Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI30769 Sapria himalayana HOM05D000030 ORTHO05D001260 1.1e-30 136.0 65 100.0
SHI24343 Sapria himalayana HOM05D000030 ORTHO05D000009 2.7e-18 94.7 59 74.6
SHI29056 Sapria himalayana HOM05D000030 ORTHO05D000009 2.3e-17 91.7 55 78.2
SHI44780 Sapria himalayana HOM05D000030 ORTHO05D000009 3.0e-17 91.3 59 71.2
SHI26545 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-16 89.0 67 65.7
Manes.01G227067 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-15 85.5 59 67.8
Manes.07G082205 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-15 85.5 59 67.8
Manes.03G079516 Manihot esculenta HOM05D000030 ORTHO05D000009 3.7e-15 84.3 59 67.8
Manes.02G209960 Manihot esculenta HOM05D000030 ORTHO05D000009 1.1e-14 82.8 60 63.3
Manes.04G059444 Manihot esculenta HOM05D000030 ORTHO05D000009 1.1e-14 82.8 56 69.6
SHI12976 Sapria himalayana HOM05D000030 ORTHO05D000009 1.4e-14 82.4 59 66.1
SHI29029 Sapria himalayana HOM05D000030 ORTHO05D000009 1.4e-14 82.4 94 50.0
SHI43157 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-14 81.3 59 64.4
Manes.07G065770 Manihot esculenta HOM05D000030 ORTHO05D000009 6.9e-14 80.1 59 61.0
SHI00709 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-13 78.6 59 67.8
SHI38917 Sapria himalayana HOM05D000030 ORTHO05D000009 2.0e-13 78.6 59 64.4
SHI09460 Sapria himalayana HOM05D000030 ORTHO05D001260 3.4e-13 77.8 59 62.7
SHI11323 Sapria himalayana HOM05D000030 ORTHO05D000009 1.7e-12 75.5 65 58.5
SHI15417 Sapria himalayana HOM05D000030 ORTHO05D000031 2.9e-12 74.7 94 48.9
Gorai.008G091400 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.8e-12 74.3 59 57.6
COL.COLO4_06793 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.1e-11 72.8 56 58.9
CSS0039788 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.5e-11 71.6 59 55.9
Duzib128G1062 Durio zibethinus HOM05D000030 ORTHO05D000009 3.2e-11 71.2 56 57.1
Duzib264G0154 Durio zibethinus HOM05D000030 ORTHO05D000009 3.2e-11 71.2 56 57.1
Hma1.2p1_0019F.1_g013840 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.2e-11 71.2 58 51.7
CSS0017519 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.2e-11 70.9 59 55.9
Duzib068G0099 Durio zibethinus HOM05D000030 ORTHO05D000009 4.2e-11 70.9 56 57.1
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 4.2e-11 70.9 56 57.1
Duzib168G1928 Durio zibethinus HOM05D000030 ORTHO05D000009 4.2e-11 70.9 56 57.1
Duzib068G0656 Durio zibethinus HOM05D000030 ORTHO05D000031 5.5e-11 70.5 56 57.1
SHI44506 Sapria himalayana HOM05D000030 ORTHO05D007344 5.5e-11 70.5 63 55.6
AUR62037105 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-11 70.1 56 57.1
Duzib205G1922 Durio zibethinus HOM05D000030 ORTHO05D000009 9.3e-11 69.7 56 57.1
CiPaw.14G061200 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.6e-10 68.9 58 51.7
Duzib127G0001 Durio zibethinus HOM05D000030 ORTHO05D000009 1.6e-10 68.9 56 55.4
Duzib268G1450 Durio zibethinus HOM05D000030 ORTHO05D000009 1.6e-10 68.9 56 55.4
Duzib205G1162 Durio zibethinus HOM05D000030 ORTHO05D000009 2.1e-10 68.6 56 55.4
Duzib187G1152 Durio zibethinus HOM05D000030 ORTHO05D000009 3.5e-10 67.8 56 55.4
SHI22022 Sapria himalayana HOM05D000030 ORTHO05D001260 3.5e-10 67.8 61 59.0
SHI44088 Sapria himalayana HOM05D000030 ORTHO05D001260 3.5e-10 67.8 61 59.0
Gorai.002G131300 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.6e-10 67.4 53 60.4
CSS0044901 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.1e-10 67.0 59 52.5
Dinv30764 Davidia involucrata HOM05D000030 ORTHO05D000009 6.1e-10 67.0 57 52.6
Duzib168G0986 Durio zibethinus HOM05D000030 ORTHO05D000009 6.1e-10 67.0 56 53.6
Duzib235G0836 Durio zibethinus HOM05D000030 ORTHO05D000009 6.1e-10 67.0 55 54.5
CSS0000197 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.9e-10 66.6 59 52.5
Rhsim03G0102300 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.9e-10 66.6 57 50.9
CiPaw.12G065500 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.0e-09 66.2 53 54.7
AUR62040545 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.0e-09 66.2 57 50.9
Duzib205G0015 Durio zibethinus HOM05D000030 ORTHO05D000009 1.0e-09 66.2 56 53.6
CSS0044432 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.3e-09 65.9 54 53.7
Hma1.2p1_0229F.1_g097020 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.8e-09 65.5 58 50.0
Rhsim05G0021400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-09 65.5 52 55.8
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 2.3e-09 65.1 56 51.8
Dinv41191 Davidia involucrata HOM05D000030 ORTHO05D000009 3.0e-09 64.7 59 49.2
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.0e-09 64.7 57 49.1
SHI28603 Sapria himalayana HOM05D000030 ORTHO05D001260 3.0e-09 64.7 50 66.0
Hma1.2p1_0594F.1_g185960 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.7e-09 63.5 58 48.3
Gohir.D01G106966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 8.7e-09 63.2 50 58.0
Nn1g08489 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.1e-08 62.8 58 48.3
Rhsim06G0089900 Rhododendron simsii HOM05D000030 ORTHO05D001260 1.5e-08 62.4 52 53.8
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-08 62.4 59 49.2
EL10Ac9g21130 Beta vulgaris HOM05D000030 ORTHO05D000031 1.9e-08 62.0 60 45.0
TWI77G0682 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 1.9e-08 62.0 58 44.8
MSTRG.1946 Avicennia marina HOM05D000030 ORTHO05D000009 4.3e-08 60.8 56 46.4
MSTRG.26881 Avicennia marina HOM05D000030 ORTHO05D000009 4.3e-08 60.8 56 46.4
Aqoxy2G01561 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 7.4e-08 60.1 51 51.0
AUR62015261 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.4e-08 60.1 53 49.1
RhsimUnG0122000 Rhododendron simsii HOM05D000045 ORTHO05D000009 7.4e-08 60.1 57 43.9
MSTRG.6053 Avicennia marina HOM05D000030 ORTHO05D000009 9.7e-08 59.7 56 46.4
Duzib264G0900 Durio zibethinus HOM05D000030 ORTHO05D000009 9.7e-08 59.7 56 51.8
Psat0s2166g0040 Pisum sativum HOM05D000030 ORTHO05D000009 9.7e-08 59.7 57 49.1
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 9.7e-08 59.7 56 46.4
TWI18G0917 Tripterygium wilfordii HOM05D000030 ORTHO05D000031 9.7e-08 59.7 58 46.6
Rhsim05G0020900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-07 59.3 55 56.4
Gorai.003G080400 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.6e-07 58.9 47 61.7
Manes.07G068232 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-07 58.9 61 42.6
SHI12218 Sapria himalayana HOM05D000030 ORTHO05D000009 1.6e-07 58.9 51 54.9
SHI32627 Sapria himalayana HOM05D000030 ORTHO05D000009 1.6e-07 58.9 55 47.3
SHI41843 Sapria himalayana HOM05D000030 ORTHO05D016252 1.6e-07 58.9 42 64.3
EL10Ac5g11270 Beta vulgaris HOM05D000030 ORTHO05D000009 2.2e-07 58.5 60 43.3
Hma1.2p1_0359F.1_g135060 Hydrangea macrophylla HOM05D000030 ORTHO05D001260 2.2e-07 58.5 59 42.4
Lj6g0002297 Lotus japonicus HOM05D000030 ORTHO05D000009 2.8e-07 58.2 59 40.7
TWI56G0896 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.8e-07 58.2 53 43.4
EL10Ac5g11471 Beta vulgaris HOM05D000030 ORTHO05D000009 3.7e-07 57.8 60 41.7
SHI01640 Sapria himalayana HOM05D005377 ORTHO05D000009 3.7e-07 57.8 54 46.3
SHI06427 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-07 57.8 54 46.3
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 3.7e-07 57.8 54 46.3
CiPaw.03G205900 Carya illinoinensis HOM05D000030 ORTHO05D000009 6.3e-07 57.0 58 43.1
CiPaw.11G027000 Carya illinoinensis HOM05D000030 ORTHO05D000009 6.3e-07 57.0 58 43.1
CiPaw.14G091800 Carya illinoinensis HOM05D000030 ORTHO05D000009 6.3e-07 57.0 58 43.1
CiPaw.15G026100 Carya illinoinensis HOM05D000030 ORTHO05D000009 6.3e-07 57.0 58 43.1
CiPaw.10G101300 Carya illinoinensis HOM05D000030 ORTHO05D000009 8.2e-07 56.6 58 43.1
SHI36327 Sapria himalayana HOM05D000030 ORTHO05D000009 8.2e-07 56.6 52 46.2
TAR528G0002 Trochodendron aralioides HOM05D000030 ORTHO05D000009 8.2e-07 56.6 53 47.2
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 1.1e-06 56.2 53 50.9
SHI06240 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-06 56.2 88 42.0
SHI13933 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-06 56.2 54 44.4
SHI31044 Sapria himalayana HOM05D000030 ORTHO05D016252 1.1e-06 56.2 40 62.5
Lj2g0014086 Lotus japonicus HOM05D000030 ORTHO05D000009 1.4e-06 55.8 59 40.7
LjContig00081g0009145 Lotus japonicus HOM05D000030 ORTHO05D000031 1.4e-06 55.8 59 40.7
Rhsim09G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-06 55.8 48 52.1
CSS0000746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.8e-06 55.5 53 50.9
Manes.09G066201 Manihot esculenta HOM05D000030 ORTHO05D000009 1.8e-06 55.5 41 65.9
SHI39150 Sapria himalayana HOM05D000030 ORTHO05D007344 1.8e-06 55.5 59 49.2
Glyma.06G265900 Glycine max HOM05D000030 ORTHO05D000009 2.4e-06 55.1 59 37.3
SHI16789 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-06 55.1 30 80.0
EL10Ac6g14271 Beta vulgaris HOM05D000030 ORTHO05D000009 3.1e-06 54.7 55 40.0
EL10As2g23188 Beta vulgaris HOM05D000030 ORTHO05D000009 3.1e-06 54.7 55 40.0
CiPaw.04G154800 Carya illinoinensis HOM05D000030 ORTHO05D000009 3.1e-06 54.7 58 41.4
AUR62029192 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.1e-06 54.7 60 38.3
Manes.06G032851 Manihot esculenta HOM05D000030 ORTHO05D000009 3.1e-06 54.7 54 44.4
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-06 54.7 30 83.3
MBI17_g39735_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 4.1e-06 54.3 53 45.3
SHI54627 Sapria himalayana HOM05D000030 ORTHO05D000009 4.1e-06 54.3 52 46.2
Cc11_g13060 Coffea canephora HOM05D000030 ORTHO05D000009 5.3e-06 53.9 55 49.1
Dinv20244 Davidia involucrata HOM05D000030 ORTHO05D000031 6.9e-06 53.5 44 54.5
MBI07_g04031_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 6.9e-06 53.5 61 37.7
SHI16798 Sapria himalayana HOM05D000030 ORTHO05D000009 6.9e-06 53.5 30 76.7
SHI21551 Sapria himalayana HOM05D000030 ORTHO05D002750 6.9e-06 53.5 53 45.3
ECA238G0867 Erigeron canadensis HOM05D000030 ORTHO05D000009 9.0e-06 53.1 57 40.4
ECA238G4412 Erigeron canadensis HOM05D000030 ORTHO05D000009 9.0e-06 53.1 57 40.4
MBI15_g40394_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D010488 9.0e-06 53.1 59 37.3
SHI29255 Sapria himalayana HOM05D000030 ORTHO05D000009 9.0e-06 53.1 59 37.3


User provided reference genes

Program Settings