Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 8.6e-40 166.4 76 100.0
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 1.2e-14 82.8 71 56.3
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 2.1e-14 82.0 67 58.2
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 6.8e-13 77.0 49 59.2
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 8.9e-13 76.6 67 52.2
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 8.9e-13 76.6 56 60.7
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 2.0e-12 75.5 67 50.7
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 2.6e-12 75.1 67 49.3
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 3.4e-12 74.7 67 50.7
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 4.4e-12 74.3 72 52.8
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 4.4e-12 74.3 72 52.8
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 4.4e-12 74.3 72 52.8
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 4.4e-12 74.3 57 54.4
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 4.4e-12 74.3 72 52.8
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 4.4e-12 74.3 66 50.0
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 5.8e-12 73.9 72 52.8
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 5.8e-12 73.9 57 54.4
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 5.8e-12 73.9 57 54.4
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 7.6e-12 73.6 72 52.8
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 9.9e-12 73.2 63 50.8
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 9.9e-12 73.2 67 50.7
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 9.9e-12 73.2 64 48.4
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 9.9e-12 73.2 55 56.4
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 1.3e-11 72.8 67 49.3
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 1.3e-11 72.8 67 50.7
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 1.3e-11 72.8 67 49.3
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 1.3e-11 72.8 67 49.3
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 1.3e-11 72.8 67 49.3
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 1.3e-11 72.8 56 57.1
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.3e-11 72.8 57 54.4
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 1.3e-11 72.8 57 52.6
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 1.3e-11 72.8 67 47.8
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 1.3e-11 72.8 55 56.4
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 1.7e-11 72.4 67 47.8
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 2.2e-11 72.0 67 49.3
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 2.2e-11 72.0 55 54.5
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.2e-11 72.0 56 57.1
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.2e-11 72.0 56 57.1
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 2.9e-11 71.6 67 49.3
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 2.9e-11 71.6 60 50.0
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 2.9e-11 71.6 60 50.0
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 2.9e-11 71.6 67 46.3
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 3.8e-11 71.2 48 60.4
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 3.8e-11 71.2 67 47.8
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 3.8e-11 71.2 63 49.2
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 8.4e-11 70.1 67 46.3
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 8.4e-11 70.1 67 46.3
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 8.4e-11 70.1 49 57.1
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 1.1e-10 69.7 60 50.0
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 1.1e-10 69.7 69 50.7
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 1.1e-10 69.7 69 52.2
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 1.1e-10 69.7 71 46.5
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 1.4e-10 69.3 71 46.5
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 1.9e-10 68.9 48 58.3
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 1.9e-10 68.9 48 58.3
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 1.9e-10 68.9 67 44.8
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 1.9e-10 68.9 67 50.7
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 1.9e-10 68.9 59 50.8
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 1.9e-10 68.9 59 50.8
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 1.9e-10 68.9 68 50.0
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.9e-10 68.9 55 52.7
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 2.4e-10 68.6 59 52.5
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 2.4e-10 68.6 67 49.3
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 2.4e-10 68.6 59 52.5
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 3.2e-10 68.2 48 58.3
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 3.2e-10 68.2 48 58.3
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 3.2e-10 68.2 67 50.7
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 3.2e-10 68.2 71 43.7
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 4.1e-10 67.8 67 46.3
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 4.1e-10 67.8 67 46.3
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 4.1e-10 67.8 60 50.0
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 4.1e-10 67.8 59 50.8
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 5.4e-10 67.4 60 48.3
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 5.4e-10 67.4 59 49.2
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 5.4e-10 67.4 67 50.7
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 7.1e-10 67.0 60 50.0
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 7.1e-10 67.0 61 49.2
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 7.1e-10 67.0 67 44.8
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 9.2e-10 66.6 45 60.0
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 9.2e-10 66.6 67 43.3
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 1.2e-09 66.2 67 44.8
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.2e-09 66.2 50 54.0
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 1.2e-09 66.2 59 50.8
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 1.6e-09 65.9 71 42.3
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 2.1e-09 65.5 59 49.2
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 2.1e-09 65.5 59 49.2
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.7e-09 65.1 60 45.0
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 4.6e-09 64.3 45 57.8
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 1.0e-08 63.2 46 60.9
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 1.0e-08 63.2 46 60.9
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 1.3e-08 62.8 48 50.0
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 1.7e-08 62.4 56 53.6
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.3e-08 62.0 65 41.5
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.3e-08 62.0 65 41.5
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 3.0e-08 61.6 42 59.5
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 3.9e-08 61.2 64 39.1
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 3.9e-08 61.2 48 47.9
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 2.5e-07 58.5 43 58.1
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 9.6e-07 56.6 42 54.8
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 1.6e-06 55.8 42 52.4
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.8e-06 55.1 42 52.4
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 6.2e-06 53.9 48 47.9
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 6.2e-06 53.9 46 50.0


User provided reference genes

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