Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32450 Sapria himalayana HOM05D000107 ORTHO05D000062 3.0e-137 491.9 257 100.0
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-17 94.4 73 56.2
SHI23323 Sapria himalayana HOM05D000107 ORTHO05D000062 5.3e-17 92.4 73 57.5
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 5.3e-17 92.4 73 56.2
SHI52728 Sapria himalayana HOM05D000107 ORTHO05D000062 5.3e-17 92.4 73 56.2
SHI53250 Sapria himalayana HOM05D000107 ORTHO05D000062 5.3e-17 92.4 73 56.2
PGSC0003DMG400013059 Solanum tuberosum HOM05D000107 ORTHO05D000062 6.9e-17 92.0 78 55.1
SHI31941 Sapria himalayana HOM05D000107 ORTHO05D000062 9.1e-17 91.7 73 54.8
CAN.G1048.1 Capsicum annuum HOM05D000107 ORTHO05D000062 3.4e-16 89.7 67 56.7
SHI04875 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-15 87.8 54 72.2
SHI34959 Sapria himalayana HOM05D000648 ORTHO05D000568 1.6e-13 80.9 109 40.4
Sopen10g023130 Solanum pennellii HOM05D000107 ORTHO05D000062 6.1e-13 79.0 155 30.3
SHI38877 Sapria himalayana HOM05D000107 ORTHO05D000062 5.2e-12 75.9 118 40.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.7e-12 75.5 105 38.1
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.7e-12 75.5 105 38.1
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.7e-12 75.5 105 38.1
SHI39464 Sapria himalayana HOM05D000648 ORTHO05D009534 6.7e-12 75.5 67 53.7
SHI09706 Sapria himalayana HOM05D000648 ORTHO05D000062 1.5e-11 74.3 119 42.9
ECA234G1212 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.3e-11 73.2 102 38.2
Aa31sc99G60 Aethionema arabicum HOM05D000107 ORTHO05D000062 7.4e-11 72.0 128 34.4
HanXRQChr13g0388361 Helianthus annuus HOM05D000107 ORTHO05D000062 7.4e-11 72.0 73 46.6
Ca_23066_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.3e-10 71.2 94 42.6
TPR.G40433 Trifolium pratense HOM05D000107 ORTHO05D000062 1.3e-10 71.2 78 46.2
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 1.7e-10 70.9 80 47.5
EL10Ac1g01791 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-10 70.1 124 30.6
SHI48194 Sapria himalayana HOM05D000107 ORTHO05D000062 2.8e-10 70.1 130 37.7
Aa31sc106G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 3.7e-10 69.7 130 33.8
CAN.G479.10 Capsicum annuum HOM05D000107 ORTHO05D000062 3.7e-10 69.7 72 48.6
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.8e-10 69.3 77 46.8
SHI13502 Sapria himalayana HOM05D000107 ORTHO05D000062 4.8e-10 69.3 145 35.2
HanXRQChr03g0071531 Helianthus annuus HOM05D000107 ORTHO05D000062 6.3e-10 68.9 76 44.7
HanXRQChr04g0099071 Helianthus annuus HOM05D000107 ORTHO05D000062 6.3e-10 68.9 76 44.7
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 6.3e-10 68.9 76 44.7
ECA236G0159 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.2e-10 68.6 79 45.6
ECA246G4886 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-09 68.2 102 36.3
Atru.chr11.622 Acer truncatum HOM05D000107 ORTHO05D000062 1.4e-09 67.8 80 41.2
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 1.4e-09 67.8 81 39.5
PSO210G0296 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-09 67.8 80 42.5
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 2.4e-09 67.0 80 41.2
Atru.chr7.634 Acer truncatum HOM05D000107 ORTHO05D000062 2.4e-09 67.0 80 41.2
SHI06496 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-09 67.0 150 34.0
TPR.G16983 Trifolium pratense HOM05D000107 ORTHO05D000062 3.1e-09 66.6 77 44.2
Aqoxy4G00525 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 41.2
PSO063G5761 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO210G2390 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO210G4818 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO210G4883 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO210G6963 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO421G0660 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO461G0010 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO541G0711 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO566G0081 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO675G6583 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO724G0950 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
PSO782G5410 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-09 66.2 80 42.5
SHI35166 Sapria himalayana HOM05D000107 ORTHO05D000568 4.1e-09 66.2 126 35.7
SHI47468 Sapria himalayana HOM05D000107 ORTHO05D000062 4.1e-09 66.2 48 60.4
THA.LOC109116509 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 4.1e-09 66.2 94 39.4
Atru.chr2.2655 Acer truncatum HOM05D000107 ORTHO05D000062 5.3e-09 65.9 80 41.2
CAN.G521.14 Capsicum annuum HOM05D000107 ORTHO05D000062 5.3e-09 65.9 72 45.8
SHI42700 Sapria himalayana HOM05D007949 ORTHO05D000062 5.3e-09 65.9 71 40.8
Sopen11g015690 Solanum pennellii HOM05D000107 ORTHO05D000062 5.3e-09 65.9 59 49.2
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 5.3e-09 65.9 94 40.4
TPR.G28493 Trifolium pratense HOM05D000107 ORTHO05D000062 5.3e-09 65.9 78 43.6
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 7.0e-09 65.5 80 40.0
BolC9t54535H Brassica oleracea HOM05D001086 ORTHO05D001112 7.0e-09 65.5 92 42.4
ECA234G1620 Erigeron canadensis HOM05D000185 ORTHO05D000105 7.0e-09 65.5 141 31.9
SHI48168 Sapria himalayana HOM05D000107 ORTHO05D000062 7.0e-09 65.5 130 34.6
TPR.G17876 Trifolium pratense HOM05D000107 ORTHO05D000062 7.0e-09 65.5 77 44.2
ECA096G0002 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.1e-09 65.1 76 43.4
Aqoxy2G01704 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.2e-08 64.7 80 41.2
QL05p061366 Quercus lobata HOM05D000107 ORTHO05D000062 1.2e-08 64.7 78 37.2
Sopen03g020940 Solanum pennellii HOM05D000107 ORTHO05D000062 1.2e-08 64.7 148 31.8
TWI15G0534 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.2e-08 64.7 76 44.7
Ca_19967_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.6e-08 64.3 77 45.5
ECA248G3962 Erigeron canadensis HOM05D000006 ORTHO05D000062 1.6e-08 64.3 64 46.9
PGSC0003DMG400031541 Solanum tuberosum HOM05D000107 ORTHO05D000062 1.6e-08 64.3 80 40.0
Atru.chr11.112 Acer truncatum HOM05D000107 ORTHO05D000062 2.0e-08 63.9 80 40.0
Ca_30309_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000568 2.0e-08 63.9 114 37.7
SHI23324 Sapria himalayana HOM05D000107 ORTHO05D000568 2.0e-08 63.9 125 33.6
SHI36013 Sapria himalayana HOM05D000107 ORTHO05D000062 2.0e-08 63.9 81 39.5
TPR.G14757 Trifolium pratense HOM05D000107 ORTHO05D000062 2.6e-08 63.5 77 44.2
TPR.G36035 Trifolium pratense HOM05D000107 ORTHO05D000062 2.6e-08 63.5 77 40.3
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.6e-08 63.5 76 44.7
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.5e-08 63.2 76 42.1
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 4.5e-08 62.8 77 40.3
Rhsim11G0013600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-08 62.8 81 42.0
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.5e-08 62.8 76 44.7
PSO724G0727 Papaver somniferum HOM05D000107 ORTHO05D000062 5.9e-08 62.4 80 40.0
SHI17046 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-08 62.4 81 38.3
Sopen06g007340 Solanum pennellii HOM05D000107 ORTHO05D000034 5.9e-08 62.4 77 39.0
TPR.G21222 Trifolium pratense HOM05D000107 ORTHO05D000062 5.9e-08 62.4 103 35.9
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.9e-08 62.4 76 43.4
TWI63G1101 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.9e-08 62.4 102 35.3
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.9e-08 62.4 76 43.4
SHI11223 Sapria himalayana HOM05D007985 ORTHO05D000062 7.7e-08 62.0 179 29.6
SHI22500 Sapria himalayana HOM05D000107 ORTHO05D000062 7.7e-08 62.0 50 50.0
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.7e-08 62.0 76 44.7
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.7e-08 62.0 76 44.7
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.7e-08 62.0 76 44.7
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 1.0e-07 61.6 81 40.7
PSO675G2035 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-07 61.6 80 38.8
PSO675G7714 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-07 61.6 111 31.5
SHI06762 Sapria himalayana HOM05D000107 ORTHO05D000568 1.0e-07 61.6 59 50.8
ECA236G4269 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-07 61.2 71 42.3
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-07 60.8 80 42.5
SHI49288 Sapria himalayana HOM05D000648 ORTHO05D000568 1.7e-07 60.8 108 37.0
Ca_07081_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.2e-07 60.5 96 36.5
PSO017G6866 Papaver somniferum HOM05D000107 ORTHO05D000062 2.2e-07 60.5 80 38.8
PSO339G5279 Papaver somniferum HOM05D000107 ORTHO05D000062 2.2e-07 60.5 107 30.8
PSO541G2440 Papaver somniferum HOM05D000107 ORTHO05D000062 2.2e-07 60.5 107 30.8
TPR.G14753 Trifolium pratense HOM05D000107 ORTHO05D000062 2.2e-07 60.5 80 38.8
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 2.2e-07 60.5 77 40.3
MELO3C010327.2 Cucumis melo HOM05D000107 ORTHO05D000062 2.9e-07 60.1 80 37.5
ECA234G2615 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.9e-07 60.1 72 45.8
PSO675G5010 Papaver somniferum HOM05D000107 ORTHO05D000062 2.9e-07 60.1 107 31.8
SHI01715 Sapria himalayana HOM05D000107 ORTHO05D000062 2.9e-07 60.1 134 33.6
TWI23G1198 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.9e-07 60.1 73 46.6
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 3.8e-07 59.7 75 38.7
PSO675G0798 Papaver somniferum HOM05D000107 ORTHO05D000062 3.8e-07 59.7 100 33.0
TWI31G1349 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.8e-07 59.7 73 46.6
Aqoxy4G01289 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.0e-07 59.3 74 39.2
ECA238G1936 Erigeron canadensis HOM05D000006 ORTHO05D000062 5.0e-07 59.3 73 39.7
PSO541G0392 Papaver somniferum HOM05D000107 ORTHO05D000062 5.0e-07 59.3 80 40.0
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-07 59.3 81 39.5
SHI27135 Sapria himalayana HOM05D000107 ORTHO05D000062 5.0e-07 59.3 111 30.6
TPR.G33094 Trifolium pratense HOM05D000107 ORTHO05D000062 5.0e-07 59.3 77 41.6
Ah.10g029050 Amaranthus hybridus HOM05D000107 ORTHO05D000568 6.5e-07 58.9 144 31.2
PSO675G5616 Papaver somniferum HOM05D000107 ORTHO05D000062 6.5e-07 58.9 104 31.7
Atru.chr4.2612 Acer truncatum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 75 38.7
PSO017G6416 Papaver somniferum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 107 30.8
PSO210G5494 Papaver somniferum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 77 40.3
PSO210G6071 Papaver somniferum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 81 38.3
PSO210G7759 Papaver somniferum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 77 39.0
PSO675G0591 Papaver somniferum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 107 30.8
PSO832G1634 Papaver somniferum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 107 30.8
SHI22892 Sapria himalayana HOM05D007949 ORTHO05D010250 8.5e-07 58.5 106 40.6
Sopen10g021560 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-07 58.5 100 37.0
PGSC0003DMG400011857 Solanum tuberosum HOM05D000107 ORTHO05D000062 8.5e-07 58.5 80 41.2
CANSAT01G1656 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 57.8 76 36.8
CANSAT21G0350 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 57.8 76 36.8
CANSAT80G2014 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 57.8 76 36.8
SHI50426 Sapria himalayana HOM05D000648 ORTHO05D000568 1.5e-06 57.8 152 30.9
Ca_20043_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.9e-06 57.4 81 38.3
PSO210G6847 Papaver somniferum HOM05D000107 ORTHO05D000062 1.9e-06 57.4 80 36.2
TWI36G0385 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.9e-06 57.4 80 37.5
CSS0025982 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.5e-06 57.0 77 40.3
Ca_03768_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-06 57.0 70 37.1
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-06 57.0 81 40.7
AUR62035727 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.2e-06 56.6 73 41.1
AUR62042306 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.2e-06 56.6 73 41.1
PSO063G5208 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-06 56.6 77 40.3
PSO782G0148 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-06 56.6 77 42.9
SHI36208 Sapria himalayana HOM05D000616 ORTHO05D000233 3.2e-06 56.6 141 27.7
SHI43475 Sapria himalayana HOM05D000107 ORTHO05D000568 3.2e-06 56.6 73 42.5
TPR.G16817 Trifolium pratense HOM05D000107 ORTHO05D000062 3.2e-06 56.6 74 39.2
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.2e-06 56.6 82 37.8
VMungo0464G1759 Vigna mungo HOM05D000107 ORTHO05D011906 3.2e-06 56.6 75 38.7
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-06 56.2 81 38.3
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-06 56.2 81 38.3
CSS0021554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-06 56.2 81 38.3
CSS0043289 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-06 56.2 81 38.3
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-06 56.2 81 38.3
THA.LOC109116462 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 4.2e-06 56.2 74 47.3
TAR472G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.2e-06 56.2 82 37.8
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.2e-06 56.2 84 34.5
CSS0023291 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.5e-06 55.8 81 38.3
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-06 55.8 81 39.5
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-06 55.8 73 41.1
RhsimUnG0146400 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-06 55.8 77 36.4
Atru.chr6.556 Acer truncatum HOM05D000107 ORTHO05D000062 7.2e-06 55.5 61 37.7
Aqoxy4G02090 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 7.2e-06 55.5 74 40.5
PSO017G0673 Papaver somniferum HOM05D000107 ORTHO05D000062 7.2e-06 55.5 77 41.6
PGR004G2540 Punica granatum HOM05D000107 ORTHO05D000062 7.2e-06 55.5 76 40.8
Aqoxy6G01994 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 9.4e-06 55.1 78 39.7
CANSAT64G0358 Cannabis sativa HOM05D000107 ORTHO05D000062 9.4e-06 55.1 68 35.3
PSO781G0158 Papaver somniferum HOM05D000107 ORTHO05D000062 9.4e-06 55.1 77 41.6
TPR.G12918 Trifolium pratense HOM05D000107 ORTHO05D000062 9.4e-06 55.1 66 40.9
TAR709G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.4e-06 55.1 80 38.8


User provided reference genes

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