Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31372 Sapria himalayana HOM05D001607 ORTHO05D001893 4.7e-88 327.8 160 100.0
SHI35284 Sapria himalayana HOM05D001607 ORTHO05D001893 4.2e-28 128.6 123 59.3
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.3e-26 122.9 126 54.0
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.0e-26 122.5 126 53.2
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 5.1e-26 121.7 126 53.2
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 8.7e-26 120.9 126 52.4
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 1.1e-25 120.6 126 53.2
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 1.5e-25 120.2 128 51.6
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.9e-25 119.8 126 51.6
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 3.3e-25 119.0 128 51.6
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 4.3e-25 118.6 126 51.6
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.3e-25 118.6 128 50.0
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 7.4e-25 117.9 126 52.4
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 7.4e-25 117.9 128 50.8
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 9.6e-25 117.5 128 51.6
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 9.6e-25 117.5 128 51.6
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.3e-24 117.1 126 51.6
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 1.6e-24 116.7 125 52.0
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 1.6e-24 116.7 126 51.6
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.6e-24 116.7 126 50.8
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 1.6e-24 116.7 126 50.8
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 1.6e-24 116.7 126 50.0
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 2.1e-24 116.3 126 50.8
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.1e-24 116.3 126 51.6
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.1e-24 116.3 126 51.6
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.1e-24 116.3 126 51.6
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 2.1e-24 116.3 128 48.4
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 2.1e-24 116.3 126 51.6
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.8e-24 115.9 126 50.0
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 2.8e-24 115.9 128 49.2
SHI42886 Sapria himalayana HOM05D001607 ORTHO05D001893 2.8e-24 115.9 150 46.0
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-24 115.5 126 50.0
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-24 115.5 126 50.0
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-24 115.5 126 50.0
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 3.7e-24 115.5 128 48.4
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 3.7e-24 115.5 126 51.6
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 6.2e-24 114.8 128 48.4
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 8.1e-24 114.4 126 50.8
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 8.1e-24 114.4 126 50.8
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 8.1e-24 114.4 126 50.0
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.1e-23 114.0 126 49.2
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 1.1e-23 114.0 126 51.6
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 1.4e-23 113.6 128 50.0
SHI45003 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-23 113.6 150 45.3
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 1.4e-23 113.6 128 49.2
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 1.8e-23 113.2 126 50.0
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 1.8e-23 113.2 126 50.0
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.8e-23 113.2 126 50.0
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 2.4e-23 112.8 128 49.2
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 3.1e-23 112.5 126 48.4
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 3.1e-23 112.5 126 48.4
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 3.1e-23 112.5 126 50.0
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 4.0e-23 112.1 126 50.0
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 4.0e-23 112.1 128 48.4
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 4.0e-23 112.1 126 49.2
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 4.0e-23 112.1 126 48.4
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 4.0e-23 112.1 126 49.2
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 5.3e-23 111.7 128 48.4
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 5.3e-23 111.7 128 48.4
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 5.3e-23 111.7 126 50.0
SHI50530 Sapria himalayana HOM05D011114 ORTHO05D010610 5.3e-23 111.7 76 68.4
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 5.3e-23 111.7 126 50.0
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 6.9e-23 111.3 126 50.0
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 9.0e-23 110.9 126 49.2
Ca_05502_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 9.0e-23 110.9 128 49.2
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 9.0e-23 110.9 124 50.0
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 9.0e-23 110.9 126 48.4
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 9.0e-23 110.9 128 46.9
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 9.0e-23 110.9 126 48.4
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 9.0e-23 110.9 128 47.7
Actinidia27741 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.2e-22 110.5 126 48.4
Actinidia28326 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.2e-22 110.5 126 48.4
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.2e-22 110.5 126 48.4
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 1.2e-22 110.5 126 47.6
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 1.5e-22 110.2 126 48.4
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.5e-22 110.2 126 49.2
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.5e-22 110.2 126 48.4
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 1.5e-22 110.2 124 50.0
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 2.0e-22 109.8 126 47.6
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 2.0e-22 109.8 126 50.0
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 2.0e-22 109.8 126 48.4
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 2.0e-22 109.8 128 49.2
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 2.0e-22 109.8 126 49.2
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 2.6e-22 109.4 128 49.2
SHI39452 Sapria himalayana HOM05D001607 ORTHO05D001893 2.6e-22 109.4 114 52.6
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 3.4e-22 109.0 128 46.1
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 3.4e-22 109.0 126 50.8
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 4.5e-22 108.6 127 48.8
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 5.8e-22 108.2 127 48.8
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 5.8e-22 108.2 126 49.2
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 5.8e-22 108.2 126 48.4
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.8e-22 108.2 126 48.4
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.8e-22 108.2 126 48.4
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.8e-22 108.2 126 48.4
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 5.8e-22 108.2 128 48.4
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 9.9e-22 107.5 127 48.8
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 9.9e-22 107.5 126 48.4
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 1.3e-21 107.1 126 46.8
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-21 107.1 126 47.6
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-21 107.1 126 47.6
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.7e-21 106.7 126 48.4
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.7e-21 106.7 126 48.4
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 1.7e-21 106.7 126 46.8
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.2e-21 106.3 126 46.8
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 2.2e-21 106.3 127 48.0
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 2.2e-21 106.3 127 48.0
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 2.2e-21 106.3 124 48.4
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 2.9e-21 105.9 128 45.3
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 2.9e-21 105.9 126 44.4
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 2.9e-21 105.9 126 47.6
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 2.9e-21 105.9 126 45.2
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 3.8e-21 105.5 127 48.0
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 3.8e-21 105.5 128 46.9
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 3.8e-21 105.5 124 47.6
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 4.9e-21 105.1 127 48.0
BcaNung04146 Brassica carinata HOM05D001607 ORTHO05D001893 4.9e-21 105.1 127 48.0
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.9e-21 105.1 126 47.6
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.9e-21 105.1 126 47.6
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 6.4e-21 104.8 127 47.2
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 6.4e-21 104.8 127 47.2
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 6.4e-21 104.8 126 46.0
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 1.1e-20 104.0 127 47.2
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 1.1e-20 104.0 127 47.2
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 1.1e-20 104.0 128 45.3
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 1.1e-20 104.0 127 48.0
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.4e-20 103.6 126 46.8
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 1.4e-20 103.6 126 46.0
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 3.2e-20 102.4 126 46.8
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 5.5e-20 101.7 125 45.6
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 5.5e-20 101.7 125 45.6
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 5.5e-20 101.7 125 45.6
SHI50518 Sapria himalayana HOM05D001607 ORTHO05D010610 7.1e-20 101.3 72 69.4
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.2e-19 100.5 127 48.0
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 2.1e-19 99.8 129 45.7
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 2.7e-19 99.4 128 41.4
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 3.5e-19 99.0 124 42.7
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 4.6e-19 98.6 126 41.3
SHI27291 Sapria himalayana HOM05D001607 ORTHO05D001893 6.0e-19 98.2 72 68.1
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 7.9e-19 97.8 146 45.2
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 1.8e-18 96.7 128 43.8
SHI51529 Sapria himalayana HOM05D016227 ORTHO05D368786 8.7e-18 94.4 66 72.7
SHI35171 Sapria himalayana HOM05D001607 ORTHO05D010610 1.9e-17 93.2 61 73.8
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.9e-17 93.2 122 46.7
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 2.5e-17 92.8 126 42.1
SHI03257 Sapria himalayana HOM05D001607 ORTHO05D001893 7.4e-17 91.3 74 66.2
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.3e-16 90.5 126 41.3
SHI38909 Sapria himalayana HOM05D001607 ORTHO05D010610 1.1e-15 87.4 60 70.0
SHI29677 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-15 87.0 121 45.5
SHI42267 Sapria himalayana HOM05D000648 ORTHO05D001893 1.8e-15 86.7 127 43.3
SHI45657 Sapria himalayana HOM05D001607 ORTHO05D001893 5.8e-14 81.6 132 38.6
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 1.3e-13 80.5 127 40.2
SHI34196 Sapria himalayana HOM05D001607 ORTHO05D010610 1.3e-13 80.5 87 54.0
SHI46836 Sapria himalayana HOM05D011114 ORTHO05D368613 2.2e-13 79.7 41 80.5
SHI50967 Sapria himalayana HOM05D001607 ORTHO05D010610 8.4e-13 77.8 56 67.9
SHI51434 Sapria himalayana HOM05D001607 ORTHO05D010610 1.4e-12 77.0 52 69.2
SHI51824 Sapria himalayana HOM05D001607 ORTHO05D010610 1.4e-12 77.0 61 60.7
Glyma.09G137350 Glycine max HOM05D001607 ORTHO05D001893 5.5e-12 75.1 49 65.3
Cre16.g675350 Chlamydomonas reinhardtii HOM05D001607 ORTHO05D001893 9.3e-12 74.3 125 37.6
SHI49988 Sapria himalayana HOM05D001607 ORTHO05D010610 1.2e-11 73.9 59 61.0
SHI51575 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-11 73.9 54 64.8
SHI28639 Sapria himalayana HOM05D011114 ORTHO05D366655 1.6e-11 73.6 75 56.0
SHI07622 Sapria himalayana HOM05D001607 ORTHO05D001893 2.1e-11 73.2 133 38.3
SHI51481 Sapria himalayana HOM05D001607 ORTHO05D010610 2.7e-11 72.8 56 64.3
SHI51257 Sapria himalayana HOM05D001607 ORTHO05D010610 3.5e-11 72.4 56 64.3
SHI51416 Sapria himalayana HOM05D016227 ORTHO05D010610 4.6e-11 72.0 42 76.2
SHI50598 Sapria himalayana HOM05D001607 ORTHO05D010610 3.0e-10 69.3 50 66.0
SHI53240 Sapria himalayana HOM05D001607 ORTHO05D010610 5.1e-10 68.6 56 60.7
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 6.7e-10 68.2 96 43.8
SHI51363 Sapria himalayana HOM05D001607 ORTHO05D010610 6.7e-10 68.2 56 62.5
SHI52001 Sapria himalayana HOM05D001607 ORTHO05D010610 6.7e-10 68.2 56 62.5
SHI27269 Sapria himalayana HOM05D016227 ORTHO05D367572 7.4e-09 64.7 46 63.0
SHI51502 Sapria himalayana HOM05D001607 ORTHO05D010610 7.4e-09 64.7 55 56.4
SHI51493 Sapria himalayana HOM05D001607 ORTHO05D001893 2.2e-08 63.2 50 64.0
SHI50834 Sapria himalayana HOM05D001607 ORTHO05D010610 1.8e-07 60.1 53 56.6
SHI17152 Sapria himalayana HOM05D016227 ORTHO05D369561 6.9e-07 58.2 48 62.5
SHI12973 Sapria himalayana HOM05D001607 ORTHO05D001893 9.0e-07 57.8 32 81.2
SHI50996 Sapria himalayana HOM05D001607 ORTHO05D010610 9.0e-07 57.8 53 56.6
SHI51100 Sapria himalayana HOM05D001607 ORTHO05D010610 9.0e-07 57.8 50 60.0
SHI47040 Sapria himalayana HOM05D001607 ORTHO05D010610 1.5e-06 57.0 50 58.0
SHI51475 Sapria himalayana HOM05D001607 ORTHO05D001893 2.6e-06 56.2 112 34.8
SHI51516 Sapria himalayana HOM05D001607 ORTHO05D001893 4.5e-06 55.5 53 52.8
SHI51566 Sapria himalayana HOM05D001607 ORTHO05D001893 4.5e-06 55.5 82 40.2
SHI47121 Sapria himalayana HOM05D001607 ORTHO05D010610 7.7e-06 54.7 50 56.0
SHI54432 Sapria himalayana HOM05D011114 ORTHO05D364313 1.0e-05 54.3 29 79.3


User provided reference genes

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