Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31904 Sapria himalayana HOM05D003136 ORTHO05D003562 8.2e-63 243.4 113 100.0
TAR633G0221 Trochodendron aralioides HOM05D003136 ORTHO05D003562 5.2e-25 117.9 56 89.3
Actinidia06390 Actinidia chinensis HOM05D003136 ORTHO05D003562 2.0e-24 115.9 56 91.1
Actinidia21356 Actinidia chinensis HOM05D003136 ORTHO05D003562 2.0e-24 115.9 56 91.1
Nn3g21882 Nelumbo nucifera HOM05D003136 ORTHO05D003562 3.4e-24 115.2 56 89.3
Aqoxy2G02557 Aquilegia oxysepala HOM05D003136 ORTHO05D003562 5.7e-24 114.4 56 87.5
PSO210G0090 Papaver somniferum HOM05D003136 ORTHO05D003562 9.8e-24 113.6 56 87.5
Rhsim13G0000900 Rhododendron simsii HOM05D003136 ORTHO05D003562 9.8e-24 113.6 56 89.3
vmacro02370 Vaccinium macrocarpon HOM05D003136 ORTHO05D003562 9.8e-24 113.6 56 89.3
PSO761G0237 Papaver somniferum HOM05D003136 ORTHO05D003562 1.3e-23 113.2 56 85.7
Sc17g0000160 Simmondsia chinensis HOM05D003136 ORTHO05D003562 1.3e-23 113.2 56 87.5
TWI14G1445 Tripterygium wilfordii HOM05D003136 ORTHO05D003562 1.3e-23 113.2 56 87.5
GSVIVG01028201001 Vitis vinifera HOM05D003136 ORTHO05D003562 1.3e-23 113.2 56 85.7
Potri.014G114900 Populus trichocarpa HOM05D003136 ORTHO05D003562 1.7e-23 112.8 56 87.5
Sabra14G0085000 Salix brachista HOM05D003136 ORTHO05D003562 1.7e-23 112.8 56 87.5
CSS0015575 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D003562 2.2e-23 112.5 56 87.5
CSS0033262 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D003562 2.2e-23 112.5 56 87.5
Nn4g25407 Nelumbo nucifera HOM05D003136 ORTHO05D003562 2.2e-23 112.5 64 76.6
TAR365G0734 Trochodendron aralioides HOM05D003136 ORTHO05D003562 2.9e-23 112.1 56 87.5
Ah.11g045790 Amaranthus hybridus HOM05D003136 ORTHO05D003562 3.7e-23 111.7 56 83.9
AUR62011734 Chenopodium quinoa HOM05D003136 ORTHO05D003562 3.7e-23 111.7 56 85.7
TWI59G0671 Tripterygium wilfordii HOM05D003136 ORTHO05D003562 3.7e-23 111.7 56 83.9
Gorai.007G308800 Gossypium raimondii HOM05D003136 ORTHO05D003562 4.9e-23 111.3 81 61.7
Rhsim11G0100200 Rhododendron simsii HOM05D003136 ORTHO05D003562 6.4e-23 110.9 58 79.3
Cfa004879 Carpinus fangiana HOM05D003136 ORTHO05D003562 8.3e-23 110.5 56 83.9
Haze_05118 Corylus avellana HOM05D003136 ORTHO05D003562 8.3e-23 110.5 56 83.9
Solyc01g068390.3 Solanum lycopersicum HOM05D003136 ORTHO05D003562 8.3e-23 110.5 56 83.9
Sopen01g030350 Solanum pennellii HOM05D003136 ORTHO05D003562 8.3e-23 110.5 56 83.9
PGSC0003DMG400017959 Solanum tuberosum HOM05D003136 ORTHO05D003562 8.3e-23 110.5 56 83.9
AL5G44980 Arabidopsis lyrata HOM05D003136 ORTHO05D003562 1.1e-22 110.2 56 83.9
AT3G62240 Arabidopsis thaliana HOM05D003136 ORTHO05D003562 1.1e-22 110.2 56 83.9
CAN.G179.41 Capsicum annuum HOM05D003136 ORTHO05D003562 1.4e-22 109.8 56 82.1
Migut.D00028 Erythranthe guttata HOM05D003136 ORTHO05D003562 1.4e-22 109.8 56 83.9
Peaxi162Scf00309g00121 Petunia axillaris HOM05D003136 ORTHO05D003562 1.4e-22 109.8 56 82.1
Hund09694 Selenicereus undatus HOM05D003136 ORTHO05D003562 1.4e-22 109.8 56 83.9
SGA_v2.0_scaffold80G25692 Striga asiatica HOM05D003136 ORTHO05D003562 1.4e-22 109.8 56 83.9
CiPaw.08G084600 Carya illinoinensis HOM05D003136 ORTHO05D003562 1.8e-22 109.4 56 83.9
Ciclev10018861m.g Citrus clementina HOM05D003136 ORTHO05D003562 1.8e-22 109.4 56 83.9
Lsat_1_v5_gn_9_6521 Lactuca sativa HOM05D003136 ORTHO05D003562 1.8e-22 109.4 56 82.1
Thecc.01G322400 Theobroma cacao HOM05D003136 ORTHO05D003562 1.8e-22 109.4 56 82.1
Carub.0004s2983 Capsella rubella HOM05D003136 ORTHO05D003562 2.4e-22 109.0 56 83.9
CARHR172570 Cardamine hirsuta HOM05D003136 ORTHO05D003562 2.4e-22 109.0 56 85.7
AUR62024567 Chenopodium quinoa HOM05D003136 ORTHO05D003562 2.4e-22 109.0 56 83.9
Lju99C8T1 Lonicera japonica HOM05D003136 ORTHO05D003562 2.4e-22 109.0 56 80.4
MD04G1187900 Malus domestica HOM05D003136 ORTHO05D003562 2.4e-22 109.0 56 82.1
Carub.0005s2896 Capsella rubella HOM05D003136 ORTHO05D003562 3.2e-22 108.6 56 83.9
CiPaw.07G123400 Carya illinoinensis HOM05D003136 ORTHO05D003562 3.2e-22 108.6 56 83.9
FAN03G0588 Fragaria x ananassa HOM05D003136 ORTHO05D003562 3.2e-22 108.6 57 80.7
FAN06G2586 Fragaria x ananassa HOM05D003136 ORTHO05D003562 3.2e-22 108.6 57 80.7
FAN10G2106 Fragaria x ananassa HOM05D003136 ORTHO05D003562 3.2e-22 108.6 57 80.7
MD02G1277600 Malus domestica HOM05D003136 ORTHO05D003562 3.2e-22 108.6 56 82.1
RcHm_v2.0_Chr5g0011091 Rosa chinensis HOM05D003136 ORTHO05D003562 3.2e-22 108.6 56 82.1
Manes.09G180200 Manihot esculenta HOM05D003136 ORTHO05D003562 4.1e-22 108.2 56 83.9
TPR.G4074 Trifolium pratense HOM05D003136 ORTHO05D003562 4.1e-22 108.2 56 82.1
AL4G46630 Arabidopsis lyrata HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 82.1
CSS0040158 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 80.4
MELO3C023608.2 Cucumis melo HOM05D003136 ORTHO05D003562 5.4e-22 107.8 58 79.3
Duzib133G0059 Durio zibethinus HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 80.4
Duzib138G1355 Durio zibethinus HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 80.4
FvH4_6g08350 Fragaria vesca HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 80.4
FAN05G2780 Fragaria x ananassa HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 80.4
FAN14G2912 Fragaria x ananassa HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 80.4
Lj2C1213G0 Lonicera japonica HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 80.4
Potri.002G189700 Populus trichocarpa HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 82.1
PGR142G2717 Punica granatum HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 82.1
Sed0000670 Sechium edule HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 83.9
THA.LOC104802129 Tarenaya hassleriana HOM05D003136 ORTHO05D003562 5.4e-22 107.8 56 83.9
ClCG09G004660 Citrullus lanatus HOM05D003136 ORTHO05D003562 7.0e-22 107.5 56 82.1
Oeu009105.2 Olea europaea HOM05D003136 ORTHO05D003562 7.0e-22 107.5 56 82.1
RcHm_v2.0_Chr3g0458251 Rosa chinensis HOM05D003136 ORTHO05D003562 7.0e-22 107.5 56 80.4
Sabra02G0166100 Salix brachista HOM05D003136 ORTHO05D003562 7.0e-22 107.5 56 83.9
Sp5g01150 Schrenkiella parvula HOM05D003136 ORTHO05D003562 7.0e-22 107.5 56 82.1
Aa31LG10G16180 Aethionema arabicum HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 80.4
CARHR142470 Cardamine hirsuta HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 83.9
Eucgr.K00591 Eucalyptus grandis HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 82.1
Glyma.03G222900 Glycine max HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 83.9
HanXRQChr10g0285601 Helianthus annuus HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 78.6
Phvul.001G216400 Phaseolus vulgaris HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 83.9
RcHm_v2.0_Chr1g0326951 Rosa chinensis HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 80.4
Sp4g29080 Schrenkiella parvula HOM05D003136 ORTHO05D003562 9.2e-22 107.1 56 80.4
CSS0044264 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 82.1
Cpa.g.sc67.79 Carica papaya HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 82.1
Ca_09235_v3 Cicer arietinum L. HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 82.1
COL.COLO4_23158 Corchorus olitorius HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 80.4
FvH4_7g03760 Fragaria vesca HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 80.4
Gohir.A08G121050 Gossypium hirsutum HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 80.4
Gohir.A11G275200 Gossypium hirsutum HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 78.6
Gohir.A12G121400 Gossypium hirsutum HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 78.6
Gohir.D08G142350 Gossypium hirsutum HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 80.4
Gorai.004G146700 Gossypium raimondii HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 80.4
MD07G1045700 Malus domestica HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 82.1
Manes.05G010800 Manihot esculenta HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 82.1
Medtr7g110170 Medicago truncatula HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 82.1
QL12p034332 Quercus lobata HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 80.4
Sed0004994 Sechium edule HOM05D003136 ORTHO05D003562 1.2e-21 106.7 56 80.4
Actinidia35493 Actinidia chinensis HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 78.6
MSTRG.21725 Avicennia marina HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 80.4
BcaC08g45188 Brassica carinata HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 78.6
C06p28160 Brassica napus HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 78.6
BolC6t37982H Brassica oleracea HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 78.6
CsaV3_7G030450 Cucumis sativus L. HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 80.4
FAN09G0203 Fragaria x ananassa HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 78.6
Gorai.007G119400 Gossypium raimondii HOM05D003136 ORTHO05D003562 1.6e-21 106.3 56 78.6
AT2G47090 Arabidopsis thaliana HOM05D003136 ORTHO05D003562 2.0e-21 105.9 56 80.4
EL10As5g23580 Beta vulgaris HOM05D003136 ORTHO05D003562 2.0e-21 105.9 56 80.4
Glyma.19G220000 Glycine max HOM05D003136 ORTHO05D003562 2.0e-21 105.9 56 83.9
Lj1g0020409 Lotus japonicus HOM05D003136 ORTHO05D003562 2.0e-21 105.9 56 82.1
A07p25910 Brassica napus HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 78.6
BraA07t30238Z Brassica rapa HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 78.6
CANSAT35G1199 Cannabis sativa HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 76.8
Thhalv10005791m.g Eutrema salsugineum HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 78.6
Gohir.D11G285600 Gossypium hirsutum HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 78.6
Gohir.D12G125100 Gossypium hirsutum HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 76.8
Gorai.008G136100 Gossypium raimondii HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 76.8
Psat3g017600 Pisum sativum HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 80.4
Prupe.2G042900 Prunus persica HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 82.1
QL03p009619 Quercus lobata HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 80.4
QL93p2005_0002 Quercus lobata HOM05D003136 ORTHO05D003562 2.7e-21 105.5 56 80.4
Gohir.A11G106550 Gossypium hirsutum HOM05D003136 ORTHO05D003562 3.5e-21 105.1 56 78.6
MBI18_g09618_MAGBIO Magnolia biondii HOM05D003136 ORTHO05D003562 3.5e-21 105.1 57 78.9
Thecc.05G328100 Theobroma cacao HOM05D003136 ORTHO05D003562 3.5e-21 105.1 56 76.8
Atru.chr5.904 Acer truncatum HOM05D003136 ORTHO05D003562 4.6e-21 104.8 56 78.6
Thhalv10001330m.g Eutrema salsugineum HOM05D003136 ORTHO05D003562 4.6e-21 104.8 56 82.1
DCAR_001894 Daucus carota HOM05D003136 ORTHO05D003562 5.9e-21 104.4 58 77.6
FAN01G0053 Fragaria x ananassa HOM05D003136 ORTHO05D003562 5.9e-21 104.4 56 78.6
HanXRQChr15g0464391 Helianthus annuus HOM05D003136 ORTHO05D003562 5.9e-21 104.4 56 76.8
BcaC02g12595 Brassica carinata HOM05D003136 ORTHO05D003562 7.8e-21 104.0 56 82.1
C04p00850 Brassica napus HOM05D003136 ORTHO05D003562 7.8e-21 104.0 56 82.1
BolC4t21714H Brassica oleracea HOM05D003136 ORTHO05D003562 7.8e-21 104.0 56 82.1
COL.COLO4_05504 Corchorus olitorius HOM05D003136 ORTHO05D003562 7.8e-21 104.0 63 71.4
SalBow6G6137 Salvia bowleyana HOM05D003136 ORTHO05D003562 7.8e-21 104.0 56 78.6
THA.LOC104827656 Tarenaya hassleriana HOM05D003136 ORTHO05D003562 7.8e-21 104.0 56 78.6
Gohir.D11G111500 Gossypium hirsutum HOM05D003136 ORTHO05D003562 1.0e-20 103.6 56 76.8
Lalb_Chr06g0167071 Lupinus albus HOM05D003136 ORTHO05D003562 1.0e-20 103.6 56 78.6
Lalb_Chr04g0260111 Lupinus albus HOM05D003136 ORTHO05D003562 1.3e-20 103.2 56 78.6
Lalb_Chr15g0077921 Lupinus albus HOM05D003136 ORTHO05D003562 1.3e-20 103.2 56 78.6
Zm00001eb007030 Zea mays HOM05D003136 ORTHO05D003562 1.3e-20 103.2 56 75.0
A05p00710 Brassica napus HOM05D003136 ORTHO05D003562 1.7e-20 102.8 56 80.4
CDE02G3464 Ceratophyllum demersum HOM05D001037 ORTHO05D003562 2.3e-20 102.4 56 76.8
Os05g0279400 Oryza sativa ssp. japonica HOM05D003136 ORTHO05D003562 2.3e-20 102.4 56 76.8
CDE08G0964 Ceratophyllum demersum HOM05D003136 ORTHO05D003562 3.0e-20 102.1 56 76.8
Cc01_g21900 Coffea canephora HOM05D003136 ORTHO05D003562 3.0e-20 102.1 56 76.8
BcaB02g08802 Brassica carinata HOM05D003136 ORTHO05D003562 3.9e-20 101.7 56 80.4
SMO367G1085 Selaginella moellendorffii HOM05D003136 ORTHO05D003562 6.6e-20 100.9 59 69.5
vmacro01615 Vaccinium macrocarpon HOM05D003136 ORTHO05D003562 1.1e-19 100.1 56 76.8
VMungo1383G3057 Vigna mungo HOM05D003136 ORTHO05D003562 1.1e-19 100.1 56 80.4
FAN11G1698 Fragaria x ananassa HOM05D003136 ORTHO05D003562 1.5e-19 99.8 56 75.0
arahy.Tifrunner.gnm1.ann1.3N4E8I Arachis hypogaea HOM05D003136 ORTHO05D003562 1.9e-19 99.4 56 76.8
arahy.Tifrunner.gnm1.ann1.3UY4XW Arachis hypogaea HOM05D003136 ORTHO05D003562 1.9e-19 99.4 56 76.8
Lalb_Chr18g0046491 Lupinus albus HOM05D003136 ORTHO05D003562 1.9e-19 99.4 57 73.7
Potri.013G004200 Populus trichocarpa HOM05D003136 ORTHO05D003562 1.9e-19 99.4 56 73.2
Sabra13G0003400 Salix brachista HOM05D003136 ORTHO05D003562 1.9e-19 99.4 56 73.2
ECA247G2356 Erigeron canadensis HOM05D003136 ORTHO05D003562 2.5e-19 99.0 56 75.0
CANSAT54G2960 Cannabis sativa HOM05D003136 ORTHO05D003562 3.3e-19 98.6 56 71.4
Os01g0251200 Oryza sativa ssp. japonica HOM05D003136 ORTHO05D003562 4.3e-19 98.2 57 73.7
FAN21G2521 Fragaria x ananassa HOM05D003136 ORTHO05D003562 5.6e-19 97.8 56 73.2
FvH4_3g07600 Fragaria vesca HOM05D003136 ORTHO05D003562 7.3e-19 97.4 56 73.2
Potri.005G004600 Populus trichocarpa HOM05D003136 ORTHO05D003562 7.3e-19 97.4 56 71.4
Zm00001eb401260 Zea mays HOM05D003136 ORTHO05D003562 7.3e-19 97.4 56 69.6
ATR0693G331 Amborella trichopoda HOM05D003136 ORTHO05D003562 9.5e-19 97.1 56 75.0
Mapoly0106s0017 Marchantia polymorpha HOM05D003136 ORTHO05D003562 9.5e-19 97.1 56 69.6
EL10Ac4g09540 Beta vulgaris HOM05D003136 ORTHO05D003562 2.1e-18 95.9 55 70.9
Oeu002574.1 Olea europaea HOM05D003136 ORTHO05D003562 6.2e-18 94.4 56 71.4
HPP92_002693 Vanilla planifolia HOM05D003136 ORTHO05D003562 6.2e-18 94.4 56 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1657 Anthoceros agrestis HOM05D003136 ORTHO05D003562 4.0e-17 91.7 57 63.2
FAN16G3343 Fragaria x ananassa HOM05D003136 ORTHO05D003562 8.9e-17 90.5 56 73.2
Oeu038063.1 Olea europaea HOM05D003136 ORTHO05D003562 8.9e-17 90.5 44 86.4
ECA246G1933 Erigeron canadensis HOM05D003136 ORTHO05D003562 4.4e-16 88.2 53 69.8
MCO13G180 Micromonas commoda HOM05D003136 ORTHO05D003562 4.1e-14 81.6 56 60.7
AUR62000461 Chenopodium quinoa HOM05D003136 ORTHO05D003562 3.5e-13 78.6 38 81.6
Pp3c19_13370 Physcomitrium patens HOM05D003136 ORTHO05D003562 1.6e-10 69.7 56 50.0
Nn2g12921 Nelumbo nucifera HOM05D003136 ORTHO05D003562 2.3e-09 65.9 38 71.1
CSS0046768 Camellia sinensis var. sinensis HOM05D003136 ORTHO05D003562 3.4e-08 62.0 47 53.2
Cre17.g696300 Chlamydomonas reinhardtii HOM05D003136 ORTHO05D003562 4.4e-08 61.6 53 39.6
BcaB02g07343 Brassica carinata HOM05D003136 ORTHO05D003562 1.4e-06 56.6 32 71.9


User provided reference genes

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