Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32365 Sapria himalayana HOM05D000691 ORTHO05D000378 5.7e-104 380.9 194 100.0
SHI46406 Sapria himalayana HOM05D000691 ORTHO05D000378 6.1e-50 201.4 256 48.4
SHI16232 Sapria himalayana HOM05D000691 ORTHO05D000378 6.6e-44 181.4 119 74.8
SHI06504 Sapria himalayana HOM05D000004 ORTHO05D008835 2.5e-43 179.5 143 65.7
SHI39700 Sapria himalayana HOM05D000898 ORTHO05D000378 2.1e-42 176.4 192 54.2
SHI26345 Sapria himalayana HOM05D000691 ORTHO05D000378 8.3e-39 164.5 118 68.6
SHI10619 Sapria himalayana HOM05D000691 ORTHO05D000378 1.5e-35 153.7 119 63.9
SHI27139 Sapria himalayana HOM05D000004 ORTHO05D008835 4.3e-35 152.1 99 72.7
SHI22878 Sapria himalayana HOM05D000691 ORTHO05D000378 6.2e-34 148.3 99 70.7
SHI32439 Sapria himalayana HOM05D000691 ORTHO05D000378 1.1e-33 147.5 99 73.7
SHI27097 Sapria himalayana HOM05D000691 ORTHO05D000378 1.8e-33 146.7 249 42.6
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 8.9e-33 144.4 245 39.6
SHI33916 Sapria himalayana HOM05D000004 ORTHO05D000378 2.7e-29 132.9 85 74.1
SHI33373 Sapria himalayana HOM05D000691 ORTHO05D000378 3.5e-29 132.5 81 76.5
SHI08271 Sapria himalayana HOM05D000691 ORTHO05D000378 2.5e-27 126.3 128 55.5
SHI15815 Sapria himalayana HOM05D000004 ORTHO05D000002 6.8e-25 118.2 192 42.7
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-24 115.9 119 53.8
SHI32714 Sapria himalayana HOM05D000691 ORTHO05D000378 1.3e-20 104.0 74 77.0
SHI48191 Sapria himalayana HOM05D000691 ORTHO05D000378 1.3e-20 104.0 74 81.1
SHI32716 Sapria himalayana HOM05D000691 ORTHO05D000002 2.3e-20 103.2 66 75.8
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 3.0e-20 102.8 120 47.5
CiPaw.05G045400 Carya illinoinensis HOM05D000691 ORTHO05D000378 3.9e-20 102.4 120 47.5
SHI33625 Sapria himalayana HOM05D000691 ORTHO05D000378 3.9e-20 102.4 64 70.3
SHI04755 Sapria himalayana HOM05D000004 ORTHO05D000002 6.6e-20 101.7 67 70.1
CiPaw.15G094100 Carya illinoinensis HOM05D000691 ORTHO05D000378 4.3e-19 99.0 120 46.7
SHI36120 Sapria himalayana HOM05D000691 ORTHO05D000378 2.1e-18 96.7 70 75.7
SHI07582 Sapria himalayana HOM05D000691 ORTHO05D000378 6.9e-17 91.7 59 72.9
FvH4_4g19351 Fragaria vesca HOM05D000691 ORTHO05D000378 1.2e-16 90.9 111 45.0
FvH4_5g11822 Fragaria vesca HOM05D000691 ORTHO05D000378 4.4e-16 89.0 114 46.5
FvH4_7g28231 Fragaria vesca HOM05D000004 ORTHO05D000378 4.4e-16 89.0 114 46.5
FvH4_4g34281 Fragaria vesca HOM05D000691 ORTHO05D000378 7.6e-16 88.2 114 46.5
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 9.9e-16 87.8 114 46.5
FvH4_6g19301 Fragaria vesca HOM05D000691 ORTHO05D000378 4.9e-15 85.5 111 42.3
SHI22709 Sapria himalayana HOM05D000691 ORTHO05D000378 2.4e-14 83.2 79 60.8
SHI20658 Sapria himalayana HOM05D000691 ORTHO05D000378 9.3e-14 81.3 56 75.0
SHI17925 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-13 80.1 58 74.1
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 2.7e-13 79.7 112 42.0
SHI10892 Sapria himalayana HOM05D000691 ORTHO05D000378 2.7e-13 79.7 74 60.8
SHI27515 Sapria himalayana HOM05D000004 ORTHO05D000378 3.5e-13 79.3 50 82.0
SHI21476 Sapria himalayana HOM05D000004 ORTHO05D008835 3.0e-12 76.3 52 76.9
SHI06205 Sapria himalayana HOM05D005323 ORTHO05D000023 3.9e-12 75.9 61 72.1
SHI43947 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-12 75.9 51 82.4
Sp1g32920 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.6e-12 75.1 113 41.6
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-11 74.3 121 38.8
SHI22547 Sapria himalayana HOM05D000691 ORTHO05D367482 1.5e-11 73.9 69 59.4
SHI00389 Sapria himalayana HOM05D000691 ORTHO05D000378 1.9e-11 73.6 51 78.4
Sp6g09660 Schrenkiella parvula HOM05D000675 ORTHO05D000378 1.9e-11 73.6 117 38.5
Oeu027794.2 Olea europaea HOM05D000691 ORTHO05D000378 2.5e-11 73.2 115 38.3
Sp7g05810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.3e-11 72.8 113 39.8
EL10Ac3g05722 Beta vulgaris HOM05D000691 ORTHO05D000378 7.3e-11 71.6 119 37.8
EL10Ac6g14162 Beta vulgaris HOM05D000691 ORTHO05D000378 9.6e-11 71.2 119 37.8
EL10Ac7g16302 Beta vulgaris HOM05D000691 ORTHO05D000378 9.6e-11 71.2 119 37.8
Oeu032737.1 Olea europaea HOM05D000691 ORTHO05D000378 1.3e-10 70.9 112 38.4
EL10Ac8g18762 Beta vulgaris HOM05D000691 ORTHO05D000378 1.6e-10 70.5 119 37.8
FvH4_3g10531 Fragaria vesca HOM05D000691 ORTHO05D000378 4.8e-10 68.9 122 36.9
AUR62035881 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-09 67.4 110 35.5
FvH4_c7g00010 Fragaria vesca HOM05D000691 ORTHO05D000378 1.4e-09 67.4 122 36.1
FvH4_3g33536 Fragaria vesca HOM05D000691 ORTHO05D000378 1.8e-09 67.0 122 36.1
SHI29938 Sapria himalayana HOM05D000004 ORTHO05D008835 1.8e-09 67.0 60 58.3
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 2.4e-09 66.6 135 31.1
FvH4_2g00261 Fragaria vesca HOM05D000691 ORTHO05D000378 3.1e-09 66.2 122 36.1
FvH4_5g31701 Fragaria vesca HOM05D000691 ORTHO05D000378 3.1e-09 66.2 122 35.2
Hma1.2p1_0370F.1_g137540 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 3.1e-09 66.2 170 33.5
SHI06326 Sapria himalayana HOM05D000691 ORTHO05D000378 3.1e-09 66.2 42 69.0
ClCG11G007310 Citrullus lanatus HOM05D000691 ORTHO05D000378 4.0e-09 65.9 121 34.7
FvH4_1g23713 Fragaria vesca HOM05D000691 ORTHO05D000378 4.0e-09 65.9 122 36.1
Gorai.012G165300 Gossypium raimondii HOM05D000691 ORTHO05D000378 4.0e-09 65.9 111 37.8
SHI07388 Sapria himalayana HOM05D000691 ORTHO05D000378 5.3e-09 65.5 159 32.7
SHI00609 Sapria himalayana HOM05D000004 ORTHO05D000378 6.9e-09 65.1 63 61.9
BolC5t32558H Brassica oleracea HOM05D000691 ORTHO05D000378 9.0e-09 64.7 110 36.4
SHI20663 Sapria himalayana HOM05D000691 ORTHO05D000378 9.0e-09 64.7 41 68.3
Sopen05g015410 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-08 64.3 122 32.8
AUR62014878 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.5e-08 63.9 114 35.1
AUR62032884 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.5e-08 63.9 113 36.3
AUR62038563 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.5e-08 63.9 114 35.1
AUR62030164 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.0e-08 63.5 114 35.1
AUR62031817 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.0e-08 63.5 109 33.9
Hma1.2p1_2467F.1_g322660 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 2.0e-08 63.5 170 30.6
AUR62029957 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.6e-08 63.2 149 30.9
AUR62029958 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.6e-08 63.2 149 30.9
Ah.06g186800 Amaranthus hybridus HOM05D000691 ORTHO05D000378 3.4e-08 62.8 133 32.3
Sopen01g023070 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-08 62.8 122 32.0
AL3G47720 Arabidopsis lyrata HOM05D000691 ORTHO05D000378 4.5e-08 62.4 178 30.3
HanXRQChr05g0133501 Helianthus annuus HOM05D000691 ORTHO05D000378 4.5e-08 62.4 114 36.8
AUR62033100 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.8e-08 62.0 194 30.9
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.8e-08 62.0 107 35.5
Oeu060366.1 Olea europaea HOM05D000691 ORTHO05D000378 5.8e-08 62.0 128 34.4
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 5.8e-08 62.0 122 32.0
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 7.6e-08 61.6 135 31.1
AUR62022775 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.6e-08 61.6 187 30.5
SHI26746 Sapria himalayana HOM05D000004 ORTHO05D000378 7.6e-08 61.6 43 72.1
Oeu012057.1 Olea europaea HOM05D000691 ORTHO05D000378 9.9e-08 61.2 129 34.9
AUR62019661 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.3e-07 60.8 113 37.2
AUR62022985 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.3e-07 60.8 116 36.2
Manes.S027416 Manihot esculenta HOM05D000691 ORTHO05D000378 1.3e-07 60.8 119 37.8
THA.LOC109117174 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.3e-07 60.8 105 36.2
THA.LOC104807978 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.7e-07 60.5 115 30.4
Manes.S026816 Manihot esculenta HOM05D000691 ORTHO05D000922 2.2e-07 60.1 119 37.8
SHI06505 Sapria himalayana HOM05D000691 ORTHO05D000378 2.2e-07 60.1 74 56.8
Ah.14g080140 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.9e-07 59.7 117 36.8
CSS0004285 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-07 59.7 129 28.7
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-07 59.7 131 28.2
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-07 59.7 131 28.2
AUR62029551 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.9e-07 59.7 194 30.4
Hund01785 Selenicereus undatus HOM05D000691 ORTHO05D000378 2.9e-07 59.7 111 36.9
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-07 59.3 133 30.1
AUR62034760 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.8e-07 59.3 113 37.2
AUR62036876 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.8e-07 59.3 113 37.2
Manes.S041516 Manihot esculenta HOM05D033829 ORTHO05D000378 3.8e-07 59.3 116 37.1
AUR62042209 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.9e-07 58.9 138 31.2
SpUn0451_0010 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.9e-07 58.9 115 33.0
Hund04739 Selenicereus undatus HOM05D000691 ORTHO05D000378 4.9e-07 58.9 111 35.1
AUR62017430 Chenopodium quinoa HOM05D000691 ORTHO05D000378 8.4e-07 58.2 111 36.9
AUR62007502 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-06 57.8 195 27.7
AUR62042593 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-06 57.8 113 36.3
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.8 122 31.1
Sopen02g010310 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.8 124 32.3
AUR62043025 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-06 57.4 113 36.3
AUR62043091 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-06 57.4 113 36.3
SHI33318 Sapria himalayana HOM05D000691 ORTHO05D365308 1.9e-06 57.0 57 64.9
Hund17998 Selenicereus undatus HOM05D000691 ORTHO05D000378 1.9e-06 57.0 113 33.6
AUR62041609 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.4e-06 56.6 119 33.6
MELO3C010395.2 Cucumis melo HOM05D000691 ORTHO05D000378 2.4e-06 56.6 123 30.9
SHI04829 Sapria himalayana HOM05D000691 ORTHO05D364877 2.4e-06 56.6 87 44.8
SHI25401 Sapria himalayana HOM05D000004 ORTHO05D000378 2.4e-06 56.6 98 42.9
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 56.2 164 29.3
AUR62023603 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.2e-06 55.8 113 36.3
AUR62026905 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.2e-06 55.8 193 29.0
AUR62038947 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.2e-06 55.8 109 35.8
FvH4_3g36090 Fragaria vesca HOM05D014995 ORTHO05D035483 4.2e-06 55.8 120 28.3
Sopen12g027950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-06 55.8 110 29.1
Ah.06g186750 Amaranthus hybridus HOM05D000691 ORTHO05D000378 5.4e-06 55.5 178 28.1
Ah.09g229600 Amaranthus hybridus HOM05D000691 ORTHO05D000378 5.4e-06 55.5 117 34.2
AUR62010488 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.4e-06 55.5 194 30.4
AUR62033757 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.1e-06 55.1 112 33.0
SHI04691 Sapria himalayana HOM05D000691 ORTHO05D000378 7.1e-06 55.1 45 68.9
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 110 30.9
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 55.1 117 29.1
THA.LOC104809135 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.1e-06 55.1 107 31.8
AUR62018234 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.3e-06 54.7 194 30.4
AUR62032126 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.3e-06 54.7 194 30.4
AUR62042120 Chenopodium quinoa HOM05D008390 ORTHO05D000378 9.3e-06 54.7 109 29.4
CsaV3_4G014860 Cucumis sativus L. HOM05D000691 ORTHO05D000378 9.3e-06 54.7 107 30.8
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-06 54.7 164 28.0


User provided reference genes

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