Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32247 Sapria himalayana HOM05D001249 ORTHO05D003440 4.4e-33 144.1 74 100.0
SHI50201 Sapria himalayana HOM05D001249 ORTHO05D003440 2.2e-24 115.2 80 78.8
SHI22067 Sapria himalayana HOM05D001249 ORTHO05D003440 1.4e-18 95.9 58 82.8
SHI01299 Sapria himalayana HOM05D001249 ORTHO05D003440 2.4e-18 95.1 53 88.7
SHI34456 Sapria himalayana HOM05D001249 ORTHO05D003440 3.1e-18 94.7 53 88.7
SHI53105 Sapria himalayana HOM05D001249 ORTHO05D003440 2.0e-17 92.0 58 81.0
SHI13210 Sapria himalayana HOM05D001249 ORTHO05D003440 4.9e-16 87.4 53 81.1
SHI51788 Sapria himalayana HOM05D001249 ORTHO05D003440 6.4e-16 87.0 60 73.3
SHI22213 Sapria himalayana HOM05D001249 ORTHO05D003440 8.4e-16 86.7 64 76.6
SHI50079 Sapria himalayana HOM05D001249 ORTHO05D003440 1.1e-15 86.3 60 71.7
SHI33111 Sapria himalayana HOM05D001249 ORTHO05D003440 3.2e-15 84.7 52 80.8
Eucgr.H00245 Eucalyptus grandis HOM05D001249 ORTHO05D003440 7.9e-14 80.1 52 75.0
CiPaw.02G125500 Carya illinoinensis HOM05D001249 ORTHO05D003440 1.0e-13 79.7 49 77.6
CANSAT56G2692 Cannabis sativa HOM05D001249 ORTHO05D003440 1.3e-13 79.3 49 75.5
Nn1g09415 Nelumbo nucifera HOM05D001249 ORTHO05D003440 1.3e-13 79.3 49 75.5
vmacro00731 Vaccinium macrocarpon HOM05D001249 ORTHO05D003440 1.3e-13 79.3 52 73.1
vmacro03772 Vaccinium macrocarpon HOM05D001249 ORTHO05D003440 1.3e-13 79.3 52 73.1
Atru.chr3.1961 Acer truncatum HOM05D001249 ORTHO05D003440 1.8e-13 79.0 49 75.5
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 1.8e-13 79.0 49 73.5
Cfa008531 Carpinus fangiana HOM05D001249 ORTHO05D003440 1.8e-13 79.0 49 75.5
Aqoxy6G00001 Aquilegia oxysepala HOM05D001249 ORTHO05D003440 2.3e-13 78.6 49 73.5
ClCG06G010080 Citrullus lanatus HOM05D001249 ORTHO05D003440 2.3e-13 78.6 52 67.3
MELO3C020416.2 Cucumis melo HOM05D001249 ORTHO05D003440 2.3e-13 78.6 49 71.4
CsaV3_2G011930 Cucumis sativus L. HOM05D001249 ORTHO05D003440 2.3e-13 78.6 49 71.4
Potri.007G146300 Populus trichocarpa HOM05D001249 ORTHO05D003440 2.3e-13 78.6 49 73.5
Sed0022992 Sechium edule HOM05D001249 ORTHO05D003440 3.0e-13 78.2 49 71.4
Lju470C1T4 Lonicera japonica HOM05D001249 ORTHO05D003440 3.9e-13 77.8 49 73.5
MD02G1000600 Malus domestica HOM05D001249 ORTHO05D003440 3.9e-13 77.8 49 71.4
MD15G1142200 Malus domestica HOM05D001249 ORTHO05D003440 3.9e-13 77.8 49 71.4
GSVIVG01038264001 Vitis vinifera HOM05D001249 ORTHO05D003440 3.9e-13 77.8 49 71.4
COL.COLO4_32523 Corchorus olitorius HOM05D001249 ORTHO05D003440 5.1e-13 77.4 49 73.5
Dinv24741 Davidia involucrata HOM05D001249 ORTHO05D003440 5.1e-13 77.4 49 71.4
Lalb_Chr10g0106081 Lupinus albus HOM05D001249 ORTHO05D003440 5.1e-13 77.4 52 71.2
Prupe.7G271000 Prunus persica HOM05D001249 ORTHO05D003440 5.1e-13 77.4 52 69.2
QL10p064706 Quercus lobata HOM05D001249 ORTHO05D003440 5.1e-13 77.4 49 73.5
QL10p064865 Quercus lobata HOM05D001249 ORTHO05D003440 5.1e-13 77.4 49 73.5
QL10p064899 Quercus lobata HOM05D001249 ORTHO05D003440 5.1e-13 77.4 49 73.5
QL10p065831 Quercus lobata HOM05D001249 ORTHO05D003440 5.1e-13 77.4 49 73.5
VMungo0647G1653 Vigna mungo HOM05D001249 ORTHO05D003440 5.1e-13 77.4 52 71.2
MSTRG.8086 Avicennia marina HOM05D001249 ORTHO05D003440 6.7e-13 77.0 49 73.5
Ciclev10020871m.g Citrus clementina HOM05D001249 ORTHO05D003440 6.7e-13 77.0 49 73.5
Glyma.02G277300 Glycine max HOM05D001249 ORTHO05D003440 6.7e-13 77.0 52 69.2
Glyma.14G037300 Glycine max HOM05D001249 ORTHO05D003440 6.7e-13 77.0 52 69.2
Lalb_Chr15g0080151 Lupinus albus HOM05D001249 ORTHO05D003440 6.7e-13 77.0 49 73.5
PGR142G4250 Punica granatum HOM05D001249 ORTHO05D003440 6.7e-13 77.0 49 71.4
SGA_v2.0_scaffold37G14908 Striga asiatica HOM05D001249 ORTHO05D003440 6.7e-13 77.0 49 73.5
arahy.Tifrunner.gnm1.ann1.L9LT8B Arachis hypogaea HOM05D001249 ORTHO05D003440 8.7e-13 76.6 52 71.2
Cc03_g16190 Coffea canephora HOM05D001249 ORTHO05D003440 8.7e-13 76.6 52 67.3
Manes.05G208200 Manihot esculenta HOM05D001249 ORTHO05D003440 8.7e-13 76.6 49 71.4
SHI51633 Sapria himalayana HOM05D001249 ORTHO05D003440 8.7e-13 76.6 67 64.2
TWI63G1312 Tripterygium wilfordii HOM05D001249 ORTHO05D003440 8.7e-13 76.6 49 73.5
arahy.Tifrunner.gnm1.ann1.R434E2 Arachis hypogaea HOM05D001249 ORTHO05D003440 1.1e-12 76.3 52 69.2
CSS0028444 Camellia sinensis var. sinensis HOM05D001249 ORTHO05D003440 1.1e-12 76.3 49 71.4
Ca_26658_v3 Cicer arietinum L. HOM05D001249 ORTHO05D003440 1.1e-12 76.3 49 65.3
Duzib093G0930 Durio zibethinus HOM05D001249 ORTHO05D003440 1.1e-12 76.3 49 71.4
Gohir.A03G218500 Gossypium hirsutum HOM05D001249 ORTHO05D003440 1.1e-12 76.3 49 71.4
HanXRQChr01g0017591 Helianthus annuus HOM05D001249 ORTHO05D003440 1.1e-12 76.3 49 71.4
Medtr3g045190 Medicago truncatula HOM05D001249 ORTHO05D003440 1.1e-12 76.3 49 67.3
Sabra07G0115100 Salix brachista HOM05D001249 ORTHO05D003440 1.1e-12 76.3 49 73.5
Ah.07g203310 Amaranthus hybridus HOM05D001249 ORTHO05D003440 1.5e-12 75.9 49 71.4
FvH4_1g00090 Fragaria vesca HOM05D001249 ORTHO05D003440 1.5e-12 75.9 52 67.3
FAN26G0381 Fragaria x ananassa HOM05D001249 ORTHO05D003440 1.5e-12 75.9 52 67.3
FAN28G2707 Fragaria x ananassa HOM05D001249 ORTHO05D003440 1.5e-12 75.9 52 67.3
MBI07_g27882_MAGBIO Magnolia biondii HOM05D001249 ORTHO05D003440 1.5e-12 75.9 49 71.4
RcHm_v2.0_Chr2g0084381 Rosa chinensis HOM05D001249 ORTHO05D003440 1.5e-12 75.9 52 67.3
TPR.G11914 Trifolium pratense HOM05D001249 ORTHO05D003440 1.5e-12 75.9 49 67.3
CDE04G1507 Ceratophyllum demersum HOM05D001249 ORTHO05D003440 1.9e-12 75.5 48 68.8
ECA248G2519 Erigeron canadensis HOM05D001249 ORTHO05D003440 1.9e-12 75.5 49 69.4
Glyma.20G044800 Glycine max HOM05D001249 ORTHO05D003440 1.9e-12 75.5 49 69.4
LjContig00564g0000582 Lotus japonicus HOM05D001249 ORTHO05D003440 1.9e-12 75.5 52 69.2
Lj6g0018713 Lotus japonicus HOM05D001249 ORTHO05D003440 2.5e-12 75.1 49 67.3
Nitab4.5_0003681g0020 Nicotiana tabacum HOM05D001249 ORTHO05D003440 2.5e-12 75.1 49 73.5
Peaxi162Scf00057g01912 Petunia axillaris HOM05D001249 ORTHO05D003440 2.5e-12 75.1 49 71.4
Peaxi162Scf01205g00175 Petunia axillaris HOM05D001249 ORTHO05D003440 2.5e-12 75.1 52 69.2
Peaxi162Scf63976g00001 Petunia axillaris HOM05D001249 ORTHO05D003440 2.5e-12 75.1 49 71.4
Phvul.006G018100 Phaseolus vulgaris HOM05D001249 ORTHO05D003440 2.5e-12 75.1 49 67.3
PGSC0003DMG400013715 Solanum tuberosum HOM05D001249 ORTHO05D003440 2.5e-12 75.1 49 71.4
CAN.G68.1 Capsicum annuum HOM05D001249 ORTHO05D003440 3.3e-12 74.7 49 71.4
Lalb_Chr04g0249331 Lupinus albus HOM05D001249 ORTHO05D003440 3.3e-12 74.7 49 69.4
Nitab4.5_0005148g0040 Nicotiana tabacum HOM05D001249 ORTHO05D003440 3.3e-12 74.7 49 71.4
Phvul.008G203600 Phaseolus vulgaris HOM05D001249 ORTHO05D003440 3.3e-12 74.7 52 67.3
Cpa.g.sc9.242 Carica papaya HOM05D001249 ORTHO05D003440 4.3e-12 74.3 49 71.4
SGA_v2.0_scaffold12G06226 Striga asiatica HOM05D001249 ORTHO05D003440 4.3e-12 74.3 49 69.4
VMungo0540G2213 Vigna mungo HOM05D001249 ORTHO05D003440 4.3e-12 74.3 52 63.5
Gohir.A01G231800 Gossypium hirsutum HOM05D001249 ORTHO05D003440 5.6e-12 73.9 49 69.4
Gohir.A07G233300 Gossypium hirsutum HOM05D001249 ORTHO05D003440 5.6e-12 73.9 49 69.4
Gohir.D01G221900 Gossypium hirsutum HOM05D001249 ORTHO05D003440 5.6e-12 73.9 49 69.4
Gorai.002G268600 Gossypium raimondii HOM05D001249 ORTHO05D003440 5.6e-12 73.9 49 69.4
Lju124C5T8 Lonicera japonica HOM05D001249 ORTHO05D003440 5.6e-12 73.9 49 67.3
SHI24409 Sapria himalayana HOM05D001249 ORTHO05D003440 5.6e-12 73.9 43 81.4
THA.LOC104804361 Tarenaya hassleriana HOM05D001249 ORTHO05D003440 5.6e-12 73.9 52 67.3
TAR362G1111 Trochodendron aralioides HOM05D001249 ORTHO05D003440 5.6e-12 73.9 49 69.4
HPP92_001207 Vanilla planifolia HOM05D001249 ORTHO05D003440 5.6e-12 73.9 49 69.4
AUR62002497 Chenopodium quinoa HOM05D001249 ORTHO05D003440 7.4e-12 73.6 52 63.5
Lsat_1_v5_gn_1_82580 Lactuca sativa HOM05D001249 ORTHO05D003440 7.4e-12 73.6 49 65.3
ATR0225G022 Amborella trichopoda HOM05D001249 ORTHO05D003440 9.6e-12 73.2 52 65.4
arahy.Tifrunner.gnm1.ann1.4U54KW Arachis hypogaea HOM05D001249 ORTHO05D003440 9.6e-12 73.2 52 65.4
arahy.Tifrunner.gnm1.ann1.GD18YF Arachis hypogaea HOM05D001249 ORTHO05D003440 9.6e-12 73.2 52 65.4
EL10Ac3g06181 Beta vulgaris HOM05D001249 ORTHO05D003440 9.6e-12 73.2 49 65.3
AUR62023689 Chenopodium quinoa HOM05D001249 ORTHO05D003440 9.6e-12 73.2 52 61.5
DCAR_027489 Daucus carota HOM05D001249 ORTHO05D003440 9.6e-12 73.2 52 63.5
Nitab4.5_0000348g0040 Nicotiana tabacum HOM05D001249 ORTHO05D003440 9.6e-12 73.2 49 71.4
SHI23769 Sapria himalayana HOM05D001249 ORTHO05D003440 9.6e-12 73.2 46 80.4
Sc25g0002220 Simmondsia chinensis HOM05D001249 ORTHO05D003440 9.6e-12 73.2 49 67.3
DCAR_023793 Daucus carota HOM05D001249 ORTHO05D003440 1.3e-11 72.8 49 67.3
Oeu014978.1 Olea europaea HOM05D001249 ORTHO05D003440 1.3e-11 72.8 49 69.4
Solyc08g015690.4 Solanum lycopersicum HOM05D001249 ORTHO05D003440 1.3e-11 72.8 49 69.4
Sopen08g005800 Solanum pennellii HOM05D001249 ORTHO05D003440 1.3e-11 72.8 49 69.4
Thecc.05G000700 Theobroma cacao HOM05D001249 ORTHO05D003440 1.3e-11 72.8 49 69.4
unitig_8.g4743 Utricularia gibba HOM05D004739 ORTHO05D003440 1.3e-11 72.8 49 67.3
Os03g0843300 Oryza sativa ssp. japonica HOM05D001249 ORTHO05D003440 1.6e-11 72.4 64 53.1
CiPaw.01G202900 Carya illinoinensis HOM05D001249 ORTHO05D003440 2.1e-11 72.0 49 69.4
TPR.G16415 Trifolium pratense HOM05D001249 ORTHO05D003440 2.1e-11 72.0 52 63.5
Migut.G00799 Erythranthe guttata HOM05D001249 ORTHO05D003440 3.7e-11 71.2 49 67.3
THA.LOC104802350 Tarenaya hassleriana HOM05D001249 ORTHO05D003440 3.7e-11 71.2 49 67.3
Ca_06180_v3 Cicer arietinum L. HOM05D001249 ORTHO05D003440 4.8e-11 70.9 52 63.5
Medtr5g088850 Medicago truncatula HOM05D001249 ORTHO05D003440 4.8e-11 70.9 52 61.5
CDE09G1295 Ceratophyllum demersum HOM05D001249 ORTHO05D003440 6.2e-11 70.5 49 63.3
PSO170G3486 Papaver somniferum HOM05D001249 ORTHO05D003440 8.1e-11 70.1 49 63.3
PSO384G3429 Papaver somniferum HOM05D001249 ORTHO05D003440 8.1e-11 70.1 49 63.3
ATR0743G044 Amborella trichopoda HOM05D001249 ORTHO05D003440 1.1e-10 69.7 49 63.3
Carub.0004s2661 Capsella rubella HOM05D001249 ORTHO05D003440 1.4e-10 69.3 52 59.6
CARHR139220 Cardamine hirsuta HOM05D001249 ORTHO05D003440 1.4e-10 69.3 52 59.6
Sopen12g008300 Solanum pennellii HOM05D001249 ORTHO05D003440 1.4e-10 69.3 49 67.3
AL4G42930 Arabidopsis lyrata HOM05D001249 ORTHO05D003440 1.8e-10 68.9 52 59.6
Migut.N03015 Erythranthe guttata HOM05D001249 ORTHO05D003440 1.8e-10 68.9 52 57.7
SEGI_02724 Sequoiadendron giganteum HOM05D001249 ORTHO05D003440 1.8e-10 68.9 49 59.2
Zm00001eb064120 Zea mays HOM05D001249 ORTHO05D003440 1.8e-10 68.9 64 50.0
ECA233G0816 Erigeron canadensis HOM05D001249 ORTHO05D003440 2.4e-10 68.6 49 57.1
AT2G44060 Arabidopsis thaliana HOM05D001249 ORTHO05D003440 3.1e-10 68.2 52 57.7
BcaC01g05189 Brassica carinata HOM05D001249 ORTHO05D003440 3.1e-10 68.2 52 59.6
A03p24660 Brassica napus HOM05D001249 ORTHO05D003440 3.1e-10 68.2 52 59.6
C03p29400 Brassica napus HOM05D001249 ORTHO05D003440 3.1e-10 68.2 52 59.6
BolC3t15287H Brassica oleracea HOM05D001249 ORTHO05D003440 3.1e-10 68.2 52 59.6
BraA03t11672Z Brassica rapa HOM05D001249 ORTHO05D003440 3.1e-10 68.2 52 59.6
Aqoxy6G00880 Aquilegia oxysepala HOM05D001249 ORTHO05D003440 4.0e-10 67.8 56 53.6
BcaB06g29354 Brassica carinata HOM05D001249 ORTHO05D003440 4.0e-10 67.8 52 61.5
SHI40070 Sapria himalayana HOM05D001249 ORTHO05D003440 4.0e-10 67.8 53 66.0
SHI40100 Sapria himalayana HOM05D001249 ORTHO05D003440 4.0e-10 67.8 53 66.0
Sp4g26140 Schrenkiella parvula HOM05D001249 ORTHO05D003440 5.3e-10 67.4 52 57.7
PGSC0003DMG400006460 Solanum tuberosum HOM05D001249 ORTHO05D003440 5.3e-10 67.4 49 65.3
TAR376G0188 Trochodendron aralioides HOM05D001249 ORTHO05D003440 5.3e-10 67.4 56 53.6
BcaB06g29513 Brassica carinata HOM05D001249 ORTHO05D003440 6.9e-10 67.0 52 59.6
BcaC02g07138 Brassica carinata HOM05D001249 ORTHO05D003440 6.9e-10 67.0 52 59.6
C04p70870 Brassica napus HOM05D001249 ORTHO05D003440 6.9e-10 67.0 52 59.6
BolC4t28588H Brassica oleracea HOM05D001249 ORTHO05D003440 6.9e-10 67.0 52 59.6
Thhalv10001537m.g Eutrema salsugineum HOM05D001249 ORTHO05D003440 6.9e-10 67.0 52 55.8
Psat2g021400 Pisum sativum HOM05D001249 ORTHO05D003440 6.9e-10 67.0 52 57.7
SalBow6G0898 Salvia bowleyana HOM05D001249 ORTHO05D003440 6.9e-10 67.0 49 61.2
Lju41A14T32 Lonicera japonica HOM05D001249 ORTHO05D003440 9.0e-10 66.6 49 61.2
Sed0007404 Sechium edule HOM05D001249 ORTHO05D003440 9.0e-10 66.6 49 59.2
Aa31LG1G25730 Aethionema arabicum HOM05D001249 ORTHO05D003440 1.2e-09 66.2 52 55.8
BcaB01g03333 Brassica carinata HOM05D001249 ORTHO05D003440 1.2e-09 66.2 52 57.7
PSO675G8641 Papaver somniferum HOM05D001249 ORTHO05D003440 1.2e-09 66.2 66 48.5
PSO541G5475 Papaver somniferum HOM05D001249 ORTHO05D003440 1.5e-09 65.9 49 57.1
A04p33180 Brassica napus HOM05D001249 ORTHO05D003440 2.0e-09 65.5 52 57.7
BraA04t18777Z Brassica rapa HOM05D001249 ORTHO05D003440 2.0e-09 65.5 52 57.7
CDE02G4753 Ceratophyllum demersum HOM05D001249 ORTHO05D003440 2.0e-09 65.5 49 59.2
Hund12304 Selenicereus undatus HOM05D001249 ORTHO05D003440 2.0e-09 65.5 52 51.9
MBI16_g27589_MAGBIO Magnolia biondii HOM05D001249 ORTHO05D003440 5.8e-09 63.9 56 53.6
CDE07G0014 Ceratophyllum demersum HOM05D001249 ORTHO05D003440 1.7e-08 62.4 49 53.1
Nn5g29337 Nelumbo nucifera HOM05D001249 ORTHO05D003440 1.7e-08 62.4 63 46.0
Manes.01G009601 Manihot esculenta HOM05D001249 ORTHO05D003440 2.9e-08 61.6 49 57.1
SHI15069 Sapria himalayana HOM05D001249 ORTHO05D003440 3.8e-08 61.2 48 72.9
SMO367G0480 Selaginella moellendorffii HOM05D001249 ORTHO05D003440 1.4e-07 59.3 49 51.0
CAN.G207.8 Capsicum annuum HOM05D001249 ORTHO05D003440 3.2e-07 58.2 49 57.1
Pp3c24_14840 Physcomitrium patens HOM05D001249 ORTHO05D003440 1.6e-06 55.8 49 51.0
Mapoly0002s0220 Marchantia polymorpha HOM05D001249 ORTHO05D003440 2.7e-06 55.1 56 44.6
AagrBONN_evm.TU.Sc2ySwM_117.2490 Anthoceros agrestis HOM05D001249 ORTHO05D003440 3.5e-06 54.7 49 51.0
BcaB01g03343 Brassica carinata HOM05D001249 ORTHO05D003440 4.6e-06 54.3 52 51.9
Gohir.A08G253400 Gossypium hirsutum HOM05D001249 ORTHO05D003440 4.6e-06 54.3 51 54.9
MBI10_g03654_MAGBIO Magnolia biondii HOM05D001249 ORTHO05D003440 6.0e-06 53.9 47 53.2
Os07g0272300 Oryza sativa ssp. japonica HOM05D001249 ORTHO05D003440 7.9e-06 53.5 40 52.5


User provided reference genes

Program Settings