Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32495 Sapria himalayana HOM05D000141 ORTHO05D004489 1.1e-59 233.0 115 100.0
Manes.01G158800 Manihot esculenta HOM05D000141 ORTHO05D004489 1.2e-29 133.3 90 73.3
SalBow5G4210 Salvia bowleyana HOM05D000141 ORTHO05D004489 1.2e-29 133.3 94 68.1
Haze_03652 Corylus avellana HOM05D000141 ORTHO05D004489 2.7e-29 132.1 94 70.2
ClCG10G000070 Citrullus lanatus HOM05D000141 ORTHO05D004489 4.6e-29 131.3 90 71.1
arahy.Tifrunner.gnm1.ann1.C6YA57 Arachis hypogaea HOM05D000141 ORTHO05D004489 1.0e-28 130.2 90 71.1
arahy.Tifrunner.gnm1.ann1.SMPN38 Arachis hypogaea HOM05D000141 ORTHO05D004489 1.0e-28 130.2 90 71.1
MELO3C013702.2 Cucumis melo HOM05D000141 ORTHO05D004489 1.0e-28 130.2 90 71.1
Ah.03g149230 Amaranthus hybridus HOM05D000141 ORTHO05D004489 1.3e-28 129.8 105 64.8
TWI31G1431 Tripterygium wilfordii HOM05D000141 ORTHO05D004489 3.0e-28 128.6 90 72.2
EL10Ac6g14723 Beta vulgaris HOM05D000141 ORTHO05D004489 3.9e-28 128.3 90 71.1
CsaV3_3G000070 Cucumis sativus L. HOM05D000141 ORTHO05D004489 3.9e-28 128.3 90 70.0
QL06p053568 Quercus lobata HOM05D000141 ORTHO05D004489 3.9e-28 128.3 90 70.0
CiPaw.08G183100 Carya illinoinensis HOM05D000141 ORTHO05D004489 8.7e-28 127.1 91 68.1
Lalb_Chr16g0391741 Lupinus albus HOM05D000141 ORTHO05D004489 8.7e-28 127.1 94 67.0
AUR62003324 Chenopodium quinoa HOM05D000141 ORTHO05D004489 1.1e-27 126.7 85 72.9
AUR62016257 Chenopodium quinoa HOM05D000141 ORTHO05D004489 1.1e-27 126.7 85 72.9
Sed0006453 Sechium edule HOM05D000141 ORTHO05D004489 1.1e-27 126.7 90 68.9
Hund19673 Selenicereus undatus HOM05D000141 ORTHO05D004489 1.1e-27 126.7 86 72.1
Potri.011G146700 Populus trichocarpa HOM05D000141 ORTHO05D004489 1.5e-27 126.3 90 67.8
Lalb_Chr09g0324901 Lupinus albus HOM05D000141 ORTHO05D004489 1.9e-27 125.9 94 62.8
Aqoxy6G03061 Aquilegia oxysepala HOM05D000141 ORTHO05D004489 3.3e-27 125.2 94 66.0
Sabra16G0308000 Salix brachista HOM05D000141 ORTHO05D004489 3.3e-27 125.2 90 67.8
Atru.chr3.3 Acer truncatum HOM05D000141 ORTHO05D004489 4.3e-27 124.8 90 68.9
FAN28G1293 Fragaria x ananassa HOM05D000141 ORTHO05D004489 4.3e-27 124.8 94 67.0
Prupe.7G188900 Prunus persica HOM05D000141 ORTHO05D004489 4.3e-27 124.8 90 66.7
PGSC0003DMG400009428 Solanum tuberosum HOM05D000141 ORTHO05D004489 4.3e-27 124.8 94 66.0
MSTRG.3653 Avicennia marina HOM05D000141 ORTHO05D004489 5.7e-27 124.4 92 64.1
Ciclev10024719m.g Citrus clementina HOM05D000141 ORTHO05D004489 5.7e-27 124.4 94 63.8
Glyma.09G194900 Glycine max HOM05D000141 ORTHO05D004489 5.7e-27 124.4 90 68.9
Nitab4.5_0028853g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 5.7e-27 124.4 94 66.0
Lj2g0025271 Lotus japonicus HOM05D000141 ORTHO05D004489 7.4e-27 124.0 90 66.7
Phvul.003G279200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 7.4e-27 124.0 90 68.9
Solyc02g068340.3 Solanum lycopersicum HOM05D000141 ORTHO05D004489 7.4e-27 124.0 94 66.0
COL.COLO4_22572 Corchorus olitorius HOM05D000141 ORTHO05D004489 9.6e-27 123.6 94 64.9
Duzib147G0825 Durio zibethinus HOM05D000141 ORTHO05D004489 9.6e-27 123.6 90 65.6
FvH4_1g09831 Fragaria vesca HOM05D000141 ORTHO05D004489 9.6e-27 123.6 94 66.0
FAN19G2837 Fragaria x ananassa HOM05D000141 ORTHO05D004489 9.6e-27 123.6 94 66.0
Gorai.003G001000 Gossypium raimondii HOM05D000141 ORTHO05D004489 9.6e-27 123.6 90 64.4
Lj4g0000360 Lotus japonicus HOM05D000141 ORTHO05D004489 9.6e-27 123.6 90 67.8
Peaxi162Scf00981g00112 Petunia axillaris HOM05D000141 ORTHO05D004489 9.6e-27 123.6 94 66.0
Sc03g0004200 Simmondsia chinensis HOM05D000141 ORTHO05D004489 9.6e-27 123.6 90 67.8
SGA_v2.0_scaffold45G17090 Striga asiatica HOM05D000141 ORTHO05D004489 9.6e-27 123.6 89 66.3
CAN.G883.8 Capsicum annuum HOM05D000141 ORTHO05D004489 1.3e-26 123.2 94 64.9
Cpa.g.sc17.14 Carica papaya HOM05D000141 ORTHO05D004489 1.3e-26 123.2 90 66.7
Hma1.2p1_0085F.1_g044180 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 1.3e-26 123.2 90 66.7
VMungo0251G0509 Vigna mungo HOM05D000141 ORTHO05D004489 1.3e-26 123.2 90 68.9
GSVIVG01026414001 Vitis vinifera HOM05D000141 ORTHO05D004489 1.3e-26 123.2 90 67.8
ATR0605G264 Amborella trichopoda HOM05D000141 ORTHO05D004489 1.6e-26 122.9 94 60.6
Glyma.16G111200 Glycine max HOM05D000141 ORTHO05D004489 1.6e-26 122.9 90 67.8
Gohir.A02G179100 Gossypium hirsutum HOM05D000141 ORTHO05D004489 1.6e-26 122.9 90 64.4
Migut.K01161 Erythranthe guttata HOM05D000141 ORTHO05D004489 2.1e-26 122.5 102 61.8
MBI04_g23902_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 2.1e-26 122.5 94 62.8
RcHm_v2.0_Chr2g0096601 Rosa chinensis HOM05D000141 ORTHO05D004489 2.1e-26 122.5 94 64.9
Sopen02g017470 Solanum pennellii HOM05D000141 ORTHO05D004489 2.1e-26 122.5 94 63.8
Thecc.01G000500 Theobroma cacao HOM05D000141 ORTHO05D004489 2.1e-26 122.5 90 64.4
Eucgr.I02176 Eucalyptus grandis HOM05D000141 ORTHO05D004489 2.8e-26 122.1 90 67.8
FAN23G1938 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.8e-26 122.1 94 64.9
FAN26G1899 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.8e-26 122.1 94 64.9
PSO170G4746 Papaver somniferum HOM05D000141 ORTHO05D004489 2.8e-26 122.1 90 64.4
FAN23G0353 Fragaria x ananassa HOM05D000141 ORTHO05D004489 4.8e-26 121.3 94 64.9
Nn6g31557 Nelumbo nucifera HOM05D000141 ORTHO05D004489 4.8e-26 121.3 94 61.7
Nitab4.5_0017516g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 4.8e-26 121.3 94 63.8
Rhsim10G0188900 Rhododendron simsii HOM05D000141 ORTHO05D004489 4.8e-26 121.3 90 65.6
SGA_v2.0_scaffold229G43289 Striga asiatica HOM05D000141 ORTHO05D004489 4.8e-26 121.3 84 67.9
VMungo1215G2882 Vigna mungo HOM05D000141 ORTHO05D004489 4.8e-26 121.3 94 62.8
Potri.001G455300 Populus trichocarpa HOM05D000141 ORTHO05D004489 6.3e-26 120.9 90 64.4
THA.LOC104824715 Tarenaya hassleriana HOM05D000141 ORTHO05D004489 6.3e-26 120.9 90 67.8
Cc07_g12380 Coffea canephora HOM05D000141 ORTHO05D004489 8.2e-26 120.6 94 61.7
Gohir.D03G000600 Gossypium hirsutum HOM05D000141 ORTHO05D004489 8.2e-26 120.6 90 63.3
Oeu004295.1 Olea europaea HOM05D000141 ORTHO05D004489 8.2e-26 120.6 94 58.5
Phvul.002G120200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 8.2e-26 120.6 94 62.8
CSS0021249 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 1.1e-25 120.2 90 65.6
Glyma.11G089400 Glycine max HOM05D000141 ORTHO05D004489 1.4e-25 119.8 90 64.4
Sp2g30770 Schrenkiella parvula HOM05D000141 ORTHO05D004489 1.4e-25 119.8 90 66.7
TAR381G1317 Trochodendron aralioides HOM05D000141 ORTHO05D004489 1.4e-25 119.8 90 66.7
vmacro20418 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 1.4e-25 119.8 94 60.6
CARHR053030 Cardamine hirsuta HOM05D000141 ORTHO05D004489 1.8e-25 119.4 90 66.7
DCAR_000973 Daucus carota HOM05D000141 ORTHO05D004489 1.8e-25 119.4 90 65.6
MBI01_g31984_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 1.8e-25 119.4 90 63.3
Aa31LG1G14480 Aethionema arabicum HOM05D000522 ORTHO05D004489 2.4e-25 119.0 90 65.6
Oeu025038.1 Olea europaea HOM05D000141 ORTHO05D004489 2.4e-25 119.0 94 58.5
Ca_25026_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 3.1e-25 118.6 94 60.6
Dinv19108 Davidia involucrata HOM05D000141 ORTHO05D004489 3.1e-25 118.6 90 65.6
Thhalv10003527m.g Eutrema salsugineum HOM05D000141 ORTHO05D004489 4.1e-25 118.2 94 62.8
Glyma.01G155300 Glycine max HOM05D000141 ORTHO05D004489 4.1e-25 118.2 90 63.3
Carub.0008s2860 Capsella rubella HOM05D000141 ORTHO05D004489 5.3e-25 117.9 90 65.6
MD15G1226100 Malus domestica HOM05D000141 ORTHO05D004489 5.3e-25 117.9 90 62.2
Medtr8g072430 Medicago truncatula HOM05D000141 ORTHO05D004489 5.3e-25 117.9 90 64.4
CANSAT25G2595 Cannabis sativa HOM05D000141 ORTHO05D004489 9.0e-25 117.1 90 64.4
AL8G45710 Arabidopsis lyrata HOM05D000141 ORTHO05D004489 1.2e-24 116.7 90 64.4
AT5G65930 Arabidopsis thaliana HOM05D000141 ORTHO05D004489 1.2e-24 116.7 90 64.4
MD02G1106300 Malus domestica HOM05D000141 ORTHO05D004489 1.2e-24 116.7 91 63.7
SEGI_37552 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 1.2e-24 116.7 90 62.2
CDE11G0155 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 2.0e-24 115.9 90 63.3
TPR.G14268 Trifolium pratense HOM05D000141 ORTHO05D004489 2.0e-24 115.9 90 63.3
Lj4C246T10 Lonicera japonica HOM05D000141 ORTHO05D004489 2.6e-24 115.5 94 60.6
Os04g0666900 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004489 4.5e-24 114.8 90 66.7
Lj2C507G14 Lonicera japonica HOM05D000141 ORTHO05D004489 7.6e-24 114.0 90 64.4
Psat4g106800 Pisum sativum HOM05D000141 ORTHO05D004489 1.3e-23 113.2 91 61.5
TPR.G33741 Trifolium pratense HOM05D000141 ORTHO05D004489 1.7e-23 112.8 90 61.1
Medtr5g025100 Medicago truncatula HOM05D000141 ORTHO05D004489 2.2e-23 112.5 90 62.2
HanXRQChr14g0443671 Helianthus annuus HOM05D000141 ORTHO05D004489 1.1e-22 110.2 90 61.1
PGR119G2404 Punica granatum HOM05D000141 ORTHO05D004489 1.1e-22 110.2 94 63.8
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 1.4e-22 109.8 91 62.6
ECA238G3829 Erigeron canadensis HOM05D000141 ORTHO05D004489 1.4e-22 109.8 93 61.3
Zm00001eb067080 Zea mays HOM05D000141 ORTHO05D004489 1.4e-22 109.8 90 63.3
Psat2g146880 Pisum sativum HOM05D000141 ORTHO05D004489 2.5e-22 109.0 94 56.4
Lsat_1_v5_gn_2_72800 Lactuca sativa HOM05D000141 ORTHO05D004489 3.2e-22 108.6 90 61.1
BcaB04g20133 Brassica carinata HOM05D000141 ORTHO05D004489 4.2e-22 108.2 90 62.2
Rhsim08G0024500 Rhododendron simsii HOM05D000141 ORTHO05D004489 4.2e-22 108.2 90 61.1
A09p10250 Brassica napus HOM05D000141 ORTHO05D004489 7.2e-22 107.5 90 62.2
BraA09t36670Z Brassica rapa HOM05D000141 ORTHO05D004489 7.2e-22 107.5 90 62.2
HPP92_022037 Vanilla planifolia HOM05D000141 ORTHO05D004489 9.3e-22 107.1 80 60.0
BcaC04g23100 Brassica carinata HOM05D000141 ORTHO05D004489 1.6e-21 106.3 90 61.1
C09p12180 Brassica napus HOM05D000141 ORTHO05D004489 1.6e-21 106.3 90 61.1
BolC9t54106H Brassica oleracea HOM05D000141 ORTHO05D004489 1.6e-21 106.3 90 61.1
AagrBONN_evm.TU.Sc2ySwM_228.4247 Anthoceros agrestis HOM05D000141 ORTHO05D004489 7.9e-21 104.0 94 56.4
Pp3c15_3730 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.8e-20 102.8 94 54.3
vmacro18483 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 1.8e-20 102.8 81 64.2
BraA02t09381Z Brassica rapa HOM05D000141 ORTHO05D004489 1.5e-19 99.8 82 63.4
SMO118G0228 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 3.3e-19 98.6 85 56.5
SMO222G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 3.3e-19 98.6 85 56.5
HPP92_023789 Vanilla planifolia HOM05D000141 ORTHO05D004489 4.3e-19 98.2 90 51.1
Mapoly0012s0174 Marchantia polymorpha HOM05D000141 ORTHO05D004489 5.7e-19 97.8 94 50.0
Pp3c9_4530 Physcomitrium patens HOM05D000141 ORTHO05D004489 4.8e-18 94.7 94 51.1
Pp3c2_29920 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.1e-17 93.6 90 53.3
CBR_g9092 Chara braunii HOM05D000141 ORTHO05D004489 5.3e-17 91.3 83 54.2
arahy.Tifrunner.gnm1.ann1.77JLPP Arachis hypogaea HOM05D000141 ORTHO05D004489 9.0e-17 90.5 66 63.6
arahy.Tifrunner.gnm1.ann1.L4A5BH Arachis hypogaea HOM05D000141 ORTHO05D004489 9.0e-17 90.5 66 63.6
Pp3c11_5890 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.5e-16 89.7 94 50.0
CSS0002075 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 2.6e-16 89.0 90 51.1
CBR_g8104 Chara braunii HOM05D000141 ORTHO05D004489 7.7e-16 87.4 83 50.6
Sabra11G0131600 Salix brachista HOM05D000141 ORTHO05D004489 2.2e-15 85.9 62 67.7
Psat6g138520 Pisum sativum HOM05D000141 ORTHO05D004489 1.1e-14 83.6 89 46.1
CsaV3_UNG147160 Cucumis sativus L. HOM05D000141 ORTHO05D004489 2.1e-13 79.3 54 68.5
CDE02G4588 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 2.7e-13 79.0 66 59.1
Ca_22442_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 7.9e-13 77.4 58 65.5
Ca_22449_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 7.9e-13 77.4 58 65.5
Cre06.g278125 Chlamydomonas reinhardtii HOM05D000141 ORTHO05D004489 3.9e-12 75.1 88 45.5


User provided reference genes

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