Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32039 Sapria himalayana HOM05D004993 ORTHO05D000001 2.2e-41 171.8 81 100.0
SHI38837 Sapria himalayana HOM05D004993 ORTHO05D000001 9.2e-32 139.8 81 82.7
SHI11018 Sapria himalayana HOM05D004993 ORTHO05D000001 6.6e-30 133.7 80 80.0
SHI29111 Sapria himalayana HOM05D004993 ORTHO05D000001 3.3e-29 131.3 80 76.2
SHI14760 Sapria himalayana HOM05D004993 ORTHO05D000001 9.5e-29 129.8 80 78.8
SHI18682 Sapria himalayana HOM05D004993 ORTHO05D000001 1.6e-28 129.0 69 84.1
SHI27389 Sapria himalayana HOM05D004993 ORTHO05D000001 1.0e-27 126.3 76 77.6
SHI34508 Sapria himalayana HOM05D004993 ORTHO05D000001 2.6e-26 121.7 81 75.3
SHI49824 Sapria himalayana HOM05D004993 ORTHO05D000001 2.6e-26 121.7 81 75.3
SHI49903 Sapria himalayana HOM05D004993 ORTHO05D000001 2.6e-26 121.7 81 75.3
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.9e-25 117.5 77 71.4
SHI42894 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-24 116.3 73 75.3
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-24 115.5 80 67.5
Hma1.2p1_0315F.1_g122550 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 4.1e-24 114.4 77 67.5
SHI04431 Sapria himalayana HOM05D004993 ORTHO05D000001 4.1e-24 114.4 72 77.8
SHI22042 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-24 113.6 67 80.6
SHI18346 Sapria himalayana HOM05D004993 ORTHO05D000001 9.2e-24 113.2 67 77.6
Hma1.2p1_0022F.1_g014640 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 2.7e-23 111.7 77 67.5
Hma1.2p1_0242F.1_g100810 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 7.3e-21 103.6 77 63.6
Atru.chr10.1206 Acer truncatum HOM05D000002 ORTHO05D000001 2.8e-20 101.7 71 66.2
Hma1.2p1_2459F.1_g322540 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 1.4e-19 99.4 61 73.8
Hma1.2p1_0270F.1_g108510 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 2.0e-18 95.5 76 55.3
SHI03321 Sapria himalayana HOM05D004993 ORTHO05D000001 4.9e-17 90.9 51 82.4
Hma1.2p1_0203F.1_g086190 Hydrangea macrophylla HOM05D011146 ORTHO05D012706 2.4e-16 88.6 64 65.6
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-14 81.6 72 52.8
TPR.G512 Trifolium pratense HOM05D011146 ORTHO05D012706 3.0e-14 81.6 63 58.7
SHI33760 Sapria himalayana HOM05D002029 ORTHO05D002158 1.1e-13 79.7 72 56.9
Hma1.2p1_1611F.1_g293530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-13 79.0 73 49.3
Sopen01g008940 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-13 78.6 70 50.0
Hma1.2p1_0473F.1_g160130 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-13 77.8 72 50.0
Hma1.2p1_0565F.1_g179600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-13 77.8 72 50.0
Nn8g38577 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.7e-12 74.3 74 54.1
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.7e-12 74.3 73 50.7
CsaV3_6G001980 Cucumis sativus L. HOM05D004993 ORTHO05D000001 6.2e-12 73.9 73 43.8
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-11 73.2 73 47.9
Hma1.2p1_0252F.1_g102700 Hydrangea macrophylla HOM05D000002 ORTHO05D012706 1.4e-11 72.8 55 58.2
Sopen01g011050 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-11 71.6 67 47.8
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.2e-11 70.9 72 47.2
Hma1.2p1_1270F.1_g271670 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.2e-11 70.9 73 45.2
PGR102G3059 Punica granatum HOM05D000002 ORTHO05D000001 1.5e-10 69.3 73 45.2
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-10 68.6 71 49.3
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 2.6e-10 68.6 73 45.2
SHI50795 Sapria himalayana HOM05D004993 ORTHO05D000001 4.4e-10 67.8 37 86.5
SHI51781 Sapria himalayana HOM05D004993 ORTHO05D000001 4.4e-10 67.8 37 86.5
SHI11257 Sapria himalayana HOM05D004993 ORTHO05D000001 9.9e-10 66.6 37 83.8
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.3e-09 66.2 73 43.8
Hma1.2p1_0133F.1_g061100 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 1.3e-09 66.2 75 48.0
Hma1.2p1_0459F.1_g157220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-09 66.2 72 45.8
CiPaw.14G131300 Carya illinoinensis HOM05D000750 ORTHO05D000714 3.7e-09 64.7 72 47.2
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 3.7e-09 64.7 66 47.0
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 3.7e-09 64.7 66 47.0
COL.COLO4_33905 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.9e-09 64.3 67 46.3
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-08 62.4 72 41.7
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.2e-08 61.6 73 42.5
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 3.2e-08 61.6 73 39.7
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.1e-08 61.2 71 46.5
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 5.4e-08 60.8 63 50.8
TPR.G24932 Trifolium pratense HOM05D000002 ORTHO05D000001 5.4e-08 60.8 73 41.1
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.1e-08 60.5 67 41.8
Hma1.2p1_1626F.1_g294340 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 7.1e-08 60.5 58 48.3
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 9.2e-08 60.1 73 38.4
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.2e-07 59.7 61 49.2
BcaC01g00635 Brassica carinata HOM05D030859 ORTHO05D000001 1.6e-07 59.3 71 42.3
Lj2C1206G8 Lonicera japonica HOM05D014274 ORTHO05D000001 1.6e-07 59.3 65 46.2
Sopen12g009540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 59.3 77 40.3
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.1e-07 58.9 67 40.3
Sopen07g023540 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 58.9 54 48.1
BcaC06g34903 Brassica carinata HOM05D030859 ORTHO05D000001 3.5e-07 58.2 71 42.3
Sopen08g008710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-07 58.2 51 51.0
Lj3g0007998 Lotus japonicus HOM05D000002 ORTHO05D000001 4.6e-07 57.8 73 38.4
QL02p077346 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-07 57.8 73 35.6
FvH4_6g11492 Fragaria vesca HOM05D000002 ORTHO05D000001 6.0e-07 57.4 63 49.2
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-07 57.4 80 38.8
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.8e-07 57.0 70 35.7
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 7.8e-07 57.0 76 39.5
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.0e-06 56.6 80 37.5
BcaC09g48989 Brassica carinata HOM05D030859 ORTHO05D000001 1.0e-06 56.6 74 39.2
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-06 56.6 80 37.5
PSO478G4367 Papaver somniferum HOM05D000002 ORTHO05D000001 1.0e-06 56.6 74 39.2
SHI07546 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 56.6 69 37.7
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-06 56.2 73 37.0
Hma1.2p1_0616F.1_g189980 Hydrangea macrophylla HOM05D014173 ORTHO05D000001 1.3e-06 56.2 35 71.4
Hma1.2p1_2397F.1_g321370 Hydrangea macrophylla HOM05D014173 ORTHO05D000001 1.3e-06 56.2 35 71.4
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 1.3e-06 56.2 62 46.8
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 1.7e-06 55.8 73 34.2
TWI39G0276 Tripterygium wilfordii HOM05D010760 ORTHO05D000001 1.7e-06 55.8 75 36.0
Eucgr.E01636 Eucalyptus grandis HOM05D000002 ORTHO05D000001 2.3e-06 55.5 72 38.9
GSVIVG01036374001 Vitis vinifera HOM05D000067 ORTHO05D000097 2.3e-06 55.5 47 51.1
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 3.0e-06 55.1 73 38.4
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-06 55.1 80 36.2
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 3.9e-06 54.7 46 50.0
HanXRQChr02g0040961 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-06 54.7 71 35.2
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-06 54.7 73 37.0
PSO063G7613 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-06 54.7 77 36.4
SHI11483 Sapria himalayana HOM05D014065 ORTHO05D000001 6.6e-06 53.9 69 36.2
SHI16346 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-06 53.9 69 36.2
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-06 53.5 76 34.2
ECA246G1142 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-06 53.5 73 35.6


User provided reference genes

Program Settings