Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 1.2e-80 303.1 149 100.0
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.6e-20 101.3 72 68.1
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.9e-19 99.8 72 66.7
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 3.3e-19 99.0 72 66.7
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 3.3e-19 99.0 72 66.7
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 4.3e-19 98.6 72 66.7
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 7.3e-19 97.8 72 66.7
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.3e-18 97.1 72 65.3
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.6e-18 96.7 72 65.3
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.8e-18 95.9 72 65.3
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 3.6e-18 95.5 72 65.3
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 8.1e-18 94.4 72 63.9
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 8.1e-18 94.4 72 63.9
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.1e-18 94.4 72 65.3
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-17 93.6 72 63.9
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 1.4e-17 93.6 72 63.9
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 1.4e-17 93.6 72 63.9
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 1.4e-17 93.6 72 63.9
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.4e-17 93.6 72 63.9
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 1.4e-17 93.6 72 63.9
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 2.4e-17 92.8 72 63.9
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 2.4e-17 92.8 72 63.9
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 2.4e-17 92.8 72 63.9
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 2.4e-17 92.8 72 63.9
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 2.4e-17 92.8 72 63.9
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 3.1e-17 92.4 72 63.9
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.1e-17 92.4 72 63.9
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 3.1e-17 92.4 72 63.9
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 4.0e-17 92.0 72 63.9
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 5.3e-17 91.7 72 63.9
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 6.9e-17 91.3 72 63.9
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.9e-17 91.3 72 63.9
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 6.9e-17 91.3 72 63.9
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 1.2e-16 90.5 72 62.5
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 1.2e-16 90.5 72 62.5
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 1.2e-16 90.5 72 62.5
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 2.0e-16 89.7 72 62.5
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 2.0e-16 89.7 72 62.5
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.4e-16 89.0 72 59.7
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 3.4e-16 89.0 72 62.5
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 3.4e-16 89.0 72 62.5
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 3.4e-16 89.0 69 63.8
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 1.7e-15 86.7 72 61.1
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 1.7e-15 86.7 72 61.1
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 1.7e-15 86.7 72 61.1
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 1.7e-15 86.7 72 61.1
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 1.7e-15 86.7 72 58.3
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 2.9e-15 85.9 62 66.1
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.9e-15 85.9 64 64.1
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 4.9e-15 85.1 68 60.3
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 8.4e-15 84.3 71 60.6
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 8.4e-15 84.3 71 60.6
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 8.4e-15 84.3 71 60.6
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 1.4e-14 83.6 72 59.7
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 2.4e-14 82.8 62 64.5
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 3.2e-14 82.4 72 56.9
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 5.4e-14 81.6 64 60.9
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 7.1e-14 81.3 64 62.5
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.3e-14 80.9 67 58.2
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 1.6e-13 80.1 68 60.3
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.1e-13 79.7 59 62.7
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 3.5e-13 79.0 62 62.9
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 6.0e-13 78.2 101 47.5
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 7.9e-13 77.8 72 52.8
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-11 73.9 61 60.7
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-11 73.9 61 60.7
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.1e-11 73.9 61 60.7
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 1.1e-11 73.9 61 60.7
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 1.5e-11 73.6 61 60.7
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.5e-11 72.8 72 54.2
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.6e-11 71.6 51 64.7
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.6e-10 70.1 62 56.5
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.6e-10 70.1 62 56.5
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.6e-10 70.1 62 56.5
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 2.1e-10 69.7 51 66.7
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 2.8e-10 69.3 53 64.2
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.8e-10 68.6 71 47.9
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 6.2e-10 68.2 53 62.3
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.2e-10 68.2 49 65.3
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 8.1e-10 67.8 50 64.0
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-09 67.0 53 56.6
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.4e-09 67.0 61 52.5
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 2.4e-09 66.2 58 56.9
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.4e-09 66.2 50 64.0
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 3.1e-09 65.9 66 50.0
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 4.0e-09 65.5 47 66.0
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 5.3e-09 65.1 48 66.7
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.4e-08 62.4 53 56.6
SHI11894 Sapria himalayana HOM05D000533 ORTHO05D001069 4.5e-08 62.0 49 55.1
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 7.6e-08 61.2 52 59.6
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 1.3e-07 60.5 49 61.2
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 2.4e-06 56.2 58 44.8
SHI17974 Sapria himalayana HOM05D000533 ORTHO05D001069 2.4e-06 56.2 45 55.6
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 3.2e-06 55.8 40 65.0
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 7.1e-06 54.7 40 62.5
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 7.1e-06 54.7 61 41.0
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 9.3e-06 54.3 60 40.0
SHI25676 Sapria himalayana HOM05D000533 ORTHO05D001069 9.3e-06 54.3 34 73.5


User provided reference genes

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