Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31299 Sapria himalayana HOM05D000764 ORTHO05D004953 5.7e-77 290.8 144 100.0
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 6.4e-28 127.9 137 55.5
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 1.9e-27 126.3 135 56.3
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 1.2e-26 123.6 135 55.6
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 1.6e-26 123.2 135 55.6
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 1.3e-25 120.2 133 53.4
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 1.7e-25 119.8 140 52.9
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 3.9e-25 118.6 138 55.8
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 1.5e-24 116.7 147 50.3
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 3.3e-24 115.5 137 51.8
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 4.3e-24 115.2 140 52.1
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 8.1e-23 110.9 140 50.0
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 1.8e-22 109.8 140 49.3
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.8e-22 109.8 131 50.4
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 3.1e-22 109.0 140 49.3
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 4.0e-22 108.6 137 51.1
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 5.2e-22 108.2 137 52.6
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 6.9e-22 107.8 141 46.1
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 6.9e-22 107.8 138 50.0
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 6.9e-22 107.8 137 51.8
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 1.2e-21 107.1 141 46.8
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 1.5e-21 106.7 141 47.5
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 1.5e-21 106.7 141 46.8
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 1.5e-21 106.7 131 48.9
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.5e-21 106.7 131 48.9
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.6e-21 105.9 131 48.9
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 4.4e-21 105.1 138 48.6
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 4.4e-21 105.1 131 49.6
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 5.8e-21 104.8 140 46.4
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 7.6e-21 104.4 135 48.1
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.3e-20 103.6 137 50.4
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 1.7e-20 103.2 137 46.7
Cpa.g.sc119.45 Carica papaya HOM05D000764 ORTHO05D004953 2.2e-20 102.8 142 49.3
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 2.2e-20 102.8 137 48.2
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 2.2e-20 102.8 138 47.8
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 2.2e-20 102.8 139 46.8
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 2.9e-20 102.4 135 47.4
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 2.9e-20 102.4 141 48.2
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 6.4e-20 101.3 135 48.1
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 6.4e-20 101.3 140 48.6
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 8.4e-20 100.9 138 45.7
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 8.4e-20 100.9 132 47.0
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 2.4e-19 99.4 139 48.2
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 3.2e-19 99.0 139 48.2
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 3.2e-19 99.0 136 44.9
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 3.2e-19 99.0 136 44.9
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 5.4e-19 98.2 137 45.3
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 5.4e-19 98.2 137 45.3
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 3.5e-18 95.5 134 46.3
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 3.5e-18 95.5 133 42.9
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 4.6e-18 95.1 135 45.2
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 4.6e-18 95.1 149 44.3
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 4.6e-18 95.1 140 45.0
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 7.8e-18 94.4 131 44.3
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 1.3e-17 93.6 141 45.4
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 1.3e-17 93.6 140 43.6
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.7e-17 93.2 135 44.4
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 2.3e-17 92.8 137 44.5
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 2.3e-17 92.8 141 45.4
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 2.3e-17 92.8 140 42.9
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 5.1e-17 91.7 141 45.4
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 8.7e-17 90.9 130 46.2
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 1.1e-16 90.5 141 46.1
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 1.5e-16 90.1 136 44.1
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 1.9e-16 89.7 133 43.6
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 2.5e-16 89.4 139 42.4
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 3.3e-16 89.0 135 43.7
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 3.3e-16 89.0 126 44.4
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 4.3e-16 88.6 133 46.6
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 7.3e-16 87.8 133 44.4
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 7.3e-16 87.8 143 42.0
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 9.6e-16 87.4 127 44.9
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 9.6e-16 87.4 136 43.4
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 9.6e-16 87.4 136 43.4
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 1.6e-15 86.7 133 39.8
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 2.1e-15 86.3 128 43.0
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 2.1e-15 86.3 136 43.4
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 3.6e-15 85.5 131 42.0
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 9.0e-14 80.9 116 41.4
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 1.5e-13 80.1 126 44.4
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 9.9e-13 77.4 91 53.8
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 3.8e-12 75.5 125 42.4
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 3.8e-12 75.5 130 39.2
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 5.4e-11 71.6 122 41.8
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 6.0e-10 68.2 127 37.0
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 7.9e-10 67.8 133 36.1
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 7.9e-10 67.8 128 39.1
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 1.0e-09 67.4 127 40.2
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 1.3e-09 67.0 127 37.0
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 1.8e-09 66.6 127 37.0
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 3.9e-09 65.5 127 38.6
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 3.9e-09 65.5 127 38.6
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 5.1e-09 65.1 127 37.0
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 6.7e-09 64.7 127 38.6
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 1.1e-08 63.9 127 37.0
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 1.5e-08 63.5 127 36.2
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.5e-08 63.5 124 35.5
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 1.9e-08 63.2 124 39.5
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.9e-08 63.2 131 32.8
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 1.9e-08 63.2 132 35.6
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 2.5e-08 62.8 124 36.3
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 7.4e-08 61.2 127 37.0
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 1.3e-07 60.5 164 27.4
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 1.3e-07 60.5 164 27.4
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 1.6e-07 60.1 129 35.7
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 2.1e-07 59.7 127 36.2
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 2.1e-07 59.7 127 36.2
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 2.1e-07 59.7 127 36.2
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.8e-07 59.3 127 34.6
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 6.2e-07 58.2 127 33.9
CAN.G1237.46 Capsicum annuum HOM05D000764 ORTHO05D004953 3.1e-06 55.8 134 34.3


User provided reference genes

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