Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31294 Sapria himalayana HOM05D000764 ORTHO05D004953 1.1e-66 256.5 127 100.0
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 1.9e-23 112.8 115 54.8
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 1.2e-22 110.2 115 53.0
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 2.1e-22 109.4 115 53.9
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 1.0e-21 107.1 115 52.2
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 2.3e-21 105.9 115 49.6
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 3.9e-21 105.1 115 51.3
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 5.1e-21 104.8 115 48.7
Lj2A763G34 Lonicera japonica HOM05D000764 ORTHO05D004953 8.7e-21 104.0 117 49.6
Actinidia15647 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.1e-20 103.6 116 52.6
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 1.1e-20 103.6 115 49.6
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 1.1e-20 103.6 115 49.6
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 1.1e-20 103.6 115 51.3
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 1.5e-20 103.2 116 50.0
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 1.5e-20 103.2 121 48.8
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 1.5e-20 103.2 116 51.7
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 2.5e-20 102.4 115 49.6
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 3.3e-20 102.1 116 51.7
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 4.3e-20 101.7 115 49.6
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 4.3e-20 101.7 119 47.9
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 4.3e-20 101.7 119 47.9
COL.COLO4_07282 Corchorus olitorius HOM05D000764 ORTHO05D004953 7.4e-20 100.9 115 49.6
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 7.4e-20 100.9 111 50.5
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 9.7e-20 100.5 115 47.8
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 9.7e-20 100.5 115 48.7
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 1.3e-19 100.1 119 47.1
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 1.3e-19 100.1 115 48.7
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 2.2e-19 99.4 115 47.0
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 2.2e-19 99.4 115 47.0
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 2.2e-19 99.4 115 47.0
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 2.8e-19 99.0 116 48.3
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 2.8e-19 99.0 116 46.6
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 2.8e-19 99.0 115 48.7
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 3.7e-19 98.6 116 48.3
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 3.7e-19 98.6 116 49.1
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 3.7e-19 98.6 115 48.7
VMungo1080G1824 Vigna mungo HOM05D000764 ORTHO05D004953 4.8e-19 98.2 115 47.0
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 6.3e-19 97.8 115 47.0
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 8.2e-19 97.4 118 45.8
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 8.2e-19 97.4 118 45.8
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 8.2e-19 97.4 118 45.8
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 8.2e-19 97.4 115 47.8
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 8.2e-19 97.4 118 44.1
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 1.1e-18 97.1 115 47.8
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 1.1e-18 97.1 115 47.0
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 1.1e-18 97.1 115 50.4
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 1.1e-18 97.1 111 48.6
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 1.1e-18 97.1 115 48.7
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 1.4e-18 96.7 116 45.7
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 1.4e-18 96.7 118 44.1
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 2.4e-18 95.9 118 44.9
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 2.4e-18 95.9 118 44.9
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 2.4e-18 95.9 116 46.6
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 2.4e-18 95.9 115 47.0
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 2.4e-18 95.9 117 47.0
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 2.4e-18 95.9 118 45.8
vmacro06920 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 2.4e-18 95.9 117 49.6
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 3.1e-18 95.5 118 44.9
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 3.1e-18 95.5 116 46.6
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 4.1e-18 95.1 116 46.6
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 4.1e-18 95.1 115 46.1
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 4.1e-18 95.1 115 46.1
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 4.1e-18 95.1 115 46.1
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 4.1e-18 95.1 115 47.8
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 4.1e-18 95.1 116 47.4
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 5.3e-18 94.7 115 46.1
Hma1.2p1_0449F.1_g155100 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 5.3e-18 94.7 116 46.6
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 6.9e-18 94.4 118 44.1
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 6.9e-18 94.4 118 44.9
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 6.9e-18 94.4 111 48.6
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 9.0e-18 94.0 118 44.9
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 9.0e-18 94.0 118 44.9
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 9.0e-18 94.0 118 44.9
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 9.0e-18 94.0 118 44.9
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 9.0e-18 94.0 116 46.6
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 9.0e-18 94.0 116 46.6
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 1.2e-17 93.6 115 47.0
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 1.2e-17 93.6 115 47.0
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.2e-17 93.6 115 45.2
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 1.5e-17 93.2 115 47.8
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 2.0e-17 92.8 116 46.6
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 3.4e-17 92.0 115 47.0
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 4.5e-17 91.7 113 42.5
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 4.5e-17 91.7 111 46.8
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 7.6e-17 90.9 115 46.1
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 1.3e-16 90.1 116 45.7
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 2.2e-16 89.4 116 43.1
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 2.2e-16 89.4 116 44.8
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 2.9e-16 89.0 116 45.7
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 3.8e-16 88.6 114 45.6
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 5.0e-16 88.2 111 45.9
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 3.2e-15 85.5 107 47.7
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 5.5e-15 84.7 115 43.5
Os05g0447580 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 7.2e-15 84.3 107 46.7
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 1.4e-13 80.1 113 44.2
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 1.1e-12 77.0 104 40.4
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 1.7e-11 73.2 78 50.0
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 3.7e-11 72.0 78 50.0
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 5.3e-10 68.2 78 43.6
SEGI_19391 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 9.1e-10 67.4 107 41.1
SEGI_38078 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 9.1e-10 67.4 107 41.1
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 2.0e-09 66.2 78 44.9
CDE10G1322 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 3.4e-09 65.5 75 48.0
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 1.3e-08 63.5 64 53.1
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 2.2e-08 62.8 106 34.0
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 8.5e-08 60.8 58 53.4
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 8.5e-08 60.8 58 51.7
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.9e-07 59.7 58 51.7
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 4.2e-07 58.5 111 32.4


User provided reference genes

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