Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32806 Sapria himalayana HOM05D015702 ORTHO05D000037 7.0e-101 370.5 178 100.0
SHI28748 Sapria himalayana HOM05D000034 ORTHO05D000037 3.0e-67 258.8 252 56.7
SHI00667 Sapria himalayana HOM05D000034 ORTHO05D000037 9.6e-66 253.8 257 55.3
SHI51617 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-55 220.3 258 52.3
SHI09063 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-39 167.2 158 60.1
SHI50822 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-33 147.1 127 61.4
SHI40455 Sapria himalayana HOM05D015702 ORTHO05D000037 2.9e-30 136.0 79 81.0
SHI34010 Sapria himalayana HOM05D000034 ORTHO05D000037 1.7e-22 110.2 109 57.8
SHI40454 Sapria himalayana HOM05D003171 ORTHO05D000921 3.8e-22 109.0 55 94.5
SHI20335 Sapria himalayana HOM05D000034 ORTHO05D000037 1.9e-21 106.7 94 57.4
Lj6g0006348 Lotus japonicus HOM05D000034 ORTHO05D000037 1.6e-20 103.6 192 35.4
SHI08299 Sapria himalayana HOM05D000034 ORTHO05D000037 2.1e-20 103.2 122 50.8
Oeu059140.1 Olea europaea HOM05D000034 ORTHO05D000037 1.8e-16 90.1 185 29.7
CANSAT25G1047 Cannabis sativa HOM05D000034 ORTHO05D000037 2.4e-16 89.7 192 29.7
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 2.4e-16 89.7 192 29.2
TWI36G1086 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.4e-16 89.7 200 31.5
CANSAT01G0970 Cannabis sativa HOM05D000034 ORTHO05D000037 3.1e-16 89.4 192 28.6
TWI34G1639 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.3e-16 88.6 200 31.0
Lj6g0021296 Lotus japonicus HOM05D000034 ORTHO05D000037 7.7e-15 84.7 229 30.1
Oeu052245.1 Olea europaea HOM05D000034 ORTHO05D000037 7.7e-15 84.7 187 28.3
SHI27353 Sapria himalayana HOM05D015702 ORTHO05D000037 2.9e-14 82.8 47 85.1
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.9e-14 82.8 192 29.2
Atru.chr10.353 Acer truncatum HOM05D000034 ORTHO05D000037 5.0e-14 82.0 207 29.5
SHI13851 Sapria himalayana HOM05D000034 ORTHO05D000037 5.0e-14 82.0 89 48.3
Oeu059220.1 Olea europaea HOM05D000034 ORTHO05D000037 8.5e-14 81.3 173 28.9
SHI14674 Sapria himalayana HOM05D000034 ORTHO05D000037 3.2e-13 79.3 105 42.9
Oeu058683.2 Olea europaea HOM05D000034 ORTHO05D000037 5.5e-13 78.6 164 30.5
SHI02491 Sapria himalayana HOM05D015702 ORTHO05D000037 5.5e-13 78.6 43 88.4
SHI06760 Sapria himalayana HOM05D015702 ORTHO05D026119 5.5e-13 78.6 79 53.2
Aqoxy2G01242 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.2e-13 78.2 218 29.4
RcHm_v2.0_Chr1g0354781 Rosa chinensis HOM05D000034 ORTHO05D000037 9.4e-13 77.8 208 28.4
SHI27183 Sapria himalayana HOM05D015702 ORTHO05D000037 2.7e-12 76.3 49 75.5
QL02p005994 Quercus lobata HOM05D000034 ORTHO05D000037 4.7e-12 75.5 203 28.6
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.1e-12 75.1 172 31.4
PSO455G0007 Papaver somniferum HOM05D000034 ORTHO05D000037 8.0e-12 74.7 195 27.2
PSO170G2012 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-11 73.9 195 28.2
PSO170G6048 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-11 73.9 195 27.2
QL12p009842 Quercus lobata HOM05D000034 ORTHO05D000037 1.4e-11 73.9 178 30.9
QL03p032583 Quercus lobata HOM05D000034 ORTHO05D000921 3.0e-11 72.8 186 31.7
QL04p024672 Quercus lobata HOM05D000034 ORTHO05D000921 3.0e-11 72.8 186 31.7
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.9e-11 72.4 180 28.9
Oeu010625.1 Olea europaea HOM05D000034 ORTHO05D000037 3.9e-11 72.4 111 36.0
Lj1g0006711 Lotus japonicus HOM05D000034 ORTHO05D000037 5.2e-11 72.0 166 31.9
arahy.Tifrunner.gnm1.ann1.0H3PVU Arachis hypogaea HOM05D000034 ORTHO05D000037 6.7e-11 71.6 214 27.6
PSO017G3336 Papaver somniferum HOM05D000034 ORTHO05D000037 8.8e-11 71.2 207 26.1
PSO339G0716 Papaver somniferum HOM05D000034 ORTHO05D000037 8.8e-11 71.2 195 26.2
PSO782G2923 Papaver somniferum HOM05D000034 ORTHO05D000037 8.8e-11 71.2 207 26.1
CANSAT78G0685 Cannabis sativa HOM05D000034 ORTHO05D000037 1.5e-10 70.5 136 34.6
PSO724G0660 Papaver somniferum HOM05D000034 ORTHO05D000037 1.5e-10 70.5 192 28.1
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-10 70.5 129 38.0
PGR042G3315 Punica granatum HOM05D000034 ORTHO05D000037 2.6e-10 69.7 170 32.4
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.3e-10 69.3 192 27.6
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-10 68.9 188 28.7
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-10 68.9 188 28.7
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-10 68.9 188 28.7
CSS0004838 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.7e-10 68.6 188 28.7
Oeu007801.1 Olea europaea HOM05D000034 ORTHO05D000037 5.7e-10 68.6 181 28.7
PGR119G1175 Punica granatum HOM05D000034 ORTHO05D000037 7.4e-10 68.2 172 32.0
Lj3g0012180 Lotus japonicus HOM05D000034 ORTHO05D000037 1.3e-09 67.4 93 43.0
Oeu052246.1 Olea europaea HOM05D000034 ORTHO05D000037 1.3e-09 67.4 181 27.1
SHI17538 Sapria himalayana HOM05D015702 ORTHO05D006034 2.2e-09 66.6 44 75.0
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.8e-09 66.2 188 28.2
FvH4_4g20922 Fragaria vesca HOM05D000034 ORTHO05D000037 2.8e-09 66.2 203 26.1
FvH4_5g23912 Fragaria vesca HOM05D000034 ORTHO05D000037 2.8e-09 66.2 203 26.1
TWI75G0888 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-08 64.3 188 28.7
ECA246G0245 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.4e-08 63.9 114 36.8
PGR119G2337 Punica granatum HOM05D000034 ORTHO05D000037 1.4e-08 63.9 156 32.1
SHI34009 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-08 63.9 32 84.4
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.8e-08 63.5 206 27.7
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.8e-08 63.5 190 29.5
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.8e-08 63.5 193 25.9
Atru.chr5.2512 Acer truncatum HOM05D000034 ORTHO05D000037 3.1e-08 62.8 53 52.8
CANSAT54G0349 Cannabis sativa HOM05D000034 ORTHO05D000037 3.1e-08 62.8 106 32.1
CANSAT64G1448 Cannabis sativa HOM05D000034 ORTHO05D000037 3.1e-08 62.8 46 60.9
Oeu047409.1 Olea europaea HOM05D000034 ORTHO05D000037 4.1e-08 62.4 39 66.7
CANSAT01G1210 Cannabis sativa HOM05D000034 ORTHO05D000037 5.3e-08 62.0 130 32.3
Lj1g0002194 Lotus japonicus HOM05D000034 ORTHO05D000037 7.0e-08 61.6 100 39.0
TWI38G1809 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.0e-08 61.6 206 27.2
CANSAT25G0317 Cannabis sativa HOM05D000034 ORTHO05D000037 9.1e-08 61.2 204 25.5
Hma1.2p1_0729F.1_g209640 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.1e-08 61.2 114 32.5
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 9.1e-08 61.2 138 33.3
SHI20082 Sapria himalayana HOM05D004995 ORTHO05D006034 9.1e-08 61.2 41 73.2
CANSAT25G1749 Cannabis sativa HOM05D000034 ORTHO05D000037 1.2e-07 60.8 204 26.0
Prupe.6G167200 Prunus persica HOM05D000034 ORTHO05D000037 1.2e-07 60.8 123 32.5
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 1.6e-07 60.5 202 25.7
CSS0038692 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-07 60.5 104 32.7
CANSAT01G2546 Cannabis sativa HOM05D000034 ORTHO05D000037 1.6e-07 60.5 121 34.7
CANSAT25G1613 Cannabis sativa HOM05D000034 ORTHO05D000037 1.6e-07 60.5 121 34.7
SHI16541 Sapria himalayana HOM05D015702 ORTHO05D006034 2.0e-07 60.1 34 85.3
QL08p024725 Quercus lobata HOM05D000034 ORTHO05D000037 2.6e-07 59.7 71 45.1
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 3.5e-07 59.3 212 25.9
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 4.5e-07 58.9 212 25.5
Lj1g0016720 Lotus japonicus HOM05D000034 ORTHO05D000037 4.5e-07 58.9 95 36.8
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 4.5e-07 58.9 39 61.5
PSO700G0240 Papaver somniferum HOM05D000034 ORTHO05D000037 4.5e-07 58.9 39 61.5
PSO832G2050 Papaver somniferum HOM05D000034 ORTHO05D000037 4.5e-07 58.9 39 61.5
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 5.9e-07 58.5 47 55.3
Cpa.g.sc140.7 Carica papaya HOM05D000034 ORTHO05D000037 5.9e-07 58.5 55 49.1
TWI38G0764 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.9e-07 58.5 37 70.3
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.9e-07 58.5 30 80.0
TWI53G0208 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.9e-07 58.5 37 70.3
TWI53G0605 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.9e-07 58.5 37 70.3
TWI60G0087 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.9e-07 58.5 37 70.3
TWI75G1861 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.9e-07 58.5 77 44.2
TWI23G0349 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.7e-07 58.2 37 67.6
TWI79G1493 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.7e-07 58.2 197 25.4
arahy.Tifrunner.gnm1.ann1.TPRQ23 Arachis hypogaea HOM05D000034 ORTHO05D014074 1.0e-06 57.8 61 44.3
CSS0032587 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-06 57.8 184 26.6
CANSAT56G4166 Cannabis sativa HOM05D000034 ORTHO05D000037 1.0e-06 57.8 204 25.5
CANSAT78G0143 Cannabis sativa HOM05D000034 ORTHO05D000037 1.0e-06 57.8 204 25.5
FvH4_6g30381 Fragaria vesca HOM05D000034 ORTHO05D000037 1.0e-06 57.8 210 25.2
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 1.0e-06 57.8 39 59.0
TWI23G0160 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.8 37 67.6
TWI34G0916 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.8 37 67.6
TWI34G1702 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.8 37 67.6
TWI38G0294 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.8 37 67.6
TWI38G2340 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.8 37 67.6
TWI75G1126 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.8 37 67.6
TWI75G1289 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.8 30 80.0
Oeu013201.1 Olea europaea HOM05D000034 ORTHO05D000037 1.3e-06 57.4 146 27.4
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 1.3e-06 57.4 37 64.9
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 1.3e-06 57.4 37 64.9
TWI74G1293 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.3e-06 57.4 37 64.9
Atru.chr7.804 Acer truncatum HOM05D000034 ORTHO05D000037 1.7e-06 57.0 56 46.4
arahy.Tifrunner.gnm1.ann1.A10IKK Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.0 49 51.0
PSO541G4587 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-06 57.0 39 59.0
ECA240G4515 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.2e-06 56.6 114 30.7
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.2e-06 56.6 40 62.5
PGR042G2742 Punica granatum HOM05D000034 ORTHO05D000037 2.2e-06 56.6 205 27.8
TWI39G0077 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.2e-06 56.6 89 36.0
CSS0014685 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-06 56.2 225 24.0
CSS0047854 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-06 56.2 104 31.7
Lj3g0010919 Lotus japonicus HOM05D000034 ORTHO05D000037 2.9e-06 56.2 37 64.9
Prupe.1G189200 Prunus persica HOM05D000034 ORTHO05D000037 2.9e-06 56.2 95 35.8
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.9e-06 56.2 188 25.5
TWI12G0430 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.9e-06 56.2 37 64.9
Aqoxy6G02146 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.8e-06 55.8 37 62.2
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 3.8e-06 55.8 139 29.5
Hma1.2p1_0344F.1_g131060 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.8e-06 55.8 194 25.8
PSO017G6287 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-06 55.8 29 72.4
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 3.8e-06 55.8 39 59.0
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.8e-06 55.8 39 59.0
TWI34G0695 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.8e-06 55.8 37 64.9
TWI36G0210 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.8e-06 55.8 39 61.5
TWI56G1116 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.8e-06 55.8 39 61.5
TWI73G0374 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.8e-06 55.8 37 62.2
TWI81G0533 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.8e-06 55.8 39 61.5
CSS0041691 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.0e-06 55.5 39 59.0
Lj4C317T2 Lonicera japonica HOM05D000034 ORTHO05D001698 5.0e-06 55.5 124 27.4
Lj3g0004214 Lotus japonicus HOM05D000034 ORTHO05D000037 5.0e-06 55.5 37 62.2
PSO732G0102 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-06 55.5 39 56.4
PGR142G0569 Punica granatum HOM05D000034 ORTHO05D000037 5.0e-06 55.5 204 27.0
TWI09G1151 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.0e-06 55.5 41 58.5
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 6.5e-06 55.1 56 46.4
arahy.Tifrunner.gnm1.ann1.PZ3VRY Arachis hypogaea HOM05D000599 ORTHO05D000554 6.5e-06 55.1 50 48.0
HanXRQChr05g0143481 Helianthus annuus HOM05D000034 ORTHO05D000037 6.5e-06 55.1 52 50.0
HanXRQChr10g0313541 Helianthus annuus HOM05D000034 ORTHO05D000037 6.5e-06 55.1 52 50.0
Rhsim05G0157700 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.5e-06 55.1 35 62.9
Rhsim06G0023900 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.5e-06 55.1 37 62.2
Rhsim06G0093600 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.5e-06 55.1 35 62.9
Rhsim10G0146800 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.5e-06 55.1 35 62.9
TWI38G1321 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 6.5e-06 55.1 30 76.7
Aqoxy4G01233 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.5e-06 54.7 37 59.5
arahy.Tifrunner.gnm1.ann1.Z066NA Arachis hypogaea HOM05D000034 ORTHO05D000037 8.5e-06 54.7 54 48.1
AUR62009279 Chenopodium quinoa HOM05D000034 ORTHO05D000037 8.5e-06 54.7 48 56.2
Cc11_g05870 Coffea canephora HOM05D000034 ORTHO05D000037 8.5e-06 54.7 29 72.4
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 8.5e-06 54.7 224 25.9
Nn4g25053 Nelumbo nucifera HOM05D000034 ORTHO05D000037 8.5e-06 54.7 30 76.7
RcHm_v2.0_Chr2g0103971 Rosa chinensis HOM05D000034 ORTHO05D000037 8.5e-06 54.7 203 24.1


User provided reference genes

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