Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI30011 Sapria himalayana HOM05D014257 ORTHO05D006170 1.4e-93 346.3 171 100.0
SHI36151 Sapria himalayana HOM05D014257 ORTHO05D006170 3.3e-39 165.6 123 74.8
SHI51656 Sapria himalayana HOM05D014257 ORTHO05D006170 2.1e-33 146.4 79 91.1
SHI49537 Sapria himalayana HOM05D014257 ORTHO05D006170 3.9e-32 142.1 79 89.9
SHI29976 Sapria himalayana HOM05D014257 ORTHO05D006170 8.7e-32 141.0 107 72.9
SHI39611 Sapria himalayana HOM05D014257 ORTHO05D010276 1.7e-27 126.7 68 89.7
SHI36458 Sapria himalayana HOM05D014257 ORTHO05D365477 1.9e-26 123.2 126 55.6
SHI35750 Sapria himalayana HOM05D014257 ORTHO05D368291 1.0e-24 117.5 56 94.6
SHI39058 Sapria himalayana HOM05D014257 ORTHO05D369945 2.1e-22 109.8 71 78.9
SHI51936 Sapria himalayana HOM05D014257 ORTHO05D367911 2.9e-19 99.4 57 84.2
SHI38623 Sapria himalayana HOM05D010085 ORTHO05D011712 1.6e-14 83.6 49 87.8
SHI50515 Sapria himalayana HOM05D000219 ORTHO05D010276 2.4e-13 79.7 41 90.2
SHI52107 Sapria himalayana HOM05D000219 ORTHO05D010276 4.5e-12 75.5 41 82.9
SHI47776 Sapria himalayana HOM05D000219 ORTHO05D010276 5.8e-12 75.1 49 73.5
SHI44937 Sapria himalayana HOM05D000219 ORTHO05D010276 1.0e-11 74.3 41 80.5
SHI39844 Sapria himalayana HOM05D000219 ORTHO05D010276 2.2e-11 73.2 41 82.9
SHI52092 Sapria himalayana HOM05D000219 ORTHO05D010276 2.2e-11 73.2 41 82.9
SHI50538 Sapria himalayana HOM05D000219 ORTHO05D010276 2.9e-11 72.8 42 78.6
SHI36796 Sapria himalayana HOM05D000219 ORTHO05D010276 3.8e-11 72.4 41 82.9
SHI50092 Sapria himalayana HOM05D000219 ORTHO05D010276 3.8e-11 72.4 41 80.5
SHI51978 Sapria himalayana HOM05D000219 ORTHO05D010276 3.8e-11 72.4 49 73.5
SHI50826 Sapria himalayana HOM05D000219 ORTHO05D010276 5.0e-11 72.0 41 80.5
SHI46048 Sapria himalayana HOM05D000219 ORTHO05D010276 6.5e-11 71.6 46 73.9
SHI46806 Sapria himalayana HOM05D000219 ORTHO05D010276 6.5e-11 71.6 46 73.9
SHI48256 Sapria himalayana HOM05D000219 ORTHO05D010276 8.4e-11 71.2 43 79.1
SHI50751 Sapria himalayana HOM05D000219 ORTHO05D010276 8.4e-11 71.2 46 76.1
SHI49809 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-10 70.9 41 80.5
SHI50011 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-10 70.9 41 80.5
SHI50254 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-10 70.9 41 80.5
SHI50990 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-10 70.9 41 80.5
SHI53731 Sapria himalayana HOM05D000219 ORTHO05D010276 2.5e-10 69.7 41 78.0
SHI50787 Sapria himalayana HOM05D000219 ORTHO05D010276 3.2e-10 69.3 42 78.6
SHI51776 Sapria himalayana HOM05D000219 ORTHO05D010276 3.2e-10 69.3 42 78.6
AT5G24760 Arabidopsis thaliana HOM05D000219 ORTHO05D000226 5.5e-10 68.6 40 75.0
Sabra04G0044900 Salix brachista HOM05D000219 ORTHO05D000226 7.1e-10 68.2 44 70.5
SHI48912 Sapria himalayana HOM05D000219 ORTHO05D010276 7.1e-10 68.2 43 76.7
SHI49309 Sapria himalayana HOM05D000219 ORTHO05D010276 7.1e-10 68.2 43 76.7
SHI51293 Sapria himalayana HOM05D000219 ORTHO05D010276 7.1e-10 68.2 41 78.0
Carub.0006s2261 Capsella rubella HOM05D000219 ORTHO05D000226 9.3e-10 67.8 44 61.4
SHI54810 Sapria himalayana HOM05D000219 ORTHO05D010276 9.3e-10 67.8 41 78.0
Actinidia25675 Actinidia chinensis HOM05D000219 ORTHO05D010276 1.2e-09 67.4 44 70.5
AL6G36350 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 1.2e-09 67.4 44 65.9
SHI50432 Sapria himalayana HOM05D000219 ORTHO05D010276 1.2e-09 67.4 41 78.0
CARHR188730 Cardamine hirsuta HOM05D000219 ORTHO05D000226 1.6e-09 67.0 44 61.4
Potri.004G067000 Populus trichocarpa HOM05D000219 ORTHO05D000226 1.6e-09 67.0 40 75.0
Sp2g22670 Schrenkiella parvula HOM05D000219 ORTHO05D000226 1.6e-09 67.0 44 61.4
Thhalv10004400m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 2.1e-09 66.6 41 65.9
SHI10800 Sapria himalayana HOM05D024631 ORTHO05D006170 2.1e-09 66.6 40 80.0
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 2.7e-09 66.2 44 61.4
BolC2t12063H Brassica oleracea HOM05D000219 ORTHO05D000226 2.7e-09 66.2 44 61.4
MBI03_g13437_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 2.7e-09 66.2 57 56.1
MBI03_g44526_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 2.7e-09 66.2 57 56.1
CiPaw.15G107700 Carya illinoinensis HOM05D000219 ORTHO05D000226 3.5e-09 65.9 64 56.2
SHI46224 Sapria himalayana HOM05D000219 ORTHO05D370485 3.5e-09 65.9 41 73.2
SHI50752 Sapria himalayana HOM05D000219 ORTHO05D010276 4.6e-09 65.5 41 78.0
BcaB07g29920 Brassica carinata HOM05D000219 ORTHO05D000226 6.1e-09 65.1 44 59.1
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 6.1e-09 65.1 44 59.1
BraA02t08978Z Brassica rapa HOM05D000219 ORTHO05D000226 6.1e-09 65.1 44 59.1
CSS0027431 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D000226 6.1e-09 65.1 44 68.2
HanXRQChr12g0381231 Helianthus annuus HOM05D000219 ORTHO05D000226 6.1e-09 65.1 57 56.1
Lj2g0026377 Lotus japonicus HOM05D000219 ORTHO05D000226 6.1e-09 65.1 40 72.5
FvH4_5g18580 Fragaria vesca HOM05D000219 ORTHO05D000226 7.9e-09 64.7 44 68.2
FAN08G0809 Fragaria x ananassa HOM05D000219 ORTHO05D000226 7.9e-09 64.7 44 68.2
FAN18G2659 Fragaria x ananassa HOM05D000219 ORTHO05D000226 7.9e-09 64.7 44 68.2
Glyma.09G161600 Glycine max HOM05D000219 ORTHO05D000226 7.9e-09 64.7 40 72.5
Medtr6g068930 Medicago truncatula HOM05D000219 ORTHO05D000226 7.9e-09 64.7 40 72.5
Os02g0637700 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D000226 7.9e-09 64.7 63 55.6
Rhsim12G0137400 Rhododendron simsii HOM05D000219 ORTHO05D000226 7.9e-09 64.7 47 61.7
SHI47031 Sapria himalayana HOM05D000219 ORTHO05D010276 7.9e-09 64.7 36 83.3
TPR.G26646 Trifolium pratense HOM05D000219 ORTHO05D000226 7.9e-09 64.7 47 61.7
Zm00001eb185610 Zea mays HOM05D000219 ORTHO05D000226 1.0e-08 64.3 50 60.0
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 1.3e-08 63.9 44 59.1
ClCG01G014590 Citrullus lanatus HOM05D000219 ORTHO05D000226 1.3e-08 63.9 40 70.0
CsaV3_1G007740 Cucumis sativus L. HOM05D000219 ORTHO05D000226 1.3e-08 63.9 40 70.0
Nn3g18548 Nelumbo nucifera HOM05D000219 ORTHO05D000226 1.3e-08 63.9 54 59.3
Oeu062062.1 Olea europaea HOM05D000219 ORTHO05D000226 1.3e-08 63.9 57 54.4
PSO063G5970 Papaver somniferum HOM05D000219 ORTHO05D000226 1.8e-08 63.5 44 61.4
SalBow5G1826 Salvia bowleyana HOM05D000219 ORTHO05D000226 1.8e-08 63.5 44 63.6
MELO3C002189.2 Cucumis melo HOM05D000219 ORTHO05D000226 2.3e-08 63.2 40 67.5
ECA233G3819 Erigeron canadensis HOM05D000219 ORTHO05D000226 2.3e-08 63.2 40 65.0
Nitab4.5_0000477g0170 Nicotiana tabacum HOM05D000219 ORTHO05D000226 2.3e-08 63.2 57 56.1
Nitab4.5_0010398g0010 Nicotiana tabacum HOM05D000219 ORTHO05D000226 2.3e-08 63.2 57 56.1
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 2.3e-08 63.2 37 78.4
arahy.Tifrunner.gnm1.ann1.B2MH1M Arachis hypogaea HOM05D000219 ORTHO05D000226 3.0e-08 62.8 44 63.6
arahy.Tifrunner.gnm1.ann1.P0W1U8 Arachis hypogaea HOM05D000219 ORTHO05D000226 3.0e-08 62.8 44 63.6
Phvul.004G136700 Phaseolus vulgaris HOM05D000219 ORTHO05D000226 3.0e-08 62.8 40 70.0
SHI51431 Sapria himalayana HOM05D000219 ORTHO05D010276 3.0e-08 62.8 41 70.7
TPR.G26649 Trifolium pratense HOM05D000219 ORTHO05D010276 3.0e-08 62.8 47 57.4
VMungo0464G1361 Vigna mungo HOM05D000219 ORTHO05D000226 3.0e-08 62.8 40 70.0
RcHm_v2.0_Chr7g0176931 Rosa chinensis HOM05D000219 ORTHO05D000226 3.9e-08 62.4 44 65.9
SHI53988 Sapria himalayana HOM05D000219 ORTHO05D365004 3.9e-08 62.4 37 78.4
Solyc06g072160.3 Solanum lycopersicum HOM05D000219 ORTHO05D000226 3.9e-08 62.4 44 63.6
Sopen06g028460 Solanum pennellii HOM05D000219 ORTHO05D000226 3.9e-08 62.4 44 63.6
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 3.9e-08 62.4 44 65.9
Eucgr.K02331 Eucalyptus grandis HOM05D000219 ORTHO05D000226 5.1e-08 62.0 53 54.7
Hma1.2p1_0816F.1_g223010 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 5.1e-08 62.0 44 63.6
Hma1.2p1_0816F.1_g223020 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 5.1e-08 62.0 44 63.6
Lj5A168T98 Lonicera japonica HOM05D000219 ORTHO05D000226 5.1e-08 62.0 44 61.4
Peaxi162Scf00643g00536 Petunia axillaris HOM05D000219 ORTHO05D000226 5.1e-08 62.0 57 54.4
Prupe.5G200700 Prunus persica HOM05D000219 ORTHO05D010276 5.1e-08 62.0 40 67.5
Thecc.05G196900 Theobroma cacao HOM05D000219 ORTHO05D000226 5.1e-08 62.0 40 67.5
TPR.G31358 Trifolium pratense HOM05D000219 ORTHO05D000226 5.1e-08 62.0 40 67.5
TWI36G1688 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 5.1e-08 62.0 53 58.5
Atru.chr9.15 Acer truncatum HOM05D000219 ORTHO05D000226 6.7e-08 61.6 44 65.9
Aa31LG11G3990 Aethionema arabicum HOM05D000219 ORTHO05D000226 6.7e-08 61.6 44 59.1
CAN.G65.64 Capsicum annuum HOM05D000219 ORTHO05D000226 6.7e-08 61.6 44 61.4
PSO782G1609 Papaver somniferum HOM05D000219 ORTHO05D000226 6.7e-08 61.6 44 59.1
Prupe.6G022900 Prunus persica HOM05D000219 ORTHO05D000226 6.7e-08 61.6 40 67.5
Sed0015203 Sechium edule HOM05D000219 ORTHO05D000226 6.7e-08 61.6 41 63.4
vmacro16403 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 6.7e-08 61.6 44 65.9
Aqoxy1G01067 Aquilegia oxysepala HOM05D000219 ORTHO05D000226 8.7e-08 61.2 40 67.5
Cpa.g.sc168.2 Carica papaya HOM05D000219 ORTHO05D000226 8.7e-08 61.2 40 67.5
DCAR_023241 Daucus carota HOM05D000219 ORTHO05D000226 8.7e-08 61.2 44 54.5
SHI53277 Sapria himalayana HOM05D000219 ORTHO05D010276 8.7e-08 61.2 51 64.7
Duzib128G1276 Durio zibethinus HOM05D000219 ORTHO05D000226 1.1e-07 60.8 40 65.0
arahy.Tifrunner.gnm1.ann1.J4R23C Arachis hypogaea HOM05D000219 ORTHO05D010276 1.5e-07 60.5 44 61.4
MD06G1241000 Malus domestica HOM05D000219 ORTHO05D000226 1.5e-07 60.5 40 65.0
PGR044G1542 Punica granatum HOM05D000219 ORTHO05D000226 1.5e-07 60.5 53 56.6
Sc10g0006240 Simmondsia chinensis HOM05D000219 ORTHO05D000226 1.5e-07 60.5 48 60.4
GSVIVG01024246001 Vitis vinifera HOM05D000219 ORTHO05D000226 1.5e-07 60.5 44 61.4
ATR0124G003 Amborella trichopoda HOM05D000219 ORTHO05D000226 1.9e-07 60.1 57 52.6
Migut.O00280 Erythranthe guttata HOM05D000219 ORTHO05D000226 1.9e-07 60.1 53 58.5
Gohir.D08G245900 Gossypium hirsutum HOM05D000219 ORTHO05D000226 1.9e-07 60.1 40 65.0
Gorai.004G262400 Gossypium raimondii HOM05D000219 ORTHO05D000226 1.9e-07 60.1 40 65.0
THA.LOC104798999 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 1.9e-07 60.1 40 65.0
arahy.Tifrunner.gnm1.ann1.9I3Q6X Arachis hypogaea HOM05D000219 ORTHO05D010276 2.5e-07 59.7 45 60.0
COL.COLO4_05180 Corchorus olitorius HOM05D000219 ORTHO05D000226 3.3e-07 59.3 40 62.5
Lsat_1_v5_gn_5_65400 Lactuca sativa HOM05D000219 ORTHO05D000226 3.3e-07 59.3 44 56.8
Lalb_Chr22g0354051 Lupinus albus HOM05D000219 ORTHO05D000226 3.3e-07 59.3 53 58.5
Manes.02G226001 Manihot esculenta HOM05D000219 ORTHO05D000226 3.3e-07 59.3 40 65.0
Prupe.5G245200 Prunus persica HOM05D000219 ORTHO05D000226 3.3e-07 59.3 40 65.0
AL1G35960 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 4.3e-07 58.9 51 58.8
arahy.Tifrunner.gnm1.ann1.HKZ3DM Arachis hypogaea HOM05D000219 ORTHO05D010276 4.3e-07 58.9 44 59.1
QL08p055124 Quercus lobata HOM05D000219 ORTHO05D000226 4.3e-07 58.9 40 62.5
CANSAT35G1028 Cannabis sativa HOM05D000219 ORTHO05D000226 5.7e-07 58.5 44 59.1
FAN04G1983 Fragaria x ananassa HOM05D000219 ORTHO05D000226 5.7e-07 58.5 44 63.6
MD14G1246800 Malus domestica HOM05D000219 ORTHO05D000226 5.7e-07 58.5 40 60.0
Dinv03509 Davidia involucrata HOM05D000219 ORTHO05D000226 7.4e-07 58.2 40 62.5
SHI50564 Sapria himalayana HOM05D000219 ORTHO05D010276 7.4e-07 58.2 33 81.8
HPP92_015003 Vanilla planifolia HOM05D000219 ORTHO05D000226 7.4e-07 58.2 54 51.9
arahy.Tifrunner.gnm1.ann1.W4Q01Q Arachis hypogaea HOM05D000219 ORTHO05D010276 9.7e-07 57.8 44 56.8
arahy.Tifrunner.gnm1.ann1.DB7K0S Arachis hypogaea HOM05D000219 ORTHO05D010276 1.3e-06 57.4 44 59.1
Eucgr.K02333 Eucalyptus grandis HOM05D000219 ORTHO05D000226 1.3e-06 57.4 40 60.0
Sp1g19915 Schrenkiella parvula HOM05D000219 ORTHO05D000226 1.3e-06 57.4 51 56.9
Ciclev10020629m.g Citrus clementina HOM05D000219 ORTHO05D000226 1.6e-06 57.0 40 62.5
A07p14440 Brassica napus HOM05D000219 ORTHO05D000226 2.8e-06 56.2 51 54.9
C07p21250 Brassica napus HOM05D000219 ORTHO05D000226 2.8e-06 56.2 51 54.9
BolC7t42654H Brassica oleracea HOM05D000219 ORTHO05D000226 2.8e-06 56.2 51 54.9
BraA07t29195Z Brassica rapa HOM05D000219 ORTHO05D000226 2.8e-06 56.2 51 54.9
SHI53622 Sapria himalayana HOM05D000219 ORTHO05D010276 2.8e-06 56.2 32 81.2
arahy.Tifrunner.gnm1.ann1.JNE1E7 Arachis hypogaea HOM05D000219 ORTHO05D010276 3.7e-06 55.8 43 55.8
BcaC07g39161 Brassica carinata HOM05D000219 ORTHO05D000226 4.8e-06 55.5 46 58.7
C08p21540 Brassica napus HOM05D000219 ORTHO05D000226 4.8e-06 55.5 46 58.7
BolC8t49794H Brassica oleracea HOM05D000219 ORTHO05D000226 4.8e-06 55.5 46 58.7
MELO3C011043.2 Cucumis melo HOM05D000219 ORTHO05D000226 8.2e-06 54.7 46 54.3
Thhalv10007889m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 8.2e-06 54.7 53 50.9


User provided reference genes

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