Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31712 Sapria himalayana HOM05D000219 ORTHO05D366583 6.8e-102 374.0 190 100.0
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 6.1e-10 68.6 46 65.2
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 8.8e-09 64.7 38 68.4
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 1.1e-08 64.3 38 71.1
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 1.5e-08 63.9 49 59.2
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 2.0e-08 63.5 38 68.4
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 2.6e-08 63.2 44 59.1
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 2.6e-08 63.2 38 71.1
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 2.6e-08 63.2 52 53.8
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.6e-08 63.2 38 71.1
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 2.6e-08 63.2 39 64.1
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 3.3e-08 62.8 38 65.8
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 3.3e-08 62.8 38 68.4
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 4.4e-08 62.4 38 68.4
SHI43211 Sapria himalayana HOM05D004990 ORTHO05D000022 4.4e-08 62.4 43 74.4
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 4.4e-08 62.4 37 70.3
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 5.7e-08 62.0 44 63.6
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 5.7e-08 62.0 38 63.2
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 7.4e-08 61.6 38 65.8
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 7.4e-08 61.6 38 68.4
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 7.4e-08 61.6 37 67.6
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 7.4e-08 61.6 38 68.4
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 7.4e-08 61.6 37 70.3
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 9.7e-08 61.2 42 66.7
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 9.7e-08 61.2 38 68.4
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 9.7e-08 61.2 37 67.6
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 9.7e-08 61.2 44 59.1
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 1.3e-07 60.8 37 67.6
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 1.3e-07 60.8 37 67.6
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.3e-07 60.8 44 61.4
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 1.3e-07 60.8 38 65.8
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 1.3e-07 60.8 43 58.1
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 1.3e-07 60.8 37 67.6
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 1.7e-07 60.5 40 62.5
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 1.7e-07 60.5 38 63.2
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 1.7e-07 60.5 37 73.0
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 2.8e-07 59.7 37 62.2
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 2.8e-07 59.7 43 58.1
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 2.8e-07 59.7 37 64.9
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.8e-07 59.7 37 64.9
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 2.8e-07 59.7 38 65.8
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 2.8e-07 59.7 37 64.9
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 3.7e-07 59.3 37 62.2
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 3.7e-07 59.3 43 55.8
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 3.7e-07 59.3 38 65.8
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 3.7e-07 59.3 38 65.8
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 4.8e-07 58.9 37 67.6
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 4.8e-07 58.9 37 64.9
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 4.8e-07 58.9 37 64.9
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 4.8e-07 58.9 40 62.5
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 4.8e-07 58.9 38 65.8
SHI37022 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-07 58.9 64 50.0
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 6.3e-07 58.5 37 62.2
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 6.3e-07 58.5 37 62.2
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 6.3e-07 58.5 37 67.6
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 6.3e-07 58.5 38 63.2
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 6.3e-07 58.5 38 65.8
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 8.2e-07 58.2 49 55.1
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 8.2e-07 58.2 49 55.1
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 8.2e-07 58.2 37 67.6
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 8.2e-07 58.2 71 45.1
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 8.2e-07 58.2 71 45.1
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 8.2e-07 58.2 37 67.6
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 8.2e-07 58.2 43 55.8
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 8.2e-07 58.2 37 64.9
SHI33412 Sapria himalayana HOM05D004990 ORTHO05D000022 8.2e-07 58.2 74 40.5
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 1.1e-06 57.8 37 67.6
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 1.1e-06 57.8 37 64.9
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 1.1e-06 57.8 37 64.9
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 1.1e-06 57.8 37 64.9
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 1.4e-06 57.4 37 62.2
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 1.4e-06 57.4 37 62.2
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 1.4e-06 57.4 37 62.2
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 1.4e-06 57.4 38 65.8
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.4e-06 57.4 38 65.8
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 1.8e-06 57.0 37 67.6
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 1.8e-06 57.0 37 64.9
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 1.8e-06 57.0 37 67.6
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 1.8e-06 57.0 37 67.6
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 1.8e-06 57.0 38 65.8
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 1.8e-06 57.0 37 62.2
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 2.4e-06 56.6 37 64.9
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 2.4e-06 56.6 37 64.9
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 2.4e-06 56.6 38 63.2
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 2.4e-06 56.6 37 64.9
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 3.1e-06 56.2 37 62.2
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 3.1e-06 56.2 37 62.2
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 3.1e-06 56.2 43 53.5
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 3.1e-06 56.2 37 67.6
SHI39308 Sapria himalayana HOM05D000024 ORTHO05D000007 3.1e-06 56.2 46 58.7
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 3.1e-06 56.2 37 59.5
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 3.1e-06 56.2 37 59.5
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 4.1e-06 55.8 37 64.9
SHI34727 Sapria himalayana HOM05D004990 ORTHO05D000022 4.1e-06 55.8 72 43.1
SHI41417 Sapria himalayana HOM05D000024 ORTHO05D000022 4.1e-06 55.8 46 60.9
SHI44737 Sapria himalayana HOM05D000024 ORTHO05D000007 4.1e-06 55.8 46 60.9
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 4.1e-06 55.8 37 67.6
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 5.3e-06 55.5 38 63.2
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 7.0e-06 55.1 46 58.7
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 7.0e-06 55.1 37 64.9
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 7.0e-06 55.1 38 57.9
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 7.0e-06 55.1 43 55.8
SHI15769 Sapria himalayana HOM05D004990 ORTHO05D000022 7.0e-06 55.1 45 60.0
SHI28663 Sapria himalayana HOM05D000003 ORTHO05D000004 7.0e-06 55.1 46 58.7
SHI33606 Sapria himalayana HOM05D000024 ORTHO05D000022 7.0e-06 55.1 46 60.9
HanXRQChr10g0318971 Helianthus annuus HOM05D000219 ORTHO05D004649 9.1e-06 54.7 40 60.0
SHI31615 Sapria himalayana HOM05D004990 ORTHO05D000022 9.1e-06 54.7 46 52.2


User provided reference genes

Program Settings