Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 2.0e-40 168.7 86 100.0
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 5.7e-24 114.0 87 62.1
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 1.7e-23 112.5 87 62.1
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 2.2e-23 112.1 87 62.1
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 2.2e-23 112.1 84 64.3
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 3.7e-23 111.3 87 60.9
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 1.8e-22 109.0 84 63.1
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 2.4e-22 108.6 84 61.9
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 4.1e-22 107.8 84 63.1
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 4.1e-22 107.8 65 75.4
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 4.1e-22 107.8 88 60.2
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 4.1e-22 107.8 66 74.2
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 7.0e-22 107.1 84 63.1
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 7.0e-22 107.1 65 75.4
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 7.0e-22 107.1 84 61.9
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 7.0e-22 107.1 65 75.4
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 7.0e-22 107.1 87 59.8
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 9.1e-22 106.7 65 73.8
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 9.1e-22 106.7 84 60.7
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-21 106.3 83 62.7
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 1.2e-21 106.3 83 62.7
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 1.2e-21 106.3 84 61.9
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 1.6e-21 105.9 87 59.8
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 2.0e-21 105.5 65 70.8
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 2.7e-21 105.1 83 62.7
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 2.7e-21 105.1 84 60.7
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 2.7e-21 105.1 63 76.2
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 2.7e-21 105.1 87 58.6
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 2.7e-21 105.1 69 68.1
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 3.5e-21 104.8 65 72.3
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 3.5e-21 104.8 75 66.7
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 3.5e-21 104.8 65 70.8
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 4.5e-21 104.4 65 73.8
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 4.5e-21 104.4 65 73.8
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 4.5e-21 104.4 65 73.8
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 4.5e-21 104.4 65 73.8
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 4.5e-21 104.4 65 72.3
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 5.9e-21 104.0 65 72.3
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 5.9e-21 104.0 64 75.0
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 7.7e-21 103.6 65 72.3
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 7.7e-21 103.6 84 58.3
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 7.7e-21 103.6 61 77.0
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 7.7e-21 103.6 63 74.6
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 1.0e-20 103.2 65 75.4
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.3e-20 102.8 64 73.4
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 1.7e-20 102.4 66 69.7
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 2.2e-20 102.1 65 70.8
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 2.2e-20 102.1 83 60.2
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 2.2e-20 102.1 65 70.8
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 2.2e-20 102.1 65 70.8
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 2.2e-20 102.1 62 72.6
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 2.2e-20 102.1 62 72.6
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 2.2e-20 102.1 65 70.8
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 2.9e-20 101.7 61 75.4
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 2.9e-20 101.7 63 71.4
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 2.9e-20 101.7 87 55.2
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 2.9e-20 101.7 59 79.7
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 3.8e-20 101.3 84 58.3
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 3.8e-20 101.3 84 58.3
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 3.8e-20 101.3 61 75.4
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 5.0e-20 100.9 84 59.5
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 5.0e-20 100.9 84 59.5
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 5.0e-20 100.9 64 70.3
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 5.0e-20 100.9 66 71.2
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 6.5e-20 100.5 60 76.7
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 6.5e-20 100.5 60 76.7
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 6.5e-20 100.5 68 66.2
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 6.5e-20 100.5 65 69.2
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 6.5e-20 100.5 57 80.7
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 6.5e-20 100.5 65 69.2
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 6.5e-20 100.5 57 80.7
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 6.5e-20 100.5 65 69.2
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 6.5e-20 100.5 57 80.7
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 6.5e-20 100.5 87 56.3
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 6.5e-20 100.5 65 67.7
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 6.5e-20 100.5 63 73.0
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 1.1e-19 99.8 57 80.7
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 1.1e-19 99.8 60 73.3
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 1.5e-19 99.4 63 71.4
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 1.5e-19 99.4 58 77.6
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 1.5e-19 99.4 57 78.9
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 1.9e-19 99.0 57 80.7
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 1.9e-19 99.0 57 78.9
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 1.9e-19 99.0 60 73.3
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 1.9e-19 99.0 60 73.3
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 1.9e-19 99.0 84 56.0
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 2.5e-19 98.6 62 71.0
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 3.2e-19 98.2 61 70.5
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.2e-19 98.2 63 68.3
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 3.2e-19 98.2 57 77.2
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 3.2e-19 98.2 58 77.6
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 3.2e-19 98.2 56 80.4
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 4.2e-19 97.8 60 73.3
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 4.2e-19 97.8 57 78.9
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 4.2e-19 97.8 58 75.9
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 5.5e-19 97.4 56 76.8
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 5.5e-19 97.4 63 68.3
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 5.5e-19 97.4 58 75.9
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 5.5e-19 97.4 57 77.2
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 5.5e-19 97.4 65 64.6
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 5.5e-19 97.4 64 68.8
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 7.2e-19 97.1 63 69.8
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 7.2e-19 97.1 57 75.4
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 7.2e-19 97.1 59 74.6
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 7.2e-19 97.1 59 74.6
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 7.2e-19 97.1 59 74.6
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 7.2e-19 97.1 59 74.6
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 7.2e-19 97.1 60 71.7
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 9.4e-19 96.7 61 70.5
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 9.4e-19 96.7 56 76.8
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 9.4e-19 96.7 58 74.1
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 9.4e-19 96.7 60 71.7
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 1.2e-18 96.3 56 78.6
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 1.2e-18 96.3 63 69.8
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.6e-18 95.9 57 73.7
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 1.6e-18 95.9 56 76.8
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 1.6e-18 95.9 61 70.5
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 1.6e-18 95.9 56 80.4
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 2.1e-18 95.5 84 54.8
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 2.1e-18 95.5 57 75.4
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 2.1e-18 95.5 56 75.0
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 2.1e-18 95.5 56 78.6
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 2.1e-18 95.5 60 70.0
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 2.7e-18 95.1 57 73.7
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 3.6e-18 94.7 64 64.1
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 3.6e-18 94.7 56 75.0
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 4.7e-18 94.4 56 76.8
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 4.7e-18 94.4 56 76.8
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 8.0e-18 93.6 56 75.0
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 8.0e-18 93.6 64 70.3
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 8.0e-18 93.6 85 55.3
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 1.0e-17 93.2 62 66.1
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.4e-17 92.8 56 75.0
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 1.4e-17 92.8 56 75.0
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 1.4e-17 92.8 63 68.3
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 6.8e-17 90.5 55 72.7
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-16 89.7 57 71.9
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 1.2e-16 89.7 57 71.9
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 4.4e-16 87.8 80 57.5
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 5.7e-16 87.4 73 56.2
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 7.5e-16 87.0 62 69.4
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 4.8e-15 84.3 68 63.2
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 2.4e-14 82.0 57 68.4
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 7.0e-14 80.5 76 50.0
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.7e-12 75.9 64 56.2
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 2.3e-12 75.5 55 67.3
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.9e-12 75.1 65 53.8
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 4.7e-10 67.8 64 50.0
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 4.7e-10 67.8 64 50.0
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 4.0e-09 64.7 52 61.5
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 2.2e-07 58.9 72 44.4


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