Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33113 Sapria himalayana HOM05D000004 ORTHO05D000002 2.1e-64 248.8 121 100.0
SHI35607 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-42 175.3 174 56.3
SHI12101 Sapria himalayana HOM05D000004 ORTHO05D000002 8.6e-34 147.1 96 78.1
SHI43945 Sapria himalayana HOM05D000004 ORTHO05D000002 8.6e-34 147.1 106 70.8
SHI27517 Sapria himalayana HOM05D000004 ORTHO05D000002 8.3e-29 130.6 115 60.9
SHI07764 Sapria himalayana HOM05D000004 ORTHO05D000002 9.2e-28 127.1 103 65.0
SHI22221 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-23 113.6 96 59.4
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 2.0e-22 109.4 129 48.1
CsaV3_6G022400 Cucumis sativus L. HOM05D001503 ORTHO05D003820 8.6e-18 94.0 131 40.5
CsaV3_1G028570 Cucumis sativus L. HOM05D000004 ORTHO05D000002 3.3e-17 92.0 129 40.3
CsaV3_1G031080 Cucumis sativus L. HOM05D000691 ORTHO05D000378 3.3e-17 92.0 129 40.3
CsaV3_5G014110 Cucumis sativus L. HOM05D003698 ORTHO05D004320 3.3e-17 92.0 129 40.3
CsaV3_5G018680 Cucumis sativus L. HOM05D000052 ORTHO05D000046 3.3e-17 92.0 129 40.3
CsaV3_UNG167280 Cucumis sativus L. HOM05D013071 ORTHO05D016268 3.3e-17 92.0 129 40.3
EL10As7g23739 Beta vulgaris HOM05D000004 ORTHO05D000002 7.3e-17 90.9 129 42.6
CsaV3_5G023160 Cucumis sativus L. HOM05D001517 ORTHO05D001424 7.3e-17 90.9 144 36.8
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-16 89.7 129 40.3
EL10As7g23735 Beta vulgaris HOM05D000004 ORTHO05D000002 6.2e-16 87.8 118 42.4
EL10As7g23737 Beta vulgaris HOM05D000004 ORTHO05D000002 6.2e-16 87.8 118 42.4
SHI25082 Sapria himalayana HOM05D000004 ORTHO05D000002 8.1e-16 87.4 99 50.5
CiPaw.04G042200 Carya illinoinensis HOM05D000004 ORTHO05D000002 1.1e-15 87.0 129 37.2
SHI32158 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-15 84.7 62 64.5
CsaV3_4G010140 Cucumis sativus L. HOM05D000004 ORTHO05D000002 8.9e-15 84.0 129 37.2
Ah.13g069290 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.0e-14 82.8 129 38.8
Ah.15g100080 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.0e-14 82.8 129 39.5
A09p01570 Brassica napus HOM05D000004 ORTHO05D000002 2.0e-14 82.8 129 38.0
ClCG10G007950 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.4e-14 81.6 145 35.2
SHI31165 Sapria himalayana HOM05D000004 ORTHO05D000002 9.8e-14 80.5 62 59.7
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 1.7e-13 79.7 129 36.4
Sp7g09270 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.7e-13 78.6 117 39.3
SHI04757 Sapria himalayana HOM05D000004 ORTHO05D000002 4.9e-13 78.2 70 54.3
SpUn0451_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.1e-12 77.0 129 36.4
PGR142G0242 Punica granatum HOM05D000004 ORTHO05D000002 7.1e-12 74.3 127 40.9
SHI24698 Sapria himalayana HOM05D000004 ORTHO05D000002 7.1e-12 74.3 122 41.0
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 9.2e-12 73.9 129 34.1
CSS0009919 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-11 73.2 41 87.8
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-11 73.2 112 38.4
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-11 72.4 129 33.3
Manes.15G121750 Manihot esculenta HOM05D000004 ORTHO05D000002 3.5e-11 72.0 130 35.4
SHI14899 Sapria himalayana HOM05D000004 ORTHO05D000378 4.6e-11 71.6 53 64.2
Sp4g07840 Schrenkiella parvula HOM05D000399 ORTHO05D000002 4.6e-11 71.6 131 35.1
SHI23100 Sapria himalayana HOM05D000004 ORTHO05D000002 7.8e-11 70.9 64 59.4
SHI03396 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-10 70.5 118 42.4
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-10 70.5 129 32.6
CSS0007734 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-10 69.7 41 87.8
PGSC0003DMG400000388 Solanum tuberosum HOM05D000004 ORTHO05D000002 1.7e-10 69.7 118 35.6
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-10 68.9 129 32.6
Sopen12g011100 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-10 68.9 108 36.1
CSS0003422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.1e-10 68.2 41 82.9
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-10 68.2 108 36.1
Sopen12g008510 Solanum pennellii HOM05D000691 ORTHO05D000378 5.1e-10 68.2 129 31.8
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-10 67.8 129 32.6
Sopen02g006790 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-10 67.8 76 47.4
Sopen04g014740 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-10 67.8 72 47.2
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 8.6e-10 67.4 129 31.8
SHI31506 Sapria himalayana HOM05D000004 ORTHO05D021182 1.1e-09 67.0 37 81.1
CSS0004422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-09 66.6 112 35.7
Manes.10G083832 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-09 66.6 129 33.3
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 1.5e-09 66.6 129 31.8
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.5e-09 65.9 127 32.3
Sopen07g006780 Solanum pennellii HOM05D000014 ORTHO05D000002 2.5e-09 65.9 117 33.3
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 2.5e-09 65.9 129 31.8
Sopen04g016000 Solanum pennellii HOM05D000004 ORTHO05D000378 3.3e-09 65.5 108 35.2
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 3.3e-09 65.5 129 30.2
Sopen11g010940 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-09 64.7 110 38.2
SHI08324 Sapria himalayana HOM05D000004 ORTHO05D000002 9.5e-09 63.9 41 75.6
Sopen01g009130 Solanum pennellii HOM05D000691 ORTHO05D000378 9.5e-09 63.9 85 38.8
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-08 63.5 112 32.1
CsaV3_UNG167240 Cucumis sativus L. HOM05D011462 ORTHO05D014612 1.6e-08 63.2 109 34.9
Manes.03G108966 Manihot esculenta HOM05D000004 ORTHO05D000002 1.6e-08 63.2 130 32.3
SpUn0043_0020 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.6e-08 63.2 118 33.1
SpUn0045_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.6e-08 63.2 118 33.1
Sopen07g017210 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-08 63.2 108 35.2
Sp4g07670 Schrenkiella parvula HOM05D000691 ORTHO05D000378 2.1e-08 62.8 117 35.9
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 2.8e-08 62.4 129 31.0
Manes.10G081651 Manihot esculenta HOM05D000004 ORTHO05D000002 3.6e-08 62.0 130 31.5
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 3.6e-08 62.0 129 34.9
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-08 62.0 99 39.4
Sopen06g004710 Solanum pennellii HOM05D000004 ORTHO05D000378 6.2e-08 61.2 64 50.0
Sopen05g005120 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-07 60.1 99 38.4
Sopen10g015090 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-07 60.1 96 33.3
CsaV3_3G022360 Cucumis sativus L. HOM05D000004 ORTHO05D000002 1.8e-07 59.7 47 59.6
Sopen02g003780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-07 59.7 116 34.5
Sopen02g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 99 37.4
CSS0010412 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-07 59.3 80 42.5
SHI07587 Sapria himalayana HOM05D000004 ORTHO05D021182 2.3e-07 59.3 44 59.1
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-07 59.3 112 33.0
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-07 59.3 110 33.6
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-07 58.5 109 35.8
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-07 58.5 109 35.8
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-07 58.5 109 35.8
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-07 58.5 109 35.8
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-07 58.5 109 35.8
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 5.2e-07 58.2 109 35.8
RcHm_v2.0_Chr7g0200201 Rosa chinensis HOM05D000004 ORTHO05D000002 5.2e-07 58.2 133 30.8
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-07 58.2 99 38.4
Sopen02g009180 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-07 58.2 99 37.4
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-07 58.2 99 37.4
Sopen10g014200 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-07 58.2 109 36.7
Sp4g07530 Schrenkiella parvula HOM05D000691 ORTHO05D000378 8.9e-07 57.4 102 35.3
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 57.0 110 33.6
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 57.0 110 33.6
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 57.0 110 33.6
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-06 57.0 110 33.6
Sopen02g010300 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 57.0 99 37.4
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 57.0 94 38.3
Sopen08g009080 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 57.0 79 43.0
SHI34332 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-06 56.6 32 87.5
Sopen01g024900 Solanum pennellii HOM05D000691 ORTHO05D000378 1.5e-06 56.6 85 40.0
Sopen02g009450 Solanum pennellii HOM05D000691 ORTHO05D000378 1.5e-06 56.6 97 38.1
Sopen02g009460 Solanum pennellii HOM05D000691 ORTHO05D000378 1.5e-06 56.6 97 38.1
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 56.6 99 37.4
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 56.6 98 33.7
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-06 56.2 110 32.7
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 2.6e-06 55.8 118 30.5
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-06 55.8 99 37.4
Sopen07g006720 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-06 55.8 108 30.6
Sopen08g015760 Solanum pennellii HOM05D000004 ORTHO05D000378 2.6e-06 55.8 109 33.9
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 3.4e-06 55.5 129 29.5
Sopen01g016830 Solanum pennellii HOM05D000691 ORTHO05D000378 3.4e-06 55.5 97 36.1
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-06 55.5 90 37.8
Sopen10g017950 Solanum pennellii HOM05D000014 ORTHO05D000016 3.4e-06 55.5 114 32.5
Sopen12g015730 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-06 55.5 99 36.4
SHI21457 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-06 55.1 26 96.2
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.1 145 29.0
CAN.G500.93 Capsicum annuum HOM05D000004 ORTHO05D000002 5.8e-06 54.7 109 33.9
COL.COLO4_07941 Corchorus olitorius HOM05D011008 ORTHO05D015283 5.8e-06 54.7 97 35.1
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-06 54.7 141 29.1
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 5.8e-06 54.7 145 29.0
Manes.01G049915 Manihot esculenta HOM05D000004 ORTHO05D000002 7.6e-06 54.3 41 63.4
Sp4g06750 Schrenkiella parvula HOM05D000004 ORTHO05D000002 7.6e-06 54.3 40 60.0
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-06 54.3 145 29.0
Sopen03g009560 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-06 53.9 96 31.2
Sopen05g011350 Solanum pennellii HOM05D000004 ORTHO05D000378 9.9e-06 53.9 89 37.1
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-06 53.9 99 35.4
Sopen08g005590 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-06 53.9 141 29.1
Sopen08g011070 Solanum pennellii HOM05D000014 ORTHO05D000016 9.9e-06 53.9 110 32.7


User provided reference genes

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