Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31115 Sapria himalayana HOM05D004479 ORTHO05D005597 4.0e-31 137.5 71 100.0
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 1.2e-11 72.8 44 81.8
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 1.6e-11 72.4 44 79.5
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 1.6e-11 72.4 44 79.5
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 1.6e-11 72.4 58 69.0
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.6e-11 72.4 44 81.8
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 2.1e-11 72.0 44 79.5
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 2.7e-11 71.6 59 61.0
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 2.7e-11 71.6 44 79.5
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 2.7e-11 71.6 44 79.5
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 2.7e-11 71.6 44 79.5
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 2.7e-11 71.6 44 79.5
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 3.5e-11 71.2 44 79.5
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 3.5e-11 71.2 44 79.5
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 3.5e-11 71.2 44 77.3
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 4.6e-11 70.9 44 79.5
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 4.6e-11 70.9 44 77.3
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 4.6e-11 70.9 44 77.3
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 4.6e-11 70.9 44 75.0
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 6.0e-11 70.5 44 77.3
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 6.0e-11 70.5 44 77.3
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 6.0e-11 70.5 44 77.3
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 6.0e-11 70.5 44 77.3
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 6.0e-11 70.5 44 75.0
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 1.0e-10 69.7 44 77.3
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 1.0e-10 69.7 44 77.3
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 1.0e-10 69.7 59 62.7
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 1.0e-10 69.7 44 75.0
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 1.0e-10 69.7 44 77.3
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 1.0e-10 69.7 46 71.7
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 1.3e-10 69.3 44 75.0
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 1.3e-10 69.3 44 75.0
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.3e-10 69.3 44 75.0
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.3e-10 69.3 44 75.0
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.3e-10 69.3 44 75.0
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 1.7e-10 68.9 44 75.0
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 2.3e-10 68.6 42 78.6
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 3.0e-10 68.2 44 75.0
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 3.0e-10 68.2 44 72.7
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 3.9e-10 67.8 44 75.0
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 3.9e-10 67.8 46 67.4
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 5.1e-10 67.4 59 61.0
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 5.1e-10 67.4 44 75.0
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 5.1e-10 67.4 59 59.3
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 5.1e-10 67.4 66 56.1
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 5.1e-10 67.4 59 61.0
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 5.1e-10 67.4 44 70.5
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 5.1e-10 67.4 44 70.5
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 5.1e-10 67.4 44 70.5
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 5.1e-10 67.4 44 77.3
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 6.6e-10 67.0 44 72.7
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 6.6e-10 67.0 43 74.4
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 8.6e-10 66.6 44 75.0
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 8.6e-10 66.6 44 75.0
C09p24010 Brassica napus HOM05D002960 ORTHO05D042139 8.6e-10 66.6 65 56.9
BolC9t55321H Brassica oleracea HOM05D002960 ORTHO05D042139 8.6e-10 66.6 65 56.9
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 8.6e-10 66.6 44 68.2
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 1.1e-09 66.2 44 70.5
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.1e-09 66.2 44 68.2
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 1.1e-09 66.2 44 68.2
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 1.1e-09 66.2 59 61.0
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 1.5e-09 65.9 43 72.1
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 1.5e-09 65.9 44 72.7
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 1.5e-09 65.9 44 68.2
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 1.5e-09 65.9 59 59.3
SHI34972 Sapria himalayana HOM05D004479 ORTHO05D005597 1.5e-09 65.9 49 69.4
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 1.5e-09 65.9 44 68.2
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 1.9e-09 65.5 44 70.5
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 1.9e-09 65.5 44 70.5
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 2.5e-09 65.1 40 75.0
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 2.5e-09 65.1 43 69.8
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 2.5e-09 65.1 44 68.2
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 3.3e-09 64.7 55 63.6
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 3.3e-09 64.7 43 74.4
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 3.3e-09 64.7 43 74.4
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 3.3e-09 64.7 43 74.4
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 3.3e-09 64.7 43 74.4
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 3.3e-09 64.7 44 70.5
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 4.3e-09 64.3 44 68.2
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 4.3e-09 64.3 44 68.2
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 4.3e-09 64.3 44 68.2
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 4.3e-09 64.3 44 68.2
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 5.6e-09 63.9 44 65.9
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 7.3e-09 63.5 44 68.2
SHI35501 Sapria himalayana HOM05D004479 ORTHO05D005597 7.3e-09 63.5 45 73.3
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 9.5e-09 63.2 59 55.9
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 9.5e-09 63.2 40 72.5
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 9.5e-09 63.2 44 68.2
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 1.2e-08 62.8 44 70.5
SHI42601 Sapria himalayana HOM05D004479 ORTHO05D005597 1.2e-08 62.8 45 73.3
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 1.6e-08 62.4 44 70.5
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 1.6e-08 62.4 44 70.5
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 1.6e-08 62.4 43 67.4
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 1.6e-08 62.4 44 63.6
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 2.1e-08 62.0 44 68.2
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 2.1e-08 62.0 44 65.9
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 3.6e-08 61.2 44 68.2
Haze_18674 Corylus avellana HOM05D004479 ORTHO05D005597 4.7e-08 60.8 39 76.9
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 4.7e-08 60.8 44 61.4
BcaC02g11491 Brassica carinata HOM05D019637 ORTHO05D018695 6.2e-08 60.5 55 63.6
C04p14790 Brassica napus HOM05D004479 ORTHO05D018695 6.2e-08 60.5 55 63.6
BolC4t23053H Brassica oleracea HOM05D004479 ORTHO05D018695 6.2e-08 60.5 55 63.6
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 1.1e-07 59.7 42 69.0
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.1e-07 59.7 42 69.0
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.1e-07 59.7 42 69.0
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 1.8e-07 58.9 44 59.1
SHI50578 Sapria himalayana HOM05D004479 ORTHO05D005597 2.4e-07 58.5 45 68.9
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 4.0e-07 57.8 44 63.6
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 4.0e-07 57.8 44 63.6
SHI49595 Sapria himalayana HOM05D004479 ORTHO05D005597 5.2e-07 57.4 44 70.5
SHI42840 Sapria himalayana HOM05D004479 ORTHO05D005597 6.8e-07 57.0 37 78.4
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 1.5e-06 55.8 36 75.0
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 3.4e-06 54.7 44 59.1
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 3.4e-06 54.7 44 59.1
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 3.4e-06 54.7 36 75.0
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 7.6e-06 53.5 43 58.1


User provided reference genes

Program Settings