Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32119 Sapria himalayana HOM05D003430 ORTHO05D004809 1.7e-66 255.8 122 100.0
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 4.8e-16 88.2 63 69.8
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 6.2e-16 87.8 64 70.3
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 8.1e-16 87.4 63 69.8
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 1.8e-15 86.3 64 68.8
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 1.8e-15 86.3 64 68.8
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 3.1e-15 85.5 64 68.8
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 4.0e-15 85.1 64 68.8
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 5.3e-15 84.7 64 67.2
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 5.3e-15 84.7 64 67.2
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 6.9e-15 84.3 63 69.8
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 6.9e-15 84.3 63 69.8
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 6.9e-15 84.3 63 69.8
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 6.9e-15 84.3 63 69.8
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 6.9e-15 84.3 63 69.8
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 6.9e-15 84.3 64 67.2
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 9.0e-15 84.0 63 68.3
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 1.2e-14 83.6 64 67.2
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 1.2e-14 83.6 71 63.4
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-14 83.2 63 68.3
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-14 83.2 63 68.3
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-14 83.2 63 68.3
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 1.5e-14 83.2 63 68.3
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 2.0e-14 82.8 64 67.2
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.0e-14 82.8 64 65.6
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.0e-14 82.8 64 65.6
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.0e-14 82.8 64 65.6
Solyc10g076630.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.0e-14 82.8 64 65.6
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 2.6e-14 82.4 64 67.2
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.4e-14 82.0 65 63.1
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 4.5e-14 81.6 64 67.2
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 5.8e-14 81.3 64 65.6
SHI03773 Sapria himalayana HOM05D003430 ORTHO05D004809 5.8e-14 81.3 64 60.9
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 7.6e-14 80.9 63 66.7
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 7.6e-14 80.9 64 65.6
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 9.9e-14 80.5 64 64.1
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 1.7e-13 79.7 118 39.8
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.7e-13 79.7 63 66.7
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 1.7e-13 79.7 63 65.1
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 1.7e-13 79.7 63 65.1
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 2.2e-13 79.3 64 62.5
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 2.2e-13 79.3 64 65.6
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 2.2e-13 79.3 63 66.7
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 2.9e-13 79.0 64 64.1
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 3.8e-13 78.6 64 64.1
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 4.9e-13 78.2 64 62.5
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 4.9e-13 78.2 64 62.5
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 1.1e-12 77.0 63 65.1
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.1e-12 77.0 64 64.1
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 1.1e-12 77.0 63 65.1
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 1.9e-12 76.3 64 62.5
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 2.4e-12 75.9 64 62.5
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 2.4e-12 75.9 64 62.5
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 3.2e-12 75.5 64 60.9
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.2e-12 75.5 120 40.8
SHI20518 Sapria himalayana HOM05D003430 ORTHO05D004809 3.2e-12 75.5 54 70.4
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 7.1e-12 74.3 58 65.5
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 1.6e-11 73.2 64 65.6
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 1.6e-11 73.2 64 65.6
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 5.1e-10 68.2 63 58.7
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 1.5e-09 66.6 64 56.2
Solyc03g013370.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.3e-09 65.5 56 62.5
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 9.6e-09 63.9 64 56.2
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 1.3e-08 63.5 43 72.1
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 1.4e-07 60.1 43 67.4
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 1.8e-07 59.7 85 48.2


User provided reference genes

Program Settings