Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31755 Sapria himalayana HOM05D003272 ORTHO05D003776 2.8e-232 808.1 381 100.0
THA.LOC104802668 Tarenaya hassleriana HOM05D003272 ORTHO05D003776 5.3e-90 335.5 210 78.1
Cfa020144 Carpinus fangiana HOM05D003272 ORTHO05D003776 1.2e-89 334.3 210 78.1
THA.LOC104824482 Tarenaya hassleriana HOM05D003272 ORTHO05D003776 1.6e-89 334.0 210 77.1
arahy.Tifrunner.gnm1.ann1.LQ935E Arachis hypogaea HOM05D003272 ORTHO05D003776 2.7e-89 333.2 210 78.1
arahy.Tifrunner.gnm1.ann1.VD9RJB Arachis hypogaea HOM05D003272 ORTHO05D003776 2.7e-89 333.2 210 78.1
FAN02G4424 Fragaria x ananassa HOM05D003272 ORTHO05D003776 2.7e-89 333.2 220 73.6
Haze_20019 Corylus avellana HOM05D003272 ORTHO05D003776 4.5e-89 332.4 213 76.5
QL07p024475 Quercus lobata HOM05D003272 ORTHO05D003776 7.7e-89 331.6 216 75.0
Sp5g04670 Schrenkiella parvula HOM05D003272 ORTHO05D003776 1.3e-88 330.9 210 76.2
RcHm_v2.0_Chr3g0479241 Rosa chinensis HOM05D003272 ORTHO05D003776 1.7e-88 330.5 209 77.0
Atru.chr8.1154 Acer truncatum HOM05D003272 ORTHO05D003776 3.8e-88 329.3 213 77.9
Sabra06G0149200 Salix brachista HOM05D003272 ORTHO05D003776 3.8e-88 329.3 213 76.1
AL5G39720 Arabidopsis lyrata HOM05D003272 ORTHO05D003776 1.5e-87 327.4 210 75.7
FvH4_6g21890 Fragaria vesca HOM05D003272 ORTHO05D003776 1.9e-87 327.0 209 76.1
FAN14G3195 Fragaria x ananassa HOM05D003272 ORTHO05D003776 1.9e-87 327.0 209 76.1
Manes.09G037500 Manihot esculenta HOM05D003272 ORTHO05D003776 2.5e-87 326.6 210 77.1
Potri.016G060200 Populus trichocarpa HOM05D003272 ORTHO05D003776 2.5e-87 326.6 210 77.6
Potri.006G194500 Populus trichocarpa HOM05D003272 ORTHO05D003776 4.2e-87 325.9 210 76.7
Sabra16G0063100 Salix brachista HOM05D003272 ORTHO05D003776 9.4e-87 324.7 210 77.1
Ciclev10010926m.g Citrus clementina HOM05D003272 ORTHO05D003776 1.2e-86 324.3 210 77.6
TWI53G1277 Tripterygium wilfordii HOM05D003272 ORTHO05D003776 1.2e-86 324.3 210 76.7
FAN05G4520 Fragaria x ananassa HOM05D003272 ORTHO05D003776 1.6e-86 323.9 209 75.6
CiPaw.10G025200 Carya illinoinensis HOM05D003272 ORTHO05D003776 2.1e-86 323.6 208 76.0
Hund24815 Selenicereus undatus HOM05D003272 ORTHO05D003776 2.7e-86 323.2 210 75.2
VMungo1383G1563 Vigna mungo HOM05D003272 ORTHO05D003776 2.7e-86 323.2 210 74.8
FAN09G3998 Fragaria x ananassa HOM05D003272 ORTHO05D003776 3.6e-86 322.8 209 74.6
Lj1g0008912 Lotus japonicus HOM05D003272 ORTHO05D003776 3.6e-86 322.8 210 75.2
Ca_08539_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 4.7e-86 322.4 210 75.2
ECA238G2479 Erigeron canadensis HOM05D003272 ORTHO05D003776 6.1e-86 322.0 210 76.2
HanXRQChr14g0438261 Helianthus annuus HOM05D003272 ORTHO05D003776 6.1e-86 322.0 216 74.5
TWI77G0466 Tripterygium wilfordii HOM05D003272 ORTHO05D003776 8.0e-86 321.6 210 76.7
MD14G1054100 Malus domestica HOM05D003272 ORTHO05D003776 1.0e-85 321.2 210 75.2
CARHR168370 Cardamine hirsuta HOM05D003272 ORTHO05D003776 1.4e-85 320.9 210 72.9
Rhsim04G0095400 Rhododendron simsii HOM05D003272 ORTHO05D003776 1.4e-85 320.9 211 74.4
COL.COLO4_29357 Corchorus olitorius HOM05D003272 ORTHO05D003776 1.8e-85 320.5 210 77.1
Dinv16344 Davidia involucrata HOM05D003272 ORTHO05D003776 1.8e-85 320.5 210 76.2
Glyma.03G146500 Glycine max HOM05D003272 ORTHO05D003776 1.8e-85 320.5 210 74.8
Ca_12036_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 2.3e-85 320.1 213 74.6
Ah.04g152770 Amaranthus hybridus HOM05D003272 ORTHO05D003776 3.0e-85 319.7 211 73.9
Cpa.g.sc85.47 Carica papaya HOM05D003272 ORTHO05D003776 3.0e-85 319.7 210 75.7
CSS0044868 Camellia sinensis var. sinensis HOM05D003272 ORTHO05D003776 4.0e-85 319.3 210 75.2
AT3G58050 Arabidopsis thaliana HOM05D003272 ORTHO05D003776 5.2e-85 318.9 210 73.3
EL10Ac3g06883 Beta vulgaris HOM05D003272 ORTHO05D003776 5.2e-85 318.9 210 74.8
Glyma.19G149800 Glycine max HOM05D003272 ORTHO05D003776 5.2e-85 318.9 210 74.3
Gohir.D01G124900 Gossypium hirsutum HOM05D003272 ORTHO05D003776 5.2e-85 318.9 217 74.2
Gorai.002G155500 Gossypium raimondii HOM05D003272 ORTHO05D003776 5.2e-85 318.9 217 74.2
Phvul.001G144300 Phaseolus vulgaris HOM05D003272 ORTHO05D003776 5.2e-85 318.9 208 75.0
TPR.G13362 Trifolium pratense HOM05D003272 ORTHO05D003776 5.2e-85 318.9 210 75.2
Psat0s4022g0120 Pisum sativum HOM05D003272 ORTHO05D003776 6.8e-85 318.5 210 74.8
MBI13_g29652_MAGBIO Magnolia biondii HOM05D003272 ORTHO05D003776 8.8e-85 318.2 207 73.9
Thecc.05G174800 Theobroma cacao HOM05D003272 ORTHO05D003776 1.2e-84 317.8 210 75.7
Duzib093G2065 Durio zibethinus HOM05D003272 ORTHO05D003776 1.5e-84 317.4 217 73.3
Medtr1g054355 Medicago truncatula HOM05D003272 ORTHO05D003776 1.5e-84 317.4 210 75.2
vmacro22626 Vaccinium macrocarpon HOM05D003272 ORTHO05D003776 1.5e-84 317.4 210 74.8
AUR62015331 Chenopodium quinoa HOM05D003272 ORTHO05D003776 2.6e-84 316.6 210 73.8
Lalb_Chr04g0259561 Lupinus albus HOM05D003272 ORTHO05D003776 2.6e-84 316.6 210 74.8
Lalb_Chr15g0079101 Lupinus albus HOM05D003272 ORTHO05D003776 2.6e-84 316.6 210 74.3
Peaxi162Scf00463g00423 Petunia axillaris HOM05D003272 ORTHO05D003776 2.6e-84 316.6 210 74.8
Gohir.A04G054400 Gossypium hirsutum HOM05D003272 ORTHO05D003776 3.4e-84 316.2 210 75.2
SalBow6G0671 Salvia bowleyana HOM05D003272 ORTHO05D003776 3.4e-84 316.2 207 73.9
TPR.G30306 Trifolium pratense HOM05D003272 ORTHO05D003776 3.4e-84 316.2 210 75.2
Aa31LG10G12750 Aethionema arabicum HOM05D003272 ORTHO05D003776 5.7e-84 315.5 210 73.3
Duzib106G0166 Durio zibethinus HOM05D003272 ORTHO05D003776 5.7e-84 315.5 217 73.3
Lj2C363G5 Lonicera japonica HOM05D003272 ORTHO05D003776 7.5e-84 315.1 226 69.9
GSVIVG01033469001 Vitis vinifera HOM05D003272 ORTHO05D003776 9.8e-84 314.7 210 74.8
CANSAT64G1991 Cannabis sativa HOM05D003272 ORTHO05D003776 1.7e-83 313.9 215 71.6
AUR62012007 Chenopodium quinoa HOM05D003272 ORTHO05D003776 1.7e-83 313.9 210 73.3
ClCG04G000900 Citrullus lanatus HOM05D003272 ORTHO05D003776 1.7e-83 313.9 210 74.8
Cc06_g15520 Coffea canephora HOM05D003272 ORTHO05D003776 1.7e-83 313.9 210 74.3
MELO3C009057.2 Cucumis melo HOM05D003272 ORTHO05D003776 1.7e-83 313.9 210 74.8
CsaV3_4G031310 Cucumis sativus L. HOM05D003272 ORTHO05D003776 1.7e-83 313.9 210 74.8
Lsat_1_v5_gn_1_60961 Lactuca sativa HOM05D003272 ORTHO05D003776 1.7e-83 313.9 209 73.7
DCAR_013670 Daucus carota HOM05D003272 ORTHO05D003776 2.2e-83 313.5 210 74.3
Nitab4.5_0002339g0030 Nicotiana tabacum HOM05D003272 ORTHO05D003776 2.2e-83 313.5 211 74.9
SGA_v2.0_scaffold69G23041 Striga asiatica HOM05D003272 ORTHO05D003776 2.2e-83 313.5 207 72.9
TWI74G0429 Tripterygium wilfordii HOM05D003272 ORTHO05D003776 2.8e-83 313.2 210 75.2
Gorai.013G213300 Gossypium raimondii HOM05D003272 ORTHO05D003776 3.7e-83 312.8 217 72.8
DCAR_017040 Daucus carota HOM05D003272 ORTHO05D003776 6.3e-83 312.0 210 75.2
Lsat_1_v5_gn_2_56141 Lactuca sativa HOM05D003272 ORTHO05D003776 6.3e-83 312.0 213 72.3
Actinidia38598 Actinidia chinensis HOM05D003272 ORTHO05D003776 8.3e-83 311.6 208 74.5
Phvul.007G261300 Phaseolus vulgaris HOM05D003272 ORTHO05D003776 8.3e-83 311.6 211 73.5
Glyma.09G109000 Glycine max HOM05D003272 ORTHO05D003776 1.1e-82 311.2 210 72.4
Rhsim03G0003200 Rhododendron simsii HOM05D003272 ORTHO05D003776 1.1e-82 311.2 217 71.9
Eucgr.K01852 Eucalyptus grandis HOM05D003272 ORTHO05D003776 1.4e-82 310.8 210 73.3
Lalb_Chr18g0048041 Lupinus albus HOM05D003272 ORTHO05D003776 1.8e-82 310.5 210 73.3
MSTRG.6497 Avicennia marina HOM05D003272 ORTHO05D003776 2.4e-82 310.1 207 72.5
TAR623G1173 Trochodendron aralioides HOM05D003272 ORTHO05D003776 2.4e-82 310.1 211 73.0
VMungo0720G0611 Vigna mungo HOM05D003272 ORTHO05D003776 2.4e-82 310.1 211 73.5
Medtr7g093630 Medicago truncatula HOM05D003272 ORTHO05D003776 4.1e-82 309.3 213 71.8
PGR142G2098 Punica granatum HOM05D003272 ORTHO05D003776 4.1e-82 309.3 211 72.5
Gohir.A01G137100 Gossypium hirsutum HOM05D003272 ORTHO05D003776 5.4e-82 308.9 217 73.3
Nitab4.5_0000009g0220 Nicotiana tabacum HOM05D003272 ORTHO05D003776 7.0e-82 308.5 211 73.9
vmacro22121 Vaccinium macrocarpon HOM05D003272 ORTHO05D003776 7.0e-82 308.5 211 72.5
Nn2g15739 Nelumbo nucifera HOM05D003272 ORTHO05D003776 9.1e-82 308.1 212 72.2
Sed0015373 Sechium edule HOM05D003272 ORTHO05D003776 9.1e-82 308.1 210 73.3
Psat3g067560 Pisum sativum HOM05D003272 ORTHO05D003776 1.6e-81 307.4 210 71.9
Sc13g0002400 Simmondsia chinensis HOM05D003272 ORTHO05D003776 1.6e-81 307.4 209 72.2
Actinidia17288 Actinidia chinensis HOM05D003272 ORTHO05D003776 2.7e-81 306.6 208 73.6
ATR0598G091 Amborella trichopoda HOM05D003272 ORTHO05D003776 2.7e-81 306.6 210 71.0
Dinv24041 Davidia involucrata HOM05D003272 ORTHO05D003776 3.5e-81 306.2 210 71.9
Actinidia22066 Actinidia chinensis HOM05D003272 ORTHO05D003776 1.7e-80 303.9 210 71.9
CAN.G960.20 Capsicum annuum HOM05D003272 ORTHO05D003776 2.3e-80 303.5 210 71.4
Nn7g35964 Nelumbo nucifera HOM05D003272 ORTHO05D003776 2.3e-80 303.5 211 70.1
Solyc10g079010.3 Solanum lycopersicum HOM05D003272 ORTHO05D003776 2.3e-80 303.5 210 71.0
Sopen10g029630 Solanum pennellii HOM05D003272 ORTHO05D003776 2.3e-80 303.5 210 71.0
HanXRQChr14g0443181 Helianthus annuus HOM05D003272 ORTHO05D003776 3.8e-80 302.8 213 71.4
Aqoxy2G00092 Aquilegia oxysepala HOM05D003272 ORTHO05D003776 6.6e-80 302.0 219 69.4
ECA248G2064 Erigeron canadensis HOM05D003272 ORTHO05D003776 6.6e-80 302.0 209 71.8
MSTRG.19926 Avicennia marina HOM05D003272 ORTHO05D003776 1.1e-79 301.2 207 72.5
Sed0015981 Sechium edule HOM05D003272 ORTHO05D003776 3.3e-79 299.7 210 72.4
Nitab4.5_0000358g0060 Nicotiana tabacum HOM05D003272 ORTHO05D003776 4.2e-79 299.3 210 71.0
Migut.J01867 Erythranthe guttata HOM05D003272 ORTHO05D003776 5.5e-79 298.9 208 70.2
Lj1C1133T6 Lonicera japonica HOM05D003272 ORTHO05D003776 7.2e-79 298.5 210 70.5
Peaxi162Scf00003g00473 Petunia axillaris HOM05D003272 ORTHO05D003776 7.2e-79 298.5 210 70.5
MD12G1054800 Malus domestica HOM05D003272 ORTHO05D003776 6.1e-78 295.4 182 79.1
MBI19_g17426_MAGBIO Magnolia biondii HOM05D003272 ORTHO05D003776 1.0e-77 294.7 211 70.1
SalBow1G7043 Salvia bowleyana HOM05D003272 ORTHO05D003776 1.0e-77 294.7 207 68.1
Prupe.7G081000 Prunus persica HOM05D003272 ORTHO05D003776 1.4e-77 294.3 182 79.1
Sp4g24230 Schrenkiella parvula HOM05D003272 ORTHO05D003776 2.2e-75 287.0 209 68.9
Oeu046727.1 Olea europaea HOM05D003272 ORTHO05D003776 2.4e-74 283.5 212 68.4
Aa31LG1G24170 Aethionema arabicum HOM05D003272 ORTHO05D003776 4.1e-74 282.7 214 67.8
Ca_12034_v3 Cicer arietinum L. HOM05D003272 ORTHO05D003776 4.1e-74 282.7 185 75.7
PSO384G2805 Papaver somniferum HOM05D003272 ORTHO05D003776 2.7e-73 280.0 211 66.8
PSO339G1267 Papaver somniferum HOM05D003272 ORTHO05D003776 3.5e-73 279.6 211 66.8
CARHR137060 Cardamine hirsuta HOM05D003272 ORTHO05D003776 5.9e-73 278.9 210 66.2
Thhalv10016156m.g Eutrema salsugineum HOM05D003272 ORTHO05D003776 1.7e-72 277.3 211 66.4
Lj5g0000225 Lotus japonicus HOM05D003272 ORTHO05D003776 2.9e-72 276.6 208 68.3
SEGI_10284 Sequoiadendron giganteum HOM05D003272 ORTHO05D003776 1.5e-71 274.2 210 65.7
Zm00001eb009880 Zea mays HOM05D003272 ORTHO05D003776 1.9e-71 273.9 207 65.2
Zm00001eb025760 Zea mays HOM05D003272 ORTHO05D003776 1.2e-70 271.2 207 64.7
Ah.13g075660 Amaranthus hybridus HOM05D003272 ORTHO05D003776 1.6e-70 270.8 211 65.9
Zm00001eb399270 Zea mays HOM05D003272 ORTHO05D003776 8.0e-70 268.5 207 64.7
AL4G40320 Arabidopsis lyrata HOM05D003272 ORTHO05D003776 2.0e-68 263.8 208 62.5
SMO137G0342 Selaginella moellendorffii HOM05D003272 ORTHO05D003776 2.9e-67 260.0 212 61.3
Mapoly0087s0049 Marchantia polymorpha HOM05D003272 ORTHO05D003776 6.4e-67 258.8 211 62.6
Gohir.D01G133800 Gossypium hirsutum HOM05D003272 ORTHO05D003776 4.1e-66 256.1 221 63.3
Pp3c16_15960 Physcomitrium patens HOM05D003272 ORTHO05D003776 4.1e-66 256.1 212 61.8
Carub.0004s2429 Capsella rubella HOM05D003272 ORTHO05D003776 7.0e-66 255.4 212 62.3
AT2G41960 Arabidopsis thaliana HOM05D003272 ORTHO05D003776 1.2e-65 254.6 207 60.9
Pp3c6_26480 Physcomitrium patens HOM05D003272 ORTHO05D003776 3.5e-65 253.1 213 60.1
Gorai.002G165500 Gossypium raimondii HOM05D003272 ORTHO05D003776 1.5e-63 247.7 221 61.5
Hma1.2p1_0116F.1_g056150 Hydrangea macrophylla HOM05D003272 ORTHO05D003776 2.5e-63 246.9 167 74.9
AagrBONN_evm.TU.Sc2ySwM_344.2034 Anthoceros agrestis HOM05D003272 ORTHO05D003776 2.8e-62 243.4 212 59.9
unitig_0.g524 Utricularia gibba HOM05D003272 ORTHO05D003776 4.7e-62 242.7 207 58.9
BcaB01g03430 Brassica carinata HOM05D003272 ORTHO05D003776 8.9e-61 238.4 209 62.7
Os10g0105400 Oryza sativa ssp. japonica HOM05D003272 ORTHO05D003776 1.2e-60 238.0 207 58.5
Thhalv10016161m.g Eutrema salsugineum HOM05D003272 ORTHO05D003776 2.6e-60 236.9 183 66.1
A03p23500 Brassica napus HOM05D003272 ORTHO05D003776 4.4e-60 236.1 208 60.6
BraA03t11566Z Brassica rapa HOM05D003272 ORTHO05D003776 4.4e-60 236.1 208 60.6
C03p28030 Brassica napus HOM05D003272 ORTHO05D003776 2.9e-59 233.4 208 60.1
BolC3t15173H Brassica oleracea HOM05D003272 ORTHO05D003776 2.9e-59 233.4 208 60.1
BcaC02g12450 Brassica carinata HOM05D003272 ORTHO05D003776 1.9e-58 230.7 207 60.4
C04p03170 Brassica napus HOM05D003272 ORTHO05D003776 1.9e-58 230.7 207 60.4
BcaC01g05316 Brassica carinata HOM05D003272 ORTHO05D003776 9.2e-58 228.4 208 58.7
CiPaw.09G028500 Carya illinoinensis HOM05D003272 ORTHO05D003776 2.7e-57 226.9 124 84.7
A05p02660 Brassica napus HOM05D003272 ORTHO05D003776 3.9e-56 223.0 207 59.4
C04p03190 Brassica napus HOM05D003272 ORTHO05D003776 1.1e-55 221.5 207 56.5
BolC4t21957H Brassica oleracea HOM05D003272 ORTHO05D003776 1.1e-55 221.5 207 56.5
A05p02670 Brassica napus HOM05D003272 ORTHO05D003776 3.3e-55 219.9 207 56.0
BcaC02g12452 Brassica carinata HOM05D003272 ORTHO05D003776 7.3e-55 218.8 207 56.0
BraA05t19259Z Brassica rapa HOM05D003272 ORTHO05D003776 1.1e-53 214.9 210 55.2
CDE06G2439 Ceratophyllum demersum HOM05D003272 ORTHO05D003776 1.8e-53 214.2 207 53.6
DCAR_019863 Daucus carota HOM05D003272 ORTHO05D003776 1.1e-50 204.9 207 52.2
Gohir.D04G097200 Gossypium hirsutum HOM05D003272 ORTHO05D003776 1.3e-40 171.4 94 87.2
DCAR_019864 Daucus carota HOM05D003272 ORTHO05D003776 3.9e-40 169.9 207 46.9
Gohir.A09G128750 Gossypium hirsutum HOM05D003272 ORTHO05D003776 7.3e-39 165.6 136 65.4
Zm00001eb224410 Zea mays HOM05D003272 ORTHO05D003776 3.6e-38 163.3 106 72.6
DCAR_019865 Daucus carota HOM05D003272 ORTHO05D003776 6.2e-38 162.5 244 41.4
Gorai.006G143700 Gossypium raimondii HOM05D003272 ORTHO05D003776 3.4e-36 156.8 83 88.0
Gohir.D09G124800 Gossypium hirsutum HOM05D003272 ORTHO05D003776 2.9e-35 153.7 83 86.7
CDE07G0242 Ceratophyllum demersum HOM05D003272 ORTHO05D003776 7.3e-31 139.0 175 48.0
HPP92_020307 Vanilla planifolia HOM05D003272 ORTHO05D003776 6.0e-17 92.8 153 36.6
TAR369G0389 Trochodendron aralioides HOM05D003272 ORTHO05D003776 2.8e-14 84.0 58 65.5
Cre02.g087200 Chlamydomonas reinhardtii HOM05D003272 ORTHO05D003776 7.9e-09 65.9 208 26.9
Nn3g17087 Nelumbo nucifera HOM05D003272 ORTHO05D003776 1.8e-08 64.7 81 46.9
SHI22769 Sapria himalayana HOM05D004573 ORTHO05D005764 1.5e-07 61.6 32 93.8


User provided reference genes

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