Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 4.7e-302 1040.4 536 100.0
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 2.1e-116 423.7 536 48.1
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 2.6e-114 416.8 506 50.6
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 3.4e-114 416.4 528 49.6
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 1.1e-112 411.4 526 49.2
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 1.4e-112 411.0 521 48.9
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 9.1e-112 408.3 519 48.9
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 2.0e-111 407.1 524 49.6
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 3.5e-111 406.4 488 50.6
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 7.7e-111 405.2 527 47.6
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 1.7e-110 404.1 523 48.9
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 3.8e-110 402.9 539 47.3
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 3.8e-110 402.9 540 46.5
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 3.8e-110 402.9 543 47.3
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 3.8e-110 402.9 536 48.1
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 3.8e-110 402.9 513 48.9
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 5.0e-110 402.5 508 49.6
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.5e-109 400.2 521 48.8
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 4.2e-109 399.4 530 46.6
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 9.5e-109 398.3 524 47.3
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 9.5e-109 398.3 527 47.1
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 2.1e-108 397.1 535 46.9
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 6.1e-108 395.6 527 46.5
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 8.0e-108 395.2 527 46.7
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 4.0e-107 392.9 470 50.4
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 4.0e-107 392.9 492 49.4
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 6.8e-107 392.1 532 44.4
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.6e-106 390.2 565 43.9
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 3.4e-106 389.8 518 47.5
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 1.3e-105 387.9 536 45.9
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 1.1e-104 384.8 527 45.2
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 1.4e-104 384.4 517 47.0
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 3.1e-104 383.3 501 46.1
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 1.6e-103 380.9 461 47.7
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 3.5e-103 379.8 522 46.2
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 5.9e-103 379.0 528 44.7
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 1.3e-102 377.9 540 45.7
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 2.3e-102 377.1 521 45.5
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 2.3e-102 377.1 514 45.9
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 3.8e-102 376.3 490 45.9
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 6.6e-102 375.6 529 44.4
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 6.6e-102 375.6 526 46.2
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 8.6e-102 375.2 521 45.1
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 1.5e-101 374.4 517 46.4
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 1.9e-101 374.0 496 44.8
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 1.9e-101 374.0 482 46.9
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 2.5e-101 373.6 519 45.1
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 5.6e-101 372.5 529 45.0
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 9.5e-101 371.7 497 45.7
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 2.8e-100 370.2 519 45.7
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 1.0e-99 368.2 494 48.4
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 4.0e-99 366.3 549 43.5
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 8.9e-99 365.2 510 45.3
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 2.0e-98 364.0 519 45.1
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 3.4e-98 363.2 486 45.7
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 1.7e-97 360.9 486 46.1
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 3.7e-97 359.8 551 45.2
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 3.7e-97 359.8 505 45.0
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 1.1e-96 358.2 521 44.0
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 3.2e-96 356.7 513 44.2
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 4.1e-96 356.3 494 43.1
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 9.2e-96 355.1 567 42.7
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 9.2e-96 355.1 498 44.4
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 1.6e-95 354.4 554 42.4
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 2.7e-95 353.6 488 45.1
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 2.3e-94 350.5 484 45.9
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 3.9e-94 349.7 496 45.6
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 3.9e-94 349.7 488 44.7
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 6.6e-94 349.0 531 43.1
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 1.9e-93 347.4 483 44.1
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 2.5e-93 347.1 488 44.1
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 2.5e-93 347.1 533 42.6
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 3.3e-93 346.7 534 44.2
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 7.3e-93 345.5 490 44.3
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.6e-92 344.4 532 42.7
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 2.1e-92 344.0 491 45.2
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 5.2e-91 339.3 531 42.9
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 5.2e-91 339.3 538 41.8
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 1.5e-90 337.8 531 42.7
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 1.5e-90 337.8 469 44.8
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 2.0e-90 337.4 529 42.5
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 5.8e-90 335.9 537 42.5
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 7.5e-90 335.5 544 41.5
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 4.9e-89 332.8 557 41.3
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 1.9e-88 330.9 483 43.1
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 2.4e-88 330.5 465 44.7
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 9.2e-88 328.6 527 43.3
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 9.2e-88 328.6 537 41.2
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 8.6e-86 322.0 498 41.8
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 1.5e-85 321.2 470 43.0
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 3.3e-85 320.1 459 45.3
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 4.0e-83 313.2 486 40.5
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 5.8e-82 309.3 480 41.5
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.4e-80 304.7 458 41.5
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.3e-78 298.1 464 43.1
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.3e-78 298.1 464 43.1
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.3e-78 298.1 464 43.1
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 3.2e-72 276.9 366 48.6
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 3.2e-72 276.9 366 48.6
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 7.8e-71 272.3 461 41.6
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 1.3e-70 271.6 496 37.7
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 9.0e-67 258.8 503 34.4
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 4.9e-65 253.1 473 36.8
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 1.9e-61 241.1 536 34.1
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 5.6e-61 239.6 458 34.9
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.6e-60 238.0 379 45.1
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 6.2e-60 236.1 591 30.3
Cpa.g.c40176 Carica papaya HOM05D004031 ORTHO05D006678 4.3e-53 213.4 218 54.6
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 1.5e-50 204.9 350 41.4
TAR623G0223 Trochodendron aralioides HOM05D004031 ORTHO05D006678 7.9e-47 192.6 166 58.4
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 9.0e-43 179.1 220 50.0
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 5.5e-40 169.9 375 35.5
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.1e-37 162.2 224 45.5
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 1.9e-29 134.8 164 49.4
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.6e-26 124.4 112 59.8
BcaB06g25555 Brassica carinata HOM05D004031 ORTHO05D006678 9.7e-21 105.9 94 55.3
Aa31LG3G5510 Aethionema arabicum HOM05D004031 ORTHO05D006678 4.8e-20 103.6 83 59.0
CBR_g32657 Chara braunii HOM05D004031 ORTHO05D006678 2.0e-18 98.2 283 27.2
CBR_g32659 Chara braunii HOM05D001409 ORTHO05D001511 1.0e-14 85.9 149 34.9


User provided reference genes

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