Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 1.5e-189 666.0 334 100.0
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 2.0e-48 197.2 353 39.1
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 2.9e-47 193.4 344 41.6
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 4.9e-47 192.6 342 40.9
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 5.4e-46 189.1 341 41.3
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 7.1e-46 188.7 337 38.6
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 7.1e-46 188.7 360 39.7
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 4.6e-45 186.0 348 39.7
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 3.9e-44 183.0 352 38.9
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.1e-43 181.4 349 38.7
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 3.3e-43 179.9 353 37.1
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 9.6e-43 178.3 338 39.1
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 9.6e-43 178.3 336 40.2
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.3e-42 177.9 358 38.5
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 2.1e-42 177.2 299 42.5
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 2.8e-42 176.8 335 40.6
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.1e-41 174.9 351 38.2
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 1.4e-41 174.5 343 37.9
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 3.1e-41 173.3 338 38.8
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 4.0e-41 172.9 365 37.5
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 5.3e-41 172.6 354 38.7
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 1.5e-40 171.0 329 39.5
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 2.0e-40 170.6 370 37.3
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 2.0e-40 170.6 339 38.1
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 4.5e-40 169.5 338 37.9
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 2.9e-39 166.8 341 37.2
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 4.9e-39 166.0 331 37.8
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 6.4e-39 165.6 326 38.7
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 1.1e-38 164.9 335 37.6
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 1.1e-38 164.9 333 38.7
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 1.4e-38 164.5 352 37.5
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.4e-38 164.5 352 37.5
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 3.2e-38 163.3 342 40.4
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 3.2e-38 163.3 347 39.2
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 5.4e-38 162.5 353 38.5
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 1.2e-37 161.4 354 35.6
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 1.2e-37 161.4 351 37.0
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 6.0e-37 159.1 352 35.8
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 6.0e-37 159.1 339 38.1
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 6.0e-37 159.1 328 36.9
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 7.9e-37 158.7 349 36.7
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.0e-36 158.3 342 39.2
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 1.3e-36 157.9 359 37.6
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.8e-36 157.5 348 35.9
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 2.3e-36 157.1 354 35.0
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 2.3e-36 157.1 326 38.7
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 3.0e-36 156.8 340 36.8
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 3.0e-36 156.8 323 37.8
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 5.1e-36 156.0 340 37.1
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 5.1e-36 156.0 343 37.0
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 6.7e-36 155.6 342 35.1
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 6.7e-36 155.6 350 37.7
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.1e-35 154.8 313 39.0
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 1.5e-35 154.5 346 37.9
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.5e-35 154.5 317 39.1
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 3.3e-35 153.3 355 36.1
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 3.3e-35 153.3 345 35.7
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.6e-35 152.5 289 39.4
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 5.6e-35 152.5 307 40.1
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 5.6e-35 152.5 349 35.0
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 9.6e-35 151.8 344 33.4
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 9.6e-35 151.8 350 36.0
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.3e-34 151.4 368 36.1
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.8e-34 150.2 331 37.5
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.8e-34 150.2 326 37.7
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 3.6e-34 149.8 312 37.2
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 4.8e-34 149.4 290 40.3
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.1e-33 148.3 355 35.8
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.4e-33 147.9 331 37.5
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.4e-33 147.9 335 34.9
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 5.3e-33 146.0 326 34.7
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.5e-32 144.4 289 38.4
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 1.5e-32 144.4 356 35.7
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 2.0e-32 144.1 326 39.3
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.6e-32 143.7 350 34.0
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.4e-32 143.3 329 35.9
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 3.4e-32 143.3 330 37.9
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 3.4e-32 143.3 350 36.0
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 7.6e-32 142.1 344 37.2
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 9.9e-32 141.7 353 34.3
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 1.3e-31 141.4 372 34.9
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.3e-31 141.4 339 36.0
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 1.7e-31 141.0 326 36.5
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 2.2e-31 140.6 328 34.5
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 2.9e-31 140.2 366 35.2
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.9e-31 140.2 326 35.3
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 3.8e-31 139.8 314 39.2
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.8e-31 139.8 325 36.9
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 8.4e-31 138.7 365 34.2
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.4e-30 137.1 341 36.4
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 4.2e-30 136.3 320 36.2
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 4.2e-30 136.3 335 36.7
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 4.2e-30 136.3 337 34.1
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 5.5e-30 136.0 347 35.7
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 9.3e-30 135.2 315 37.1
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 1.6e-29 134.4 323 36.2
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 2.7e-29 133.7 341 35.2
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 3.5e-29 133.3 317 32.2
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 3.5e-29 133.3 343 35.3
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 7.9e-29 132.1 344 35.2
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.3e-28 131.3 319 35.1
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 2.3e-28 130.6 346 33.8
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.9e-28 129.8 291 35.7
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 6.7e-28 129.0 346 34.7
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.1e-27 128.3 316 36.4
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.1e-27 128.3 327 33.6
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 1.1e-27 128.3 323 36.2
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.5e-27 127.9 316 36.7
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 2.5e-27 127.1 336 33.3
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 3.3e-27 126.7 300 35.0
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 5.6e-27 125.9 336 31.8
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 9.6e-27 125.2 325 33.2
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 1.3e-26 124.8 344 32.0
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 1.6e-26 124.4 321 34.6
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 4.8e-26 122.9 280 35.4
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 6.2e-26 122.5 329 35.0
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 1.4e-25 121.3 333 33.3
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 1.4e-25 121.3 346 33.2
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 1.4e-25 121.3 361 33.8
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 1.8e-25 120.9 307 36.2
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 2.4e-25 120.6 331 34.4
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 3.1e-25 120.2 354 31.1
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 5.3e-25 119.4 320 34.4
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 5.3e-25 119.4 329 33.4
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 6.9e-25 119.0 339 33.6
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 2.6e-24 117.1 341 31.7
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 3.4e-24 116.7 278 35.3
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 1.0e-23 115.2 271 34.3
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.7e-23 114.4 306 31.7
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 1.7e-23 114.4 210 41.9
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 4.9e-23 112.8 155 46.5
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.4e-22 111.3 348 29.6
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.4e-22 111.3 348 29.6
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 4.2e-22 109.8 282 34.8
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 5.5e-22 109.4 326 34.4
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 1.6e-21 107.8 329 31.3
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 4.6e-21 106.3 321 31.5
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 6.0e-21 105.9 327 31.2
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 6.0e-21 105.9 278 36.3
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 3.0e-20 103.6 253 34.8
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 5.1e-20 102.8 287 34.8
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 8.7e-20 102.1 318 30.8
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 2.1e-18 97.4 317 29.3
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 4.8e-18 96.3 325 29.8
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 8.2e-18 95.5 240 35.0
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.8e-17 94.4 280 30.7
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 4.1e-17 93.2 260 31.9
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 1.2e-16 91.7 280 31.1
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.5e-16 91.3 171 39.2
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 3.4e-16 90.1 199 38.2
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 7.6e-16 89.0 177 41.2
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 1.0e-15 88.6 244 36.9
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 1.0e-15 88.6 202 37.1
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 1.2e-13 81.6 183 33.9
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 7.9e-13 79.0 180 37.2
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 1.0e-12 78.6 232 33.2
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 1.0e-12 78.6 232 33.2
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 3.0e-12 77.0 185 35.7
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 3.0e-12 77.0 185 35.7
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 1.6e-10 71.2 102 49.0
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 2.2e-10 70.9 265 29.1
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.2e-10 70.9 170 39.4
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.1e-09 68.6 257 30.4
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 3.1e-09 67.0 188 35.6
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 4.1e-09 66.6 213 31.9
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 6.9e-09 65.9 142 42.3
SMO340G0107 Selaginella moellendorffii HOM05D003676 ORTHO05D004262 1.5e-08 64.7 320 26.9
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 4.5e-08 63.2 136 34.6
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.7e-07 61.2 224 29.0
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.7e-07 61.2 224 29.0


User provided reference genes

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