Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31300 Sapria himalayana HOM05D000764 ORTHO05D004953 6.8e-43 176.8 82 100.0
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.5e-21 105.9 57 82.5
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 4.3e-21 104.4 68 72.1
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 5.6e-21 104.0 53 88.7
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 5.6e-21 104.0 68 70.6
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 4.8e-20 100.9 68 69.1
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 4.8e-20 100.9 68 67.6
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 1.1e-19 99.8 68 67.6
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 1.1e-19 99.8 68 67.6
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 1.1e-19 99.8 68 67.6
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 1.1e-19 99.8 68 67.6
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 1.1e-19 99.8 68 67.6
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 1.4e-19 99.4 64 70.3
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 1.8e-19 99.0 68 67.6
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 2.4e-19 98.6 68 66.2
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 2.4e-19 98.6 68 67.6
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 2.4e-19 98.6 57 75.4
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 3.1e-19 98.2 68 64.7
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 3.1e-19 98.2 68 66.2
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 4.0e-19 97.8 68 66.2
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 4.0e-19 97.8 68 64.7
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 4.0e-19 97.8 68 67.6
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 4.0e-19 97.8 72 66.7
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 5.3e-19 97.4 68 66.2
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 6.9e-19 97.1 68 66.2
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 6.9e-19 97.1 57 75.4
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 9.0e-19 96.7 57 75.4
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 9.0e-19 96.7 68 66.2
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 9.0e-19 96.7 68 64.7
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 1.2e-18 96.3 68 66.2
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 1.2e-18 96.3 68 66.2
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 1.2e-18 96.3 68 66.2
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 1.2e-18 96.3 57 75.4
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 1.5e-18 95.9 82 58.5
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 1.5e-18 95.9 68 64.7
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 2.0e-18 95.5 68 64.7
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 2.0e-18 95.5 64 68.8
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 2.0e-18 95.5 68 66.2
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 2.6e-18 95.1 64 68.8
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 2.6e-18 95.1 68 64.7
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 2.6e-18 95.1 64 68.8
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 3.4e-18 94.7 57 71.9
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 3.4e-18 94.7 57 73.7
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 3.4e-18 94.7 68 64.7
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 3.4e-18 94.7 67 67.2
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 3.4e-18 94.7 64 67.2
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 4.5e-18 94.4 63 68.3
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 4.5e-18 94.4 64 67.2
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 4.5e-18 94.4 77 62.3
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 5.8e-18 94.0 68 63.2
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 7.6e-18 93.6 68 64.7
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 7.6e-18 93.6 68 64.7
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 7.6e-18 93.6 65 66.2
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 1.0e-17 93.2 57 70.2
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 1.0e-17 93.2 68 63.2
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 1.0e-17 93.2 68 63.2
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 1.0e-17 93.2 57 73.7
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.0e-17 93.2 57 73.7
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.0e-17 93.2 57 73.7
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 1.0e-17 93.2 52 78.8
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 1.0e-17 93.2 52 78.8
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.0e-17 93.2 68 63.2
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.0e-17 93.2 68 63.2
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.0e-17 93.2 68 66.2
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 1.3e-17 92.8 68 64.7
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 1.7e-17 92.4 57 70.2
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 1.7e-17 92.4 57 71.9
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 1.7e-17 92.4 57 71.9
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 1.7e-17 92.4 57 71.9
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 1.7e-17 92.4 57 71.9
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 2.2e-17 92.0 68 63.2
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 2.2e-17 92.0 52 76.9
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 2.2e-17 92.0 57 71.9
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.9e-17 91.7 57 71.9
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 2.9e-17 91.7 57 70.2
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 3.8e-17 91.3 68 61.8
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 4.9e-17 90.9 69 60.9
Cpa.g.sc119.45 Carica papaya HOM05D000764 ORTHO05D004953 6.5e-17 90.5 53 79.2
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 6.5e-17 90.5 57 71.9
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 8.4e-17 90.1 68 61.8
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 8.4e-17 90.1 68 61.8
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 8.4e-17 90.1 68 61.8
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 8.4e-17 90.1 68 61.8
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 8.4e-17 90.1 57 70.2
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 8.4e-17 90.1 68 61.8
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 8.4e-17 90.1 68 61.8
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 1.1e-16 89.7 68 61.8
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 1.1e-16 89.7 68 61.8
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 1.1e-16 89.7 68 61.8
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.1e-16 89.7 68 60.3
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 1.4e-16 89.4 68 61.8
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 1.4e-16 89.4 57 71.9
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 1.9e-16 89.0 64 65.6
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 1.9e-16 89.0 57 71.9
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 2.5e-16 88.6 68 60.3
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 3.2e-16 88.2 68 61.8
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 3.2e-16 88.2 57 70.2
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 9.3e-16 86.7 53 73.6
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 1.6e-15 85.9 57 68.4
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 2.7e-15 85.1 57 66.7
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 6.0e-15 84.0 68 55.9
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 7.9e-15 83.6 53 71.7
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 3.0e-14 81.6 53 69.8
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 1.1e-13 79.7 57 59.6
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 1.1e-13 79.7 57 59.6
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 1.5e-13 79.3 54 68.5
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 9.6e-13 76.6 57 59.6
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 1.6e-12 75.9 57 52.6
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 3.1e-11 71.6 64 54.7
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 5.3e-11 70.9 53 60.4
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 6.9e-11 70.5 64 53.1
CBR_g38308 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-10 68.6 57 52.6
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 4.2e-08 61.2 39 71.8
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 1.0e-06 56.6 38 65.8


User provided reference genes

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