Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32499 Sapria himalayana HOM05D000141 ORTHO05D004489 1.8e-93 345.9 170 100.0
CiPaw.08G183100 Carya illinoinensis HOM05D000141 ORTHO05D004489 9.5e-63 243.8 165 72.7
Cpa.g.sc17.14 Carica papaya HOM05D000141 ORTHO05D004489 1.6e-62 243.0 166 70.5
PGR119G2404 Punica granatum HOM05D000141 ORTHO05D004489 1.6e-62 243.0 165 71.5
arahy.Tifrunner.gnm1.ann1.C6YA57 Arachis hypogaea HOM05D000141 ORTHO05D004489 6.1e-62 241.1 166 70.5
Atru.chr3.3 Acer truncatum HOM05D000141 ORTHO05D004489 8.0e-62 240.7 164 71.3
Haze_03652 Corylus avellana HOM05D000141 ORTHO05D004489 8.0e-62 240.7 168 68.5
Manes.01G158800 Manihot esculenta HOM05D000141 ORTHO05D004489 8.0e-62 240.7 161 73.9
Thecc.01G000500 Theobroma cacao HOM05D000141 ORTHO05D004489 1.0e-61 240.4 166 71.1
arahy.Tifrunner.gnm1.ann1.SMPN38 Arachis hypogaea HOM05D000141 ORTHO05D004489 1.4e-61 240.0 166 70.5
Gohir.A02G179100 Gossypium hirsutum HOM05D000141 ORTHO05D004489 1.4e-61 240.0 166 69.9
Gohir.D03G000600 Gossypium hirsutum HOM05D000141 ORTHO05D004489 1.4e-61 240.0 166 69.9
Gorai.003G001000 Gossypium raimondii HOM05D000141 ORTHO05D004489 1.4e-61 240.0 166 69.9
Potri.011G146700 Populus trichocarpa HOM05D000141 ORTHO05D004489 1.4e-61 240.0 166 69.9
Lalb_Chr16g0391741 Lupinus albus HOM05D000141 ORTHO05D004489 2.3e-61 239.2 166 69.3
Prupe.7G188900 Prunus persica HOM05D000141 ORTHO05D004489 3.0e-61 238.8 166 70.5
Dinv19108 Davidia involucrata HOM05D000141 ORTHO05D004489 5.2e-61 238.0 166 70.5
Glyma.16G111200 Glycine max HOM05D000141 ORTHO05D004489 5.2e-61 238.0 169 69.8
MD02G1106300 Malus domestica HOM05D000141 ORTHO05D004489 5.2e-61 238.0 166 70.5
QL06p053568 Quercus lobata HOM05D000141 ORTHO05D004489 8.8e-61 237.3 160 72.5
Duzib147G0825 Durio zibethinus HOM05D000141 ORTHO05D004489 1.2e-60 236.9 166 69.9
Glyma.09G194900 Glycine max HOM05D000141 ORTHO05D004489 1.2e-60 236.9 168 70.2
Aa31LG1G14480 Aethionema arabicum HOM05D000522 ORTHO05D004489 1.5e-60 236.5 166 69.9
Ciclev10024719m.g Citrus clementina HOM05D000141 ORTHO05D004489 1.5e-60 236.5 166 68.7
COL.COLO4_22572 Corchorus olitorius HOM05D000141 ORTHO05D004489 1.5e-60 236.5 166 69.9
A09p10250 Brassica napus HOM05D000141 ORTHO05D004489 2.0e-60 236.1 166 71.7
CARHR053030 Cardamine hirsuta HOM05D000141 ORTHO05D004489 2.0e-60 236.1 166 70.5
Lj2g0025271 Lotus japonicus HOM05D000141 ORTHO05D004489 2.0e-60 236.1 166 68.7
RcHm_v2.0_Chr2g0096601 Rosa chinensis HOM05D000141 ORTHO05D004489 2.0e-60 236.1 166 69.9
GSVIVG01026414001 Vitis vinifera HOM05D000141 ORTHO05D004489 2.0e-60 236.1 160 72.5
AL8G45710 Arabidopsis lyrata HOM05D000141 ORTHO05D004489 2.6e-60 235.7 166 69.9
MD15G1226100 Malus domestica HOM05D000141 ORTHO05D004489 2.6e-60 235.7 166 69.9
Carub.0008s2860 Capsella rubella HOM05D000141 ORTHO05D004489 3.4e-60 235.3 166 69.9
Os04g0666900 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004489 3.4e-60 235.3 167 67.7
Sabra11G0131600 Salix brachista HOM05D000141 ORTHO05D004489 3.4e-60 235.3 166 69.3
Sp2g30770 Schrenkiella parvula HOM05D000141 ORTHO05D004489 3.4e-60 235.3 166 70.5
TWI31G1431 Tripterygium wilfordii HOM05D000141 ORTHO05D004489 3.4e-60 235.3 166 68.1
Ca_22442_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 4.4e-60 235.0 168 69.0
Ca_22449_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 4.4e-60 235.0 168 69.0
Thhalv10003527m.g Eutrema salsugineum HOM05D000141 ORTHO05D004489 4.4e-60 235.0 166 69.9
BcaB04g20133 Brassica carinata HOM05D000141 ORTHO05D004489 5.7e-60 234.6 166 70.5
BraA09t36670Z Brassica rapa HOM05D000141 ORTHO05D004489 5.7e-60 234.6 166 71.1
Nn6g31557 Nelumbo nucifera HOM05D000141 ORTHO05D004489 5.7e-60 234.6 166 69.3
AT5G65930 Arabidopsis thaliana HOM05D000141 ORTHO05D004489 7.5e-60 234.2 166 69.3
CSS0021249 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 7.5e-60 234.2 160 70.6
Eucgr.I02176 Eucalyptus grandis HOM05D000141 ORTHO05D004489 9.8e-60 233.8 165 69.1
arahy.Tifrunner.gnm1.ann1.77JLPP Arachis hypogaea HOM05D000141 ORTHO05D004489 1.3e-59 233.4 166 68.7
arahy.Tifrunner.gnm1.ann1.L4A5BH Arachis hypogaea HOM05D000141 ORTHO05D004489 1.3e-59 233.4 166 68.7
FvH4_1g09831 Fragaria vesca HOM05D000141 ORTHO05D004489 1.3e-59 233.4 166 69.3
FAN19G2837 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.3e-59 233.4 166 69.3
THA.LOC104824715 Tarenaya hassleriana HOM05D000141 ORTHO05D004489 1.3e-59 233.4 166 68.7
Glyma.01G155300 Glycine max HOM05D000141 ORTHO05D004489 1.7e-59 233.0 166 68.7
TAR381G1317 Trochodendron aralioides HOM05D000141 ORTHO05D004489 1.7e-59 233.0 165 68.5
Psat4g106800 Pisum sativum HOM05D000141 ORTHO05D004489 2.2e-59 232.6 168 68.5
Ca_25026_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 2.8e-59 232.3 166 67.5
Sed0006453 Sechium edule HOM05D000141 ORTHO05D004489 2.8e-59 232.3 165 70.3
Oeu004295.1 Olea europaea HOM05D000141 ORTHO05D004489 3.7e-59 231.9 166 66.9
Ah.03g149230 Amaranthus hybridus HOM05D000141 ORTHO05D004489 4.9e-59 231.5 169 67.5
Aqoxy6G03061 Aquilegia oxysepala HOM05D000141 ORTHO05D004489 6.3e-59 231.1 166 67.5
Lj4C246T10 Lonicera japonica HOM05D000141 ORTHO05D004489 6.3e-59 231.1 166 68.1
Lj4g0000360 Lotus japonicus HOM05D000141 ORTHO05D004489 8.3e-59 230.7 167 67.1
PSO170G4746 Papaver somniferum HOM05D000141 ORTHO05D004489 8.3e-59 230.7 167 67.7
CSS0002075 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 1.1e-58 230.3 166 68.1
FAN23G1938 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.1e-58 230.3 166 68.7
FAN26G1899 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.1e-58 230.3 166 68.7
Hma1.2p1_0085F.1_g044180 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 1.1e-58 230.3 165 69.1
TPR.G14268 Trifolium pratense HOM05D000141 ORTHO05D004489 1.1e-58 230.3 168 67.9
C09p12180 Brassica napus HOM05D000141 ORTHO05D004489 1.4e-58 229.9 167 70.7
CDE11G0155 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 1.4e-58 229.9 166 68.7
Phvul.003G279200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 1.4e-58 229.9 170 68.8
SEGI_05573 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 1.4e-58 229.9 166 68.1
SEGI_37552 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 1.4e-58 229.9 166 68.1
VMungo0251G0509 Vigna mungo HOM05D000141 ORTHO05D004489 1.4e-58 229.9 168 69.0
unitig_748.g7256 Utricularia gibba HOM05D000141 ORTHO05D004489 1.8e-58 229.6 166 67.5
BcaC04g23100 Brassica carinata HOM05D000141 ORTHO05D004489 2.4e-58 229.2 167 70.7
MELO3C013702.2 Cucumis melo HOM05D000141 ORTHO05D004489 2.4e-58 229.2 166 68.7
CsaV3_UNG147160 Cucumis sativus L. HOM05D000141 ORTHO05D004489 2.4e-58 229.2 166 68.7
Lalb_Chr09g0324901 Lupinus albus HOM05D000141 ORTHO05D004489 2.4e-58 229.2 166 66.9
Medtr8g072430 Medicago truncatula HOM05D000141 ORTHO05D004489 2.4e-58 229.2 167 68.3
TPR.G33746 Trifolium pratense HOM05D000141 ORTHO05D004489 2.4e-58 229.2 166 66.3
Zm00001eb433100 Zea mays HOM05D000141 ORTHO05D004489 2.4e-58 229.2 166 66.3
ClCG10G000070 Citrullus lanatus HOM05D000141 ORTHO05D004489 3.1e-58 228.8 156 71.8
Rhsim10G0188900 Rhododendron simsii HOM05D000141 ORTHO05D004489 3.1e-58 228.8 160 68.8
Sc03g0004200 Simmondsia chinensis HOM05D000141 ORTHO05D004489 4.1e-58 228.4 171 66.1
BolC9t54106H Brassica oleracea HOM05D000141 ORTHO05D004489 5.4e-58 228.0 167 70.7
CANSAT25G2595 Cannabis sativa HOM05D000141 ORTHO05D004489 5.4e-58 228.0 156 72.4
BraA02t09381Z Brassica rapa HOM05D000141 ORTHO05D004489 7.0e-58 227.6 167 69.5
DCAR_000973 Daucus carota HOM05D000141 ORTHO05D004489 7.0e-58 227.6 165 67.9
FAN23G0353 Fragaria x ananassa HOM05D000141 ORTHO05D004489 7.0e-58 227.6 160 70.0
MBI04_g23902_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 7.0e-58 227.6 164 68.9
Sabra16G0308000 Salix brachista HOM05D000141 ORTHO05D004489 7.0e-58 227.6 158 70.9
VMungo1215G2882 Vigna mungo HOM05D000141 ORTHO05D004489 7.0e-58 227.6 166 66.9
CAN.G883.8 Capsicum annuum HOM05D000141 ORTHO05D004489 9.2e-58 227.3 160 68.8
Cc07_g12380 Coffea canephora HOM05D000141 ORTHO05D004489 9.2e-58 227.3 167 68.3
Potri.001G455300 Populus trichocarpa HOM05D000141 ORTHO05D004489 9.2e-58 227.3 158 70.3
Glyma.11G089400 Glycine max HOM05D000141 ORTHO05D004489 1.2e-57 226.9 166 67.5
FAN28G1293 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.6e-57 226.5 158 70.3
Oeu025038.1 Olea europaea HOM05D000141 ORTHO05D004489 1.6e-57 226.5 160 68.8
AUR62003324 Chenopodium quinoa HOM05D000141 ORTHO05D004489 2.0e-57 226.1 171 66.1
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 2.7e-57 225.7 167 68.9
AUR62016257 Chenopodium quinoa HOM05D000141 ORTHO05D004489 2.7e-57 225.7 170 66.5
Lj2C507G14 Lonicera japonica HOM05D000141 ORTHO05D004489 2.7e-57 225.7 167 67.7
Medtr5g025100 Medicago truncatula HOM05D000141 ORTHO05D004489 2.7e-57 225.7 166 65.1
Nitab4.5_0000973g0040 Nicotiana tabacum HOM05D000141 ORTHO05D004489 2.7e-57 225.7 166 65.7
EL10Ac6g14723 Beta vulgaris HOM05D000141 ORTHO05D004489 3.5e-57 225.3 174 64.9
Solyc02g068340.3 Solanum lycopersicum HOM05D000141 ORTHO05D004489 3.5e-57 225.3 160 67.5
Sopen02g017470 Solanum pennellii HOM05D000141 ORTHO05D004489 3.5e-57 225.3 160 67.5
PGSC0003DMG400009428 Solanum tuberosum HOM05D000141 ORTHO05D004489 3.5e-57 225.3 160 67.5
Zm00001eb067080 Zea mays HOM05D000141 ORTHO05D004489 3.5e-57 225.3 166 65.7
HPP92_022027 Vanilla planifolia HOM05D000141 ORTHO05D004489 4.5e-57 224.9 166 67.5
ATR0605G264 Amborella trichopoda HOM05D000141 ORTHO05D004489 5.9e-57 224.6 168 65.5
Nitab4.5_0011544g0030 Nicotiana tabacum HOM05D000141 ORTHO05D004489 7.7e-57 224.2 166 65.7
Migut.K01161 Erythranthe guttata HOM05D000141 ORTHO05D004489 1.0e-56 223.8 158 69.0
Phvul.002G120200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 1.7e-56 223.0 166 65.7
MSTRG.3653 Avicennia marina HOM05D000141 ORTHO05D004489 6.6e-56 221.1 166 66.3
Hund19674 Selenicereus undatus HOM05D000141 ORTHO05D004489 1.1e-55 220.3 168 64.9
SGA_v2.0_scaffold45G17090 Striga asiatica HOM05D000141 ORTHO05D004489 1.1e-55 220.3 158 67.1
AagrBONN_evm.TU.Sc2ySwM_228.4247 Anthoceros agrestis HOM05D000141 ORTHO05D004489 1.9e-55 219.5 168 64.9
ECA238G3829 Erigeron canadensis HOM05D000141 ORTHO05D004489 1.9e-55 219.5 167 65.9
Lsat_1_v5_gn_2_72800 Lactuca sativa HOM05D000141 ORTHO05D004489 1.9e-55 219.5 168 65.5
SGA_v2.0_scaffold229G43289 Striga asiatica HOM05D000141 ORTHO05D004489 2.5e-55 219.2 158 68.4
Mapoly0012s0174 Marchantia polymorpha HOM05D000141 ORTHO05D004489 9.5e-55 217.2 173 63.0
Pp3c11_5890 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.2e-54 216.9 175 64.0
Pp3c2_29920 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.6e-54 216.5 174 63.8
Psat2g146880 Pisum sativum HOM05D000141 ORTHO05D004489 6.1e-54 214.5 162 64.8
HanXRQChr14g0443671 Helianthus annuus HOM05D000141 ORTHO05D004489 3.0e-53 212.2 161 67.1
Pp3c15_3730 Physcomitrium patens HOM05D000141 ORTHO05D004489 3.0e-53 212.2 170 62.9
Pp3c9_4530 Physcomitrium patens HOM05D000141 ORTHO05D004489 4.0e-53 211.8 170 62.9
SalBow5G4210 Salvia bowleyana HOM05D000141 ORTHO05D004489 6.8e-53 211.1 165 66.1
MBI01_g31984_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 4.4e-52 208.4 164 62.2
Peaxi162Scf00981g00112 Petunia axillaris HOM05D000141 ORTHO05D004489 5.7e-52 208.0 163 64.4
CBR_g9092 Chara braunii HOM05D000141 ORTHO05D004489 1.4e-50 203.4 183 55.2
Rhsim08G0024500 Rhododendron simsii HOM05D000141 ORTHO05D004489 3.2e-50 202.2 166 59.0
SMO118G0228 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 9.2e-50 200.7 125 75.2
SMO222G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 9.2e-50 200.7 125 75.2
CsaV3_3G000080 Cucumis sativus L. HOM05D000141 ORTHO05D004489 1.3e-48 196.8 166 62.0
CBR_g8104 Chara braunii HOM05D000141 ORTHO05D004489 1.1e-47 193.7 196 50.0
vmacro18483 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 3.3e-47 192.2 165 56.4
TAR374G1151 Trochodendron aralioides HOM05D000141 ORTHO05D004489 5.6e-47 191.4 155 61.9
Cre06.g278125 Chlamydomonas reinhardtii HOM05D000141 ORTHO05D004489 3.6e-46 188.7 166 56.0
PRCOL_00006273 Prasinoderma coloniale HOM05D000141 ORTHO05D004489 5.8e-44 181.4 124 68.5
MCO02G386 Micromonas commoda HOM05D000141 ORTHO05D004489 1.6e-41 173.3 124 64.5
HPP92_023789 Vanilla planifolia HOM05D000141 ORTHO05D004489 1.7e-40 169.9 158 48.7
AUR62029523 Chenopodium quinoa HOM05D000141 ORTHO05D004489 1.2e-36 157.1 170 51.8
vmacro20418 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 2.6e-36 156.0 175 50.9
Sed0022500 Sechium edule HOM05D000141 ORTHO05D004489 1.3e-35 153.7 116 69.0
Actinidia17134 Actinidia chinensis HOM05D000141 ORTHO05D004489 5.8e-20 101.7 78 67.9


User provided reference genes

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