Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32958 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-53 210.7 100 100.0
FvH4_1g23712 Fragaria vesca HOM05D000004 ORTHO05D000002 6.9e-13 77.4 74 52.7
FvH4_1g29809 Fragaria vesca HOM05D000004 ORTHO05D000002 7.6e-12 73.9 74 51.4
CSS0009919 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.2e-10 68.2 74 43.2
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.2e-10 68.2 74 43.2
SHI10874 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-09 66.6 73 46.6
CSS0000763 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-09 65.1 74 43.2
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-09 65.1 74 43.2
SHI04459 Sapria himalayana HOM05D000004 ORTHO05D000002 7.9e-09 63.9 66 47.0
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-08 63.5 74 44.6
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 62 46.8
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 62 45.2
Sopen11g012760 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 60 50.0
Sopen11g024700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-08 63.2 62 46.8
FvH4_4g19351 Fragaria vesca HOM05D000691 ORTHO05D000378 1.8e-08 62.8 74 43.2
Sopen02g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 62.8 62 45.2
Sopen02g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-08 62.8 62 46.8
Sopen05g005110 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 62.8 62 48.4
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-08 62.4 62 46.8
CSS0003422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-08 62.0 74 41.9
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-08 62.0 62 45.2
SHI02292 Sapria himalayana HOM05D000023 ORTHO05D000002 3.9e-08 61.6 163 28.8
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-08 61.6 62 45.2
SHI12100 Sapria himalayana HOM05D000004 ORTHO05D000002 5.1e-08 61.2 74 43.2
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 6.7e-08 60.8 60 45.0
Sp1g32920 Schrenkiella parvula HOM05D000004 ORTHO05D000002 8.7e-08 60.5 66 42.4
Rhsim10G0189700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-07 60.1 61 45.9
Sopen02g009990 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 59.7 62 43.5
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-07 59.3 73 41.1
SEGI_21685 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.9e-07 59.3 91 35.2
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-07 58.9 70 41.4
FvH4_6g15221 Fragaria vesca HOM05D000004 ORTHO05D000002 2.5e-07 58.9 60 43.3
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 2.5e-07 58.9 60 43.3
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-07 58.5 60 43.3
Sopen02g011330 Solanum pennellii HOM05D000004 ORTHO05D008835 3.3e-07 58.5 60 43.3
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-07 58.5 60 41.7
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 4.3e-07 58.2 62 43.5
SEGI_00542 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.3e-07 58.2 69 39.1
Sc17g0004620 Simmondsia chinensis HOM05D001091 ORTHO05D001020 4.3e-07 58.2 70 41.4
Sopen02g009970 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-07 58.2 62 41.9
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 5.7e-07 57.8 60 43.3
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 5.7e-07 57.8 60 43.3
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 5.7e-07 57.8 60 43.3
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 5.7e-07 57.8 60 43.3
CAN.G8386.1 Capsicum annuum HOM05D000004 ORTHO05D000002 5.7e-07 57.8 60 43.3
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 5.7e-07 57.8 60 43.3
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 5.7e-07 57.8 60 41.7
Rhsim02G0166800 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.7e-07 57.8 61 44.3
SHI00778 Sapria himalayana HOM05D000004 ORTHO05D000002 5.7e-07 57.8 45 60.0
SHI22220 Sapria himalayana HOM05D000004 ORTHO05D000002 5.7e-07 57.8 62 45.2
Sopen05g027790 Solanum pennellii HOM05D000004 ORTHO05D000378 5.7e-07 57.8 60 45.0
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 7.4e-07 57.4 60 43.3
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 1.3e-06 56.6 74 39.2
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 56.6 62 43.5
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-06 56.6 63 41.3
SHI27536 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 56.2 71 42.3
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 2.1e-06 55.8 66 39.4
SHI11956 Sapria himalayana HOM05D001034 ORTHO05D000955 2.1e-06 55.8 48 56.2
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 55.8 60 43.3
Sopen05g029610 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-06 55.8 73 39.7
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 2.1e-06 55.8 60 43.3
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 2.1e-06 55.8 60 43.3
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 2.8e-06 55.5 60 41.7
RcHm_v2.0_Chr2g0149861 Rosa chinensis HOM05D000004 ORTHO05D000002 2.8e-06 55.5 66 39.4
Sopen08g018170 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-06 55.5 73 41.1
Sopen12g011680 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-06 55.5 60 41.7
SEGI_15568 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.7e-06 55.1 85 35.3
Sopen02g006790 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.1 59 42.4
Sopen02g007870 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-06 55.1 60 40.0
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.1 62 40.3
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-06 55.1 62 41.9
CSS0006424 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.8e-06 54.7 61 42.6
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-06 54.7 62 41.9
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 54.3 62 40.3
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 54.3 62 40.3
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 54.3 60 40.0
Sopen08g005590 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 54.3 62 40.3
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 54.3 56 44.6
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 54.3 62 41.9
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 54.3 62 41.9
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-06 53.9 60 38.3
Sopen05g016250 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-06 53.9 62 40.3


User provided reference genes

Program Settings