Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32377 Sapria himalayana HOM05D017213 ORTHO05D000002 2.6e-77 292.0 146 100.0
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 8.8e-25 117.5 76 72.4
Atru.chr7.1185 Acer truncatum HOM05D000004 ORTHO05D000002 1.4e-22 110.2 75 69.3
SHI27455 Sapria himalayana HOM05D000107 ORTHO05D000002 5.3e-22 108.2 100 52.0
SHI02379 Sapria himalayana HOM05D000004 ORTHO05D000002 4.5e-21 105.1 191 36.1
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 1.3e-20 103.6 71 66.2
SHI20498 Sapria himalayana HOM05D000002 ORTHO05D000002 1.3e-20 103.6 97 51.5
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-20 102.4 98 52.0
Atru.chr2.1912 Acer truncatum HOM05D000004 ORTHO05D000002 3.8e-20 102.1 100 48.0
SHI49874 Sapria himalayana HOM05D000004 ORTHO05D000002 6.5e-20 101.3 95 50.5
SHI25617 Sapria himalayana HOM05D000004 ORTHO05D000002 8.5e-20 100.9 98 49.0
SHI16727 Sapria himalayana HOM05D000004 ORTHO05D000002 3.6e-18 95.5 133 42.1
Actinidia17954 Actinidia chinensis HOM05D000004 ORTHO05D000002 2.3e-17 92.8 76 57.9
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 5.2e-17 91.7 88 51.1
SHI42058 Sapria himalayana HOM05D000004 ORTHO05D000002 8.8e-17 90.9 88 51.1
SHI02919 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-16 89.4 149 40.9
SHI25069 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-16 89.4 64 65.6
Phvul.004G050550 Phaseolus vulgaris HOM05D000004 ORTHO05D000002 6.3e-15 84.7 77 45.5
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 8.2e-15 84.3 188 29.3
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 8.2e-15 84.3 188 29.3
SHI15690 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-13 80.5 164 35.4
Atru.chr11.883 Acer truncatum HOM05D000004 ORTHO05D000002 5.0e-12 75.1 51 64.7
TWI77G0663 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.5e-12 74.3 74 50.0
SHI50407 Sapria himalayana HOM05D017213 ORTHO05D000002 1.5e-11 73.6 169 30.2
SHI50572 Sapria himalayana HOM05D017213 ORTHO05D000002 1.5e-11 73.6 169 30.2
PSO384G1149 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-11 71.2 154 33.8
TPR.G39702 Trifolium pratense HOM05D000004 ORTHO05D000002 2.7e-10 69.3 80 41.2
Actinidia13475 Actinidia chinensis HOM05D000004 ORTHO05D000002 1.8e-09 66.6 60 48.3
Cpa.g.sc4.133 Carica papaya HOM05D000004 ORTHO05D000002 4.0e-09 65.5 157 29.9
RcHm_v2.0_Chr6g0286171 Rosa chinensis HOM05D000004 ORTHO05D000002 2.0e-08 63.2 95 33.7
RcHm_v2.0_Chr4g0397431 Rosa chinensis HOM05D000004 ORTHO05D000002 2.6e-08 62.8 78 33.3
Atru.chr6.521 Acer truncatum HOM05D000004 ORTHO05D000002 5.7e-08 61.6 146 29.5
Atru.chr8.808 Acer truncatum HOM05D000004 ORTHO05D000002 5.7e-08 61.6 42 69.0
ECA240G2607 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-08 61.6 79 38.0
SHI52922 Sapria himalayana HOM05D000004 ORTHO05D000002 5.7e-08 61.6 176 29.0
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 7.5e-08 61.2 68 38.2
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 7.5e-08 61.2 68 38.2
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 7.5e-08 61.2 68 38.2
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-07 60.1 78 38.5
RcHm_v2.0_Chr5g0078031 Rosa chinensis HOM05D000004 ORTHO05D000002 1.7e-07 60.1 97 33.0
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-07 59.7 94 30.9
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-07 59.3 108 33.3
Atru.chr1.2388 Acer truncatum HOM05D000004 ORTHO05D000002 3.7e-07 58.9 80 35.0
ECA240G0488 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-07 58.9 83 33.7
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-07 58.9 69 39.1
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 4.8e-07 58.5 68 39.7
ECA246G2677 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.3e-07 58.2 73 38.4
Nn2g14669 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.3e-07 58.2 57 43.9
vmacro19668 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 6.3e-07 58.2 68 38.2
Manes.06G033812 Manihot esculenta HOM05D000004 ORTHO05D000002 8.2e-07 57.8 115 28.7
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 8.2e-07 57.8 95 38.9
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-06 57.4 144 22.2
Manes.17G016004 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-06 57.4 115 28.7
Manes.17G118357 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-06 57.4 115 28.7
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 57.0 85 31.8
Hma1.2p1_1212F.1_g267330 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.4e-06 57.0 60 36.7
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 1.4e-06 57.0 70 34.3
Cpa.g.sc14.28 Carica papaya HOM05D000004 ORTHO05D000002 1.8e-06 56.6 68 38.2
PSO170G1160 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-06 56.2 75 32.0
TAR351G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.4e-06 56.2 73 37.0
TAR506G0003 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.4e-06 56.2 69 40.6
Psat4g134960 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-06 55.8 95 37.9
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 3.1e-06 55.8 75 34.7
TPR.G37411 Trifolium pratense HOM05D000004 ORTHO05D000002 3.1e-06 55.8 66 37.9
Psat4g028160 Pisum sativum HOM05D000004 ORTHO05D000002 4.1e-06 55.5 95 35.8
COL.COLO4_04208 Corchorus olitorius HOM05D037185 ORTHO05D000002 5.3e-06 55.1 66 39.4
TPR.G7895 Trifolium pratense HOM05D000004 ORTHO05D000048 5.3e-06 55.1 78 38.5
TPR.G6317 Trifolium pratense HOM05D000004 ORTHO05D000002 7.0e-06 54.7 78 34.6
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.1e-06 54.3 106 23.6
Cpa.g.sc8.99 Carica papaya HOM05D000004 ORTHO05D000002 9.1e-06 54.3 91 29.7
Cpa.g.sc88.33 Carica papaya HOM05D000004 ORTHO05D000002 9.1e-06 54.3 68 38.2
ECA246G1944 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.1e-06 54.3 93 31.2
Nn1g02596 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.1e-06 54.3 74 36.5
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 9.1e-06 54.3 68 35.3


User provided reference genes

Program Settings