Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32022 Sapria himalayana HOM05D000452 ORTHO05D002419 5.6e-42 173.7 79 100.0
SHI42704 Sapria himalayana HOM05D001607 ORTHO05D001893 8.7e-11 70.1 96 40.6
SHI26875 Sapria himalayana HOM05D000452 ORTHO05D002419 1.5e-10 69.3 29 93.1
SHI34873 Sapria himalayana HOM05D000452 ORTHO05D002419 7.4e-10 67.0 30 86.7
SHI27266 Sapria himalayana HOM05D000452 ORTHO05D002419 2.1e-09 65.5 30 86.7
Manes.10G046900 Manihot esculenta HOM05D000452 ORTHO05D002419 1.4e-08 62.8 174 28.7
SHI45657 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-08 62.8 101 38.6
SHI38141 Sapria himalayana HOM05D000452 ORTHO05D002419 1.8e-08 62.4 30 83.3
SHI45003 Sapria himalayana HOM05D001607 ORTHO05D001893 4.0e-08 61.2 62 53.2
SHI42886 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-07 59.7 29 86.2
Manes.07G099200 Manihot esculenta HOM05D000452 ORTHO05D002419 2.0e-07 58.9 170 29.4
SHI38337 Sapria himalayana HOM05D000452 ORTHO05D002419 2.6e-07 58.5 26 88.5
SHI38368 Sapria himalayana HOM05D000452 ORTHO05D002419 2.6e-07 58.5 26 88.5
PGR102G3153 Punica granatum HOM05D000452 ORTHO05D002419 3.4e-07 58.2 28 78.6
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 3.4e-07 58.2 29 79.3
Duzib168G2410 Durio zibethinus HOM05D000452 ORTHO05D002419 4.5e-07 57.8 30 70.0
QL11p052079 Quercus lobata HOM05D000452 ORTHO05D002419 4.5e-07 57.8 33 72.7
THA.LOC104800597 Tarenaya hassleriana HOM05D000452 ORTHO05D002419 4.5e-07 57.8 28 78.6
Gohir.1Z049569 Gossypium hirsutum HOM05D000452 ORTHO05D002419 5.8e-07 57.4 33 69.7
SHI33457 Sapria himalayana HOM05D013616 ORTHO05D369452 5.8e-07 57.4 61 47.5
Manes.11G146900 Manihot esculenta HOM05D000452 ORTHO05D002419 7.6e-07 57.0 28 75.0
Potri.009G011200 Populus trichocarpa HOM05D000452 ORTHO05D002419 7.6e-07 57.0 29 72.4
SHI44375 Sapria himalayana HOM05D000452 ORTHO05D002419 7.6e-07 57.0 27 81.5
Dinv31315 Davidia involucrata HOM05D000452 ORTHO05D002419 9.9e-07 56.6 28 75.0
Aa31LG5G7880 Aethionema arabicum HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
AL4G21760 Arabidopsis lyrata HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
AT2G28320 Arabidopsis thaliana HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
arahy.Tifrunner.gnm1.ann1.P7YJ1Q Arachis hypogaea HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
arahy.Tifrunner.gnm1.ann1.W5QVW0 Arachis hypogaea HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
Carub.0004s0922 Capsella rubella HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
Ca_01403_v3 Cicer arietinum L. HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
Thhalv10016308m.g Eutrema salsugineum HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
Lj3g0020118 Lotus japonicus HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
MD11G1137600 Malus domestica HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
Medtr2g094620 Medicago truncatula HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
Potri.010G223400 Populus trichocarpa HOM05D000452 ORTHO05D002419 1.3e-06 56.2 27 77.8
Prupe.6G103400 Prunus persica HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
RcHm_v2.0_Chr5g0058701 Rosa chinensis HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
SHI29700 Sapria himalayana HOM05D000452 ORTHO05D000647 1.3e-06 56.2 48 50.0
SHI33456 Sapria himalayana HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
Sp4g11110 Schrenkiella parvula HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
TPR.G11625 Trifolium pratense HOM05D000452 ORTHO05D002419 1.3e-06 56.2 28 75.0
CANSAT56G4046 Cannabis sativa HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 71.4
Cpa.g.sc279.2 Carica papaya HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 75.0
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 71.4
FvH4_3g31950 Fragaria vesca HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 75.0
FAN21G0130 Fragaria x ananassa HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 75.0
Gohir.A03G032700 Gossypium hirsutum HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 71.4
Gohir.A05G104000 Gossypium hirsutum HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 71.4
Gohir.D03G135700 Gossypium hirsutum HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 71.4
Prupe.2G212800 Prunus persica HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 71.4
Thecc.09G342500 Theobroma cacao HOM05D000452 ORTHO05D002419 1.7e-06 55.8 28 71.4
Atru.chr12.788 Acer truncatum HOM05D000452 ORTHO05D002419 2.2e-06 55.5 28 67.9
Eucgr.B02509 Eucalyptus grandis HOM05D000452 ORTHO05D002419 2.2e-06 55.5 28 75.0
Gohir.A08G198900 Gossypium hirsutum HOM05D000452 ORTHO05D002419 2.2e-06 55.5 29 69.0
Gohir.D05G103800 Gossypium hirsutum HOM05D000452 ORTHO05D002419 2.2e-06 55.5 28 71.4
Gohir.D08G216300 Gossypium hirsutum HOM05D000452 ORTHO05D002419 2.2e-06 55.5 29 69.0
Gorai.004G230200 Gossypium raimondii HOM05D000452 ORTHO05D002419 2.2e-06 55.5 29 69.0
Gorai.009G108000 Gossypium raimondii HOM05D000452 ORTHO05D002419 2.2e-06 55.5 28 71.4
Lalb_Chr24g0394681 Lupinus albus HOM05D000452 ORTHO05D002419 2.2e-06 55.5 28 75.0
GSVIVG01025201001 Vitis vinifera HOM05D000452 ORTHO05D002419 2.2e-06 55.5 28 71.4
AT3G54800 Arabidopsis thaliana HOM05D000452 ORTHO05D002419 2.9e-06 55.1 33 69.7
CANSAT54G2974 Cannabis sativa HOM05D000452 ORTHO05D002419 2.9e-06 55.1 29 69.0
Ciclev10027876m.g Citrus clementina HOM05D000452 ORTHO05D002419 2.9e-06 55.1 28 75.0
Dinv36429 Davidia involucrata HOM05D000452 ORTHO05D002419 2.9e-06 55.1 28 71.4
Duzib106G1110 Durio zibethinus HOM05D000452 ORTHO05D002419 2.9e-06 55.1 28 75.0
SHI36116 Sapria himalayana HOM05D000004 ORTHO05D368529 2.9e-06 55.1 44 59.1
TAR623G0432 Trochodendron aralioides HOM05D000452 ORTHO05D002419 2.9e-06 55.1 27 74.1
arahy.Tifrunner.gnm1.ann1.LXS6II Arachis hypogaea HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
arahy.Tifrunner.gnm1.ann1.W6SAF4 Arachis hypogaea HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
A07p18860 Brassica napus HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
C04p23200 Brassica napus HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
BolC4t23816H Brassica oleracea HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
BraA07t29593Z Brassica rapa HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
Glyma.12G174400 Glycine max HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
Glyma.13G325000 Glycine max HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
Sc06g0010330 Simmondsia chinensis HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
VMungo1080G1144 Vigna mungo HOM05D000452 ORTHO05D002419 3.8e-06 54.7 28 71.4
MSTRG.379 Avicennia marina HOM05D000452 ORTHO05D002419 4.9e-06 54.3 27 77.8
Cfa011304 Carpinus fangiana HOM05D000452 ORTHO05D002419 4.9e-06 54.3 27 74.1
Duzib170G0734 Durio zibethinus HOM05D000452 ORTHO05D002419 4.9e-06 54.3 28 71.4
Migut.F01750 Erythranthe guttata HOM05D000452 ORTHO05D002419 4.9e-06 54.3 27 77.8
Oeu001283.1 Olea europaea HOM05D000452 ORTHO05D002419 4.9e-06 54.3 28 67.9
QL01p021876 Quercus lobata HOM05D000452 ORTHO05D002419 4.9e-06 54.3 33 69.7
MSTRG.27473 Avicennia marina HOM05D000452 ORTHO05D002419 6.4e-06 53.9 27 77.8
Eucgr.G02842 Eucalyptus grandis HOM05D000452 ORTHO05D002419 6.4e-06 53.9 28 71.4
Gohir.A06G167800 Gossypium hirsutum HOM05D000452 ORTHO05D002419 6.4e-06 53.9 28 71.4
Gohir.D06G175200 Gossypium hirsutum HOM05D000452 ORTHO05D002419 6.4e-06 53.9 28 71.4
Gorai.010G205600 Gossypium raimondii HOM05D000452 ORTHO05D002419 6.4e-06 53.9 28 71.4
Lalb_Chr22g0350291 Lupinus albus HOM05D000452 ORTHO05D002419 6.4e-06 53.9 28 71.4
Potri.008G038800 Populus trichocarpa HOM05D000452 ORTHO05D002419 6.4e-06 53.9 27 74.1
SHI39836 Sapria himalayana HOM05D000452 ORTHO05D002419 6.4e-06 53.9 23 91.3
THA.LOC104825231 Tarenaya hassleriana HOM05D000452 ORTHO05D002419 6.4e-06 53.9 33 66.7
Thecc.10G075600 Theobroma cacao HOM05D000452 ORTHO05D002419 6.4e-06 53.9 28 71.4
TAR633G0066 Trochodendron aralioides HOM05D000452 ORTHO05D002419 6.4e-06 53.9 28 71.4
Atru.chr3.3610 Acer truncatum HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
Duzib114G0095 Durio zibethinus HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 71.4
FvH4_7g19330 Fragaria vesca HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
FAN01G2270 Fragaria x ananassa HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
FAN03G3088 Fragaria x ananassa HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
FAN06G3419 Fragaria x ananassa HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
FAN10G1181 Fragaria x ananassa HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
FAN10G3087 Fragaria x ananassa HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
Gorai.003G142800 Gossypium raimondii HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
Hma1.2p1_0058F.1_g032430 Hydrangea macrophylla HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
Lalb_Chr02g0142231 Lupinus albus HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 71.4
MD01G1107900 Malus domestica HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
MD07G1173600 Malus domestica HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
PGR142G1506 Punica granatum HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
RcHm_v2.0_Chr1g0363211 Rosa chinensis HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9
Sabra08G0026500 Salix brachista HOM05D000452 ORTHO05D002419 8.4e-06 53.5 173 26.0
THA.LOC104826373 Tarenaya hassleriana HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 71.4
TAR369G0340 Trochodendron aralioides HOM05D000452 ORTHO05D002419 8.4e-06 53.5 28 67.9


User provided reference genes

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