Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI30098 Sapria himalayana HOM05D004564 ORTHO05D006106 2.1e-181 639.0 348 100.0
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-26 123.2 79 75.9
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 4.5e-19 99.8 71 71.8
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 5.0e-18 96.3 82 62.2
SHI11344 Sapria himalayana HOM05D001040 ORTHO05D002795 4.2e-17 93.2 108 49.1
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-16 91.3 71 67.6
SHI19218 Sapria himalayana HOM05D004875 ORTHO05D005598 4.7e-16 89.7 73 63.0
SHI36417 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-15 88.6 51 78.4
SHI27055 Sapria himalayana HOM05D004750 ORTHO05D006207 2.3e-15 87.4 51 78.4
SHI22837 Sapria himalayana HOM05D004750 ORTHO05D005598 2.6e-14 84.0 52 73.1
SHI11405 Sapria himalayana HOM05D004750 ORTHO05D005598 3.3e-14 83.6 54 74.1
SHI21104 Sapria himalayana HOM05D001130 ORTHO05D001052 1.7e-13 81.3 45 82.2
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 4.8e-13 79.7 242 31.4
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 4.8e-13 79.7 239 32.6
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 6.3e-13 79.3 240 28.3
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 6.3e-13 79.3 239 31.8
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 8.2e-13 79.0 244 32.0
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 8.2e-13 79.0 72 61.1
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 2.4e-12 77.4 225 30.2
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 4.1e-12 76.6 226 29.2
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 4.1e-12 76.6 226 30.5
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 4.1e-12 76.6 243 31.3
vmacro08737 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 5.3e-12 76.3 235 29.8
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 7.0e-12 75.9 246 28.5
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 9.1e-12 75.5 241 28.2
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 2.0e-11 74.3 247 28.3
Ciclev10030760m.g Citrus clementina HOM05D004564 ORTHO05D006106 2.0e-11 74.3 243 31.3
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 2.7e-11 73.9 239 27.6
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 3.5e-11 73.6 249 31.7
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 4.5e-11 73.2 242 28.1
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 7.7e-11 72.4 239 27.6
SHI06325 Sapria himalayana HOM05D001470 ORTHO05D006430 7.7e-11 72.4 84 57.1
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 1.0e-10 72.0 236 31.4
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 1.3e-10 71.6 239 30.1
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 1.3e-10 71.6 239 30.1
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 1.7e-10 71.2 239 27.6
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 2.2e-10 70.9 239 30.1
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 2.2e-10 70.9 239 27.2
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 2.9e-10 70.5 247 28.3
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 2.9e-10 70.5 185 30.3
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 5.0e-10 69.7 239 30.1
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 5.0e-10 69.7 239 27.2
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 5.0e-10 69.7 241 28.6
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 8.5e-10 68.9 239 28.0
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 8.5e-10 68.9 240 27.5
SHI03833 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 68.6 70 58.6
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 1.5e-09 68.2 241 29.5
arahy.Tifrunner.gnm1.ann1.UKG9X7 Arachis hypogaea HOM05D004564 ORTHO05D006106 1.9e-09 67.8 234 29.5
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 1.9e-09 67.8 257 25.7
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 2.5e-09 67.4 241 28.6
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 2.5e-09 67.4 241 30.7
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-09 67.4 45 75.6
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 4.2e-09 66.6 244 27.5
SHI02882 Sapria himalayana HOM05D000942 ORTHO05D000918 4.2e-09 66.6 77 50.6
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 5.5e-09 66.2 116 36.2
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 5.5e-09 66.2 238 26.1
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 5.5e-09 66.2 240 27.9
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 5.5e-09 66.2 238 27.3
SHI10165 Sapria himalayana HOM05D004103 ORTHO05D005242 5.5e-09 66.2 91 44.0
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 7.2e-09 65.9 241 29.9
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 7.2e-09 65.9 239 27.6
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 9.4e-09 65.5 232 27.6
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 9.4e-09 65.5 238 26.9
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 9.4e-09 65.5 239 28.0
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 1.6e-08 64.7 241 28.6
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 1.6e-08 64.7 241 27.8
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.6e-08 64.7 249 28.5
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 2.1e-08 64.3 239 28.9
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 2.1e-08 64.3 277 25.6
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 2.7e-08 63.9 222 27.5
Hma1.2p1_0539F.1_g174590 Hydrangea macrophylla HOM05D004564 ORTHO05D006106 2.7e-08 63.9 249 29.7
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 2.7e-08 63.9 240 27.5
Lj1A591G26 Lonicera japonica HOM05D004564 ORTHO05D006106 3.6e-08 63.5 163 31.9
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 3.6e-08 63.5 234 27.4
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 4.7e-08 63.2 239 26.8
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 6.1e-08 62.8 233 27.0
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 8.0e-08 62.4 242 25.6
SHI06474 Sapria himalayana HOM05D001167 ORTHO05D001054 8.0e-08 62.4 63 57.1
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 8.0e-08 62.4 245 26.5
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 8.0e-08 62.4 235 28.1
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 1.0e-07 62.0 239 25.5
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 1.0e-07 62.0 239 25.9
SHI18084 Sapria himalayana HOM05D002902 ORTHO05D008934 1.0e-07 62.0 74 52.7
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 1.4e-07 61.6 238 27.7
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 1.8e-07 61.2 250 26.0
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 1.8e-07 61.2 235 28.1
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 1.8e-07 61.2 235 27.7
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 2.3e-07 60.8 237 26.2
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 2.3e-07 60.8 37 75.7
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 2.3e-07 60.8 241 28.2
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 3.0e-07 60.5 245 29.0
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 3.0e-07 60.5 238 27.3
ATR0763G128 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.0e-07 60.1 117 32.5
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 4.0e-07 60.1 239 24.7
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 4.0e-07 60.1 246 26.8
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 4.0e-07 60.1 75 44.0
SHI04115 Sapria himalayana HOM05D000512 ORTHO05D000861 5.2e-07 59.7 45 68.9
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 5.2e-07 59.7 75 44.0
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 6.8e-07 59.3 238 29.0
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 6.8e-07 59.3 227 26.9
SHI18114 Sapria himalayana HOM05D003060 ORTHO05D001716 6.8e-07 59.3 60 55.0
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 6.8e-07 59.3 44 70.5
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 8.8e-07 58.9 240 25.4
SHI01944 Sapria himalayana HOM05D000023 ORTHO05D000014 8.8e-07 58.9 79 46.8
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 8.8e-07 58.9 58 55.2
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 1.2e-06 58.5 239 24.7
SHI03437 Sapria himalayana HOM05D004750 ORTHO05D005598 1.2e-06 58.5 41 73.2
SHI23379 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-06 58.5 60 51.7
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 1.5e-06 58.2 242 26.9
SHI26680 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 58.2 30 86.7
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 2.0e-06 57.8 243 27.2
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 2.0e-06 57.8 240 26.2
SHI02716 Sapria himalayana HOM05D001936 ORTHO05D002296 2.0e-06 57.8 70 51.4
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 2.0e-06 57.8 38 73.7
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 3.4e-06 57.0 233 24.9
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 3.4e-06 57.0 44 63.6
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 3.4e-06 57.0 60 51.7
SHI16674 Sapria himalayana HOM05D004640 ORTHO05D005489 3.4e-06 57.0 29 86.2
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 4.4e-06 56.6 234 26.5
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 4.4e-06 56.6 233 25.8
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 4.4e-06 56.6 243 27.2
Atru.chr6.2044 Acer truncatum HOM05D004564 ORTHO05D006106 7.5e-06 55.8 109 33.0
SHI08279 Sapria himalayana HOM05D004333 ORTHO05D005363 7.5e-06 55.8 41 68.3
SHI23047 Sapria himalayana HOM05D012376 ORTHO05D003975 7.5e-06 55.8 30 83.3
SHI31853 Sapria himalayana HOM05D004888 ORTHO05D005792 7.5e-06 55.8 74 47.3
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 9.8e-06 55.5 230 25.2


User provided reference genes

Program Settings