Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31298 Sapria himalayana HOM05D000764 ORTHO05D004953 9.8e-294 1012.7 498 100.0
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 1.1e-135 487.6 528 51.9
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 5.1e-133 478.8 535 51.6
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 3.1e-130 469.5 537 49.5
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 4.5e-129 465.7 535 50.7
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 1.1e-127 461.1 536 49.3
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 7.2e-127 458.4 525 49.9
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 9.3e-127 458.0 536 49.4
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.2e-126 457.6 507 52.7
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 2.7e-126 456.4 542 49.8
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 1.0e-125 454.5 536 47.8
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 5.1e-125 452.2 536 49.8
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 6.7e-125 451.8 535 49.0
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 2.5e-124 449.9 536 50.2
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 7.4e-124 448.4 536 49.1
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 1.3e-123 447.6 537 50.1
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 2.2e-123 446.8 523 49.7
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 1.4e-122 444.1 519 50.3
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 9.0e-122 441.4 523 49.7
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 1.5e-121 440.7 534 47.9
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 3.4e-121 439.5 531 49.0
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 4.5e-121 439.1 536 48.5
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 1.7e-120 437.2 536 47.6
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 1.2e-118 431.0 536 46.3
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 2.7e-118 429.9 529 47.1
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 4.6e-118 429.1 552 46.0
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 7.9e-118 428.3 529 46.9
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.8e-117 427.2 552 46.2
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 1.8e-117 427.2 504 49.0
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 2.3e-117 426.8 510 49.0
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 2.3e-117 426.8 527 48.0
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 2.3e-117 426.8 513 47.8
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 3.9e-117 426.0 504 49.0
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 8.8e-117 424.9 535 46.2
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.5e-116 424.1 552 45.5
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.5e-116 424.1 542 46.5
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 2.0e-116 423.7 504 48.6
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 5.7e-116 422.2 534 47.2
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 2.2e-115 420.2 532 47.0
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 2.4e-114 416.8 528 45.6
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 6.9e-114 415.2 535 47.3
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 1.3e-112 411.0 529 45.4
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 5.5e-111 405.6 544 47.1
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 1.2e-110 404.4 517 48.0
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 7.9e-110 401.7 490 46.7
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 2.3e-109 400.2 546 46.3
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 3.0e-109 399.8 535 45.8
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 6.7e-109 398.7 593 42.7
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 1.1e-108 397.9 562 44.5
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 9.7e-108 394.8 530 47.0
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 9.7e-108 394.8 530 46.0
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 1.3e-107 394.4 516 47.5
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 1.1e-106 391.3 494 46.8
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 1.1e-106 391.3 515 47.4
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 1.4e-106 391.0 518 46.9
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 3.1e-106 389.8 547 45.9
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 5.3e-106 389.0 539 45.3
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 7.0e-106 388.7 517 47.0
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 9.1e-106 388.3 534 47.6
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 1.2e-105 387.9 546 46.2
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 2.0e-105 387.1 516 46.7
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 3.5e-105 386.3 529 45.6
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.3e-104 384.4 554 44.9
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 3.8e-104 382.9 505 45.7
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 6.5e-104 382.1 530 44.5
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 8.5e-104 381.7 523 44.7
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 2.3e-101 373.6 520 43.7
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 1.5e-100 370.9 568 41.9
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 7.5e-100 368.6 483 46.8
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 9.7e-100 368.2 509 47.0
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 9.7e-100 368.2 494 43.9
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 1.7e-99 367.5 533 43.9
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 2.8e-99 366.7 535 43.9
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 4.8e-99 365.9 509 44.2
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 8.2e-99 365.2 479 45.5
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 1.1e-98 364.8 482 45.6
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.8e-98 364.0 496 44.8
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 9.1e-98 361.7 484 44.8
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 9.1e-98 361.7 482 46.3
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 3.5e-97 359.8 567 42.0
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 3.8e-96 356.3 506 43.7
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 1.1e-95 354.8 483 44.7
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 1.5e-95 354.4 482 45.2
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 1.5e-95 354.4 482 45.2
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.9e-95 354.0 517 43.1
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 3.2e-95 353.2 483 44.5
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 2.7e-94 350.1 488 44.9
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 8.0e-94 348.6 486 44.2
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 1.4e-93 347.8 480 44.8
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 2.3e-93 347.1 480 44.4
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 4.0e-93 346.3 501 46.3
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 9.8e-92 341.7 492 43.7
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 1.3e-91 341.3 480 44.2
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 9.1e-90 335.1 466 45.3
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 8.5e-88 328.6 449 47.0
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 7.2e-87 325.5 447 44.3
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 3.6e-86 323.2 503 43.9
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 2.0e-84 317.4 455 45.1
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 6.3e-83 312.4 509 43.2
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 9.8e-76 288.5 525 40.4
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 9.8e-76 288.5 525 40.4
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 3.7e-67 260.0 489 39.3
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 4.9e-67 259.6 358 46.1
CDE10G0477 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 6.4e-67 259.2 520 36.5
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 3.0e-64 250.4 455 37.8
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 3.3e-47 193.7 408 32.6
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 8.4e-43 179.1 554 30.3
CAN.G610.44 Capsicum annuum HOM05D000764 ORTHO05D004953 1.1e-42 178.7 291 41.2
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 1.4e-42 178.3 557 30.9
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 4.8e-38 163.3 197 50.8
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 6.2e-38 162.9 310 37.4
CAN.G1237.45 Capsicum annuum HOM05D000764 ORTHO05D004953 8.1e-38 162.5 390 34.9
CAN.G1237.21 Capsicum annuum HOM05D000764 ORTHO05D004953 1.1e-34 152.1 228 43.9
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 7.1e-34 149.4 539 30.2
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.2e-33 148.7 542 30.1
CAN.G1237.22 Capsicum annuum HOM05D000764 ORTHO05D004953 1.9e-26 124.8 83 73.5
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 1.6e-25 121.7 455 29.0
CAN.G1237.46 Capsicum annuum HOM05D000764 ORTHO05D004953 7.4e-23 112.8 87 66.7
Psat6g137480 Pisum sativum HOM05D000493 ORTHO05D004953 1.8e-21 108.2 301 31.6
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 6.5e-19 99.8 61 73.8
Oeu017835.1 Olea europaea HOM05D000764 ORTHO05D004953 1.3e-14 85.5 108 48.1
HPP92_009741 Vanilla planifolia HOM05D000764 ORTHO05D004953 6.9e-13 79.7 123 40.7
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 1.5e-12 78.6 71 47.9
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 5.5e-10 70.1 49 63.3


User provided reference genes

Program Settings