Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI30097 Sapria himalayana HOM05D004564 ORTHO05D006106 2.4e-156 555.4 276 100.0
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 1.7e-37 160.6 246 40.2
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 6.5e-37 158.7 270 38.1
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 8.5e-37 158.3 270 38.5
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 1.9e-36 157.1 270 37.8
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 1.9e-36 157.1 241 40.7
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 7.2e-36 155.2 243 39.5
Hma1.2p1_0539F.1_g174590 Hydrangea macrophylla HOM05D004564 ORTHO05D006106 1.2e-35 154.5 257 39.7
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 1.6e-35 154.1 235 40.0
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 1.6e-35 154.1 222 41.4
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 1.6e-35 154.1 243 39.1
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 2.1e-35 153.7 239 39.3
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 2.1e-35 153.7 241 39.0
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 2.7e-35 153.3 241 39.0
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 3.6e-35 152.9 224 42.4
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 4.7e-35 152.5 243 39.5
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 6.1e-35 152.1 243 39.1
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 7.9e-35 151.8 255 36.9
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 1.0e-34 151.4 272 37.5
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 1.0e-34 151.4 243 39.1
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 1.4e-34 151.0 254 38.6
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 8.8e-34 148.3 270 37.4
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 2.6e-33 146.7 222 38.7
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 3.3e-33 146.4 257 35.0
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 5.7e-33 145.6 253 37.5
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 9.7e-33 144.8 270 36.7
vmacro08737 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 1.7e-32 144.1 213 40.8
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 2.8e-32 143.3 243 36.2
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 2.8e-32 143.3 272 36.0
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 4.8e-32 142.5 273 36.3
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 4.8e-32 142.5 273 36.3
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 6.3e-32 142.1 270 36.7
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 1.4e-31 141.0 219 37.4
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 2.4e-31 140.2 225 38.7
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 2.4e-31 140.2 225 38.7
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 2.4e-31 140.2 227 38.8
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 4.1e-31 139.4 198 42.4
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 4.1e-31 139.4 222 37.4
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 4.1e-31 139.4 269 34.6
TAR626G0359 Trochodendron aralioides HOM05D004564 ORTHO05D006106 4.1e-31 139.4 199 42.2
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 5.3e-31 139.0 223 37.2
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 5.3e-31 139.0 227 37.9
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 5.3e-31 139.0 220 37.3
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 9.1e-31 138.3 269 35.7
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 1.2e-30 137.9 227 37.0
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 1.2e-30 137.9 234 36.8
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 1.5e-30 137.5 225 39.6
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 1.5e-30 137.5 222 36.5
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 1.5e-30 137.5 223 40.4
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 1.5e-30 137.5 223 40.4
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 2.0e-30 137.1 227 37.4
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 2.0e-30 137.1 227 37.4
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 2.0e-30 137.1 221 36.2
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 2.6e-30 136.7 224 37.5
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 2.6e-30 136.7 224 37.9
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 2.6e-30 136.7 256 35.9
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 2.6e-30 136.7 221 36.2
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 3.5e-30 136.3 227 37.4
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 3.5e-30 136.3 227 37.4
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 3.5e-30 136.3 224 37.5
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 3.5e-30 136.3 223 36.8
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 3.5e-30 136.3 222 36.0
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 3.5e-30 136.3 270 36.3
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 3.5e-30 136.3 221 36.2
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 4.5e-30 136.0 224 37.5
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 1.0e-29 134.8 221 35.7
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 1.7e-29 134.0 228 35.5
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 2.2e-29 133.7 227 37.0
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 2.2e-29 133.7 218 39.0
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 3.8e-29 132.9 242 36.0
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 5.0e-29 132.5 218 38.5
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 8.5e-29 131.7 270 35.2
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 1.1e-28 131.3 197 38.6
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 2.5e-28 130.2 205 39.0
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 2.5e-28 130.2 282 33.7
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 4.2e-28 129.4 230 37.4
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 5.5e-28 129.0 242 38.4
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 7.2e-28 128.6 215 36.7
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 1.6e-27 127.5 270 34.1
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 1.6e-27 127.5 219 35.2
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 2.7e-27 126.7 223 38.6
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 2.7e-27 126.7 208 37.5
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 1.4e-26 124.4 226 35.0
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 1.8e-26 124.0 280 33.6
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 5.2e-26 122.5 239 36.8
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 1.1e-25 121.3 212 37.3
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 2.2e-24 117.1 221 36.7
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 1.1e-23 114.8 224 34.8
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 1.8e-23 114.0 255 33.3
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 3.1e-23 113.2 206 36.4
arahy.Tifrunner.gnm1.ann1.UKG9X7 Arachis hypogaea HOM05D004564 ORTHO05D006106 4.1e-23 112.8 273 32.6
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 9.1e-23 111.7 254 33.1
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.2e-22 111.3 253 33.2
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 3.5e-22 109.8 228 32.9
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 2.5e-20 103.6 136 41.2
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 9.4e-20 101.7 199 34.7
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 2.1e-19 100.5 220 32.3
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 1.4e-18 97.8 213 33.3
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 6.7e-18 95.5 143 42.0
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 9.1e-15 85.1 200 32.0
HPP92_001899 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.6e-14 84.3 140 35.7
ATR0763G243 Amborella trichopoda HOM05D004564 ORTHO05D006106 2.9e-13 80.1 140 33.6
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 9.4e-12 75.1 203 29.1
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 2.7e-11 73.6 193 29.0
SHI28534 Sapria himalayana HOM05D005377 ORTHO05D003034 5.7e-09 65.9 41 73.2
Lalb_Chr10g0106561 Lupinus albus HOM05D004564 ORTHO05D006106 1.4e-07 61.2 52 55.8
SHI12102 Sapria himalayana HOM05D000105 ORTHO05D000014 1.4e-07 61.2 40 72.5
SHI37914 Sapria himalayana HOM05D000035 ORTHO05D000031 5.4e-07 59.3 38 71.1
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 7.0e-07 58.9 197 26.9
SHI01595 Sapria himalayana HOM05D005377 ORTHO05D003034 9.1e-07 58.5 41 68.3
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 2.0e-06 57.4 79 38.0
SHI29910 Sapria himalayana HOM05D000105 ORTHO05D000023 2.7e-06 57.0 37 73.0
SHI00417 Sapria himalayana HOM05D005377 ORTHO05D003034 7.7e-06 55.5 42 59.5


User provided reference genes

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