23 113.6 71 73.2
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 2.8e-23 112.8 70 70.0
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 2.8e-23 112.8 70 70.0
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 4.8e-23 112.1 70 70.0
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 6.3e-23 111.7 71 67.6
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.3e-23 111.7 70 70.0
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 8.2e-23 111.3 71 69.0
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 8.2e-23 111.3 70 68.6
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.1e-22 110.9 71 70.4
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.1e-22 110.9 70 68.6
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.1e-22 110.9 70 68.6
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.1e-22 110.9 71 73.2
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.1e-22 110.9 71 69.0
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.4e-22 110.5 71 66.2
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 1.8e-22 110.2 70 68.6
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.4e-22 109.8 71 69.0
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 2.4e-22 109.8 71 70.4
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 3.1e-22 109.4 70 67.1
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.1e-22 109.4 70 67.1
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.1e-22 109.4 76 63.2
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.1e-22 109.4 70 67.1
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.1e-22 109.4 70 67.1
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 3.1e-22 109.4 72 70.8
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 3.1e-22 109.4 71 70.4
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 3.1e-22 109.4 70 67.1
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.1e-22 109.4 71 71.8
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 4.1e-22 109.0 76 63.2
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 4.1e-22 109.0 71 70.4
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 5.3e-22 108.6 71 69.0
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 5.3e-22 108.6 71 69.0
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 5.3e-22 108.6 76 61.8
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 6.9e-22 108.2 71 69.0
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 6.9e-22 108.2 71 69.0
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 6.9e-22 108.2 71 69.0
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 9.0e-22 107.8 71 69.0
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 9.0e-22 107.8 70 67.1
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.2e-21 107.5 70 65.7
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.5e-21 107.1 80 61.2
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.5e-21 107.1 77 63.6
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 1.5e-21 107.1 71 66.2
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 2.0e-21 106.7 71 67.6
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 2.0e-21 106.7 71 66.2
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 2.6e-21 106.3 77 64.9
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 3.4e-21 105.9 71 69.0
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 4.5e-21 105.5 72 70.8
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 5.9e-21 105.1 71 66.2
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 7.7e-21 104.8 77 62.3
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 7.7e-21 104.8 77 62.3
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 7.7e-21 104.8 71 69.0
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 7.7e-21 104.8 71 64.8
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 7.7e-21 104.8 71 64.8
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.0e-20 104.4 73 61.6
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.0e-20 104.4 77 62.3
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.2e-20 103.2 71 64.8
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 3.8e-20 102.4 71 66.2
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 8.5e-20 101.3 72 69.4
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 8.5e-20 101.3 71 63.4
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 8.5e-20 101.3 71 66.2
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 1.1e-19 100.9 71 63.4
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 1.4e-19 100.5 71 63.4
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.9e-19 100.1 71 64.8
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 3.2e-19 99.4 72 68.1
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 3.2e-19 99.4 72 63.9
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 4.2e-19 99.0 71 62.0
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 7.2e-19 98.2 71 62.0
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 9.4e-19 97.8 73 61.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.6e-18 97.1 71 62.0
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 6.7e-17 91.7 69 60.9
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.4e-14 83.2 73 49.3
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 2.4e-14 83.2 69 52.2
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 6.9e-14 81.6 73 49.3
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.2e-13 80.9 52 65.4
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 2.6e-13 79.7 37 89.2
SHI43450 Sapria himalayana HOM05D000003 ORTHO05D000004 2.7e-10 69.7 110 37.3
SHI25410 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-09 67.4 98 38.8
SHI51710 Sapria himalayana HOM05D000003 ORTHO05D000004 3.9e-09 65.9 98 36.7
SHI25412 Sapria himalayana HOM05D000003 ORTHO05D000004 6.7e-09 65.1 98 36.7
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 8.8e-09 64.7 78 48.7
SHI22511 Sapria himalayana HOM05D000003 ORTHO05D000004 1.5e-08 63.9 97 37.1
SHI10793 Sapria himalayana HOM05D000003 ORTHO05D000004 2.0e-08 63.5 36 66.7
SHI42562 Sapria himalayana HOM05D000003 ORTHO05D000004 2.6e-08 63.2 98 36.7
SHI35540 Sapria himalayana HOM05D000003 ORTHO05D000004 7.4e-08 61.6 108 38.0
SHI03038 Sapria himalayana HOM05D000003 ORTHO05D000004 9.7e-08 61.2 98 35.7
SHI55245 Sapria himalayana HOM05D000003 ORTHO05D000004 1.7e-07 60.5 108 38.0
SHI20791 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-07 60.1 108 37.0
SHI25530 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-07 60.1 98 36.7
SHI32037 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-07 60.1 98 36.7
SHI27425 Sapria himalayana HOM05D000003 ORTHO05D000004 2.8e-07 59.7 108 35.2
SHI26642 Sapria himalayana HOM05D000003 ORTHO05D000004 4.8e-07 58.9 97 35.1
SHI07039 Sapria himalayana HOM05D000392 ORTHO05D000610 8.2e-07 58.2 108 35.2
SHI50916 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-06 57.4 98 31.6
SHI15146 Sapria himalayana HOM05D000003 ORTHO05D000004 2.4e-06 56.6 118 33.9
SHI54007 Sapria himalayana HOM05D000003 ORTHO05D000004 3.1e-06 56.2 118 33.9
SHI23104 Sapria himalayana HOM05D000002 ORTHO05D000047 4.1e-06 55.8 33 69.7
SHI27921 Sapria himalayana HOM05D000003 ORTHO05D000004 4.1e-06 55.8 34 64.7
SHI35533 Sapria himalayana HOM05D000003 ORTHO05D000004 5.3e-06 55.5 98 31.6
SHI36807 Sapria himalayana HOM05D000003 ORTHO05D000004 5.3e-06 55.5 98 30.6
SHI38927 Sapria himalayana HOM05D000003 ORTHO05D000004 5.3e-06 55.5 98 30.6


User provided reference genes

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