Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31745 Sapria himalayana HOM05D004031 ORTHO05D006678 9.5e-118 426.8 205 100.0
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 1.9e-54 216.5 143 69.2
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 2.8e-53 212.6 143 68.5
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 1.4e-52 210.3 140 68.6
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 2.4e-52 209.5 143 67.1
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 6.9e-52 208.0 143 68.5
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 7.7e-51 204.5 143 67.1
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 1.0e-50 204.1 140 67.9
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 1.4e-49 200.3 143 65.7
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 2.5e-49 199.5 143 62.9
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 3.2e-49 199.1 143 64.3
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 3.2e-49 199.1 140 66.4
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 5.5e-49 198.4 143 62.2
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 7.2e-49 198.0 140 67.1
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 7.2e-49 198.0 140 67.1
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 9.4e-49 197.6 143 64.3
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 1.6e-48 196.8 143 62.9
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 2.1e-48 196.4 143 65.0
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.1e-48 196.4 143 64.3
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 2.7e-48 196.1 143 63.6
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 2.7e-48 196.1 143 63.6
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 4.6e-48 195.3 143 63.6
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 4.6e-48 195.3 143 63.6
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 4.6e-48 195.3 143 63.6
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 6.1e-48 194.9 143 63.6
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 7.9e-48 194.5 143 60.8
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 7.9e-48 194.5 143 63.6
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 7.9e-48 194.5 143 64.3
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 1.0e-47 194.1 140 64.3
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.4e-47 193.7 140 62.9
CSS0030127 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 1.4e-47 193.7 143 60.8
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.4e-47 193.7 143 62.2
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 5.1e-47 191.8 143 62.9
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 6.7e-47 191.4 140 65.0
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 8.8e-47 191.0 143 62.2
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 2.0e-46 189.9 143 62.9
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 2.6e-46 189.5 143 61.5
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.6e-46 189.5 140 63.6
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 2.6e-46 189.5 143 62.9
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 3.3e-46 189.1 143 61.5
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 4.4e-46 188.7 143 60.1
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 4.4e-46 188.7 143 61.5
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 7.4e-46 188.0 143 62.2
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 9.7e-46 187.6 143 60.1
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 9.7e-46 187.6 143 63.6
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 9.7e-46 187.6 143 64.3
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 1.3e-45 187.2 143 60.1
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.3e-45 187.2 143 60.1
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 1.3e-45 187.2 143 60.1
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 1.7e-45 186.8 143 59.4
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 1.7e-45 186.8 143 63.6
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 2.2e-45 186.4 142 62.7
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 2.8e-45 186.0 143 60.1
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 8.2e-45 184.5 143 60.1
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 8.2e-45 184.5 139 61.9
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 8.2e-45 184.5 138 59.4
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 1.8e-44 183.3 132 62.1
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 2.4e-44 183.0 143 60.1
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 6.9e-44 181.4 138 59.4
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 1.2e-43 180.6 140 60.0
Peaxi162Scf00463g00519 Petunia axillaris HOM05D004031 ORTHO05D006678 1.2e-43 180.6 142 58.5
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 1.2e-43 180.6 138 60.1
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 1.5e-43 180.3 140 59.3
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 1.5e-43 180.3 141 62.4
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 4.5e-43 178.7 143 58.7
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 7.7e-43 177.9 143 58.0
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 1.0e-42 177.6 138 60.9
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 1.0e-42 177.6 143 54.5
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 1.7e-42 176.8 131 59.5
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 2.2e-42 176.4 143 57.3
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 2.2e-42 176.4 143 58.7
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 2.9e-42 176.0 143 57.3
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 3.8e-42 175.6 131 60.3
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 8.5e-42 174.5 131 58.8
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 1.1e-41 174.1 143 55.2
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 1.9e-41 173.3 126 59.5
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 2.5e-41 172.9 143 56.6
Solyc03g053000.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 2.5e-41 172.9 142 57.0
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 2.5e-41 172.9 143 56.6
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 3.2e-41 172.6 130 60.0
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 5.5e-41 171.8 140 58.6
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 7.2e-41 171.4 135 57.8
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 2.7e-40 169.5 140 55.7
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 4.7e-40 168.7 143 54.5
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 1.8e-39 166.8 131 58.0
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.3e-39 166.4 138 54.3
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 3.0e-39 166.0 143 52.4
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 8.8e-39 164.5 143 54.5
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 8.8e-39 164.5 143 54.5
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 8.8e-39 164.5 143 52.4
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 3.3e-38 162.5 143 53.8
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 4.4e-38 162.2 143 53.1
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 5.7e-38 161.8 126 56.3
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 1.7e-37 160.2 138 52.9
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 1.7e-37 160.2 144 53.5
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 6.3e-37 158.3 138 52.9
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 8.2e-37 157.9 136 50.7
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 1.8e-36 156.8 138 52.2
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 4.1e-36 155.6 131 50.4
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.2e-35 154.1 152 50.0
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.2e-35 154.1 152 50.0
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.2e-35 154.1 152 50.0
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 2.9e-34 149.4 140 52.1
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 4.2e-33 145.6 122 56.6
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 2.3e-31 139.8 141 46.8
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 4.4e-30 135.6 144 46.5
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 4.4e-30 135.6 136 47.1
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 9.7e-30 134.4 143 50.3
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 1.9e-25 120.2 143 41.3
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 5.5e-25 118.6 120 50.8
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 5.5e-25 118.6 103 54.4
CBR_g44463 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-24 115.5 124 44.4
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 1.2e-19 100.9 87 51.7
C05p55850 Brassica napus HOM05D004031 ORTHO05D006678 4.5e-19 99.0 105 45.7
BolC5t34254H Brassica oleracea HOM05D004031 ORTHO05D006678 3.8e-18 95.9 88 46.6
Hund07844 Selenicereus undatus HOM05D004031 ORTHO05D006678 2.8e-08 63.2 65 49.2


User provided reference genes

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