Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI30010 Sapria himalayana HOM05D010085 ORTHO05D011712 6.1e-109 397.5 202 100.0
SHI36764 Sapria himalayana HOM05D010085 ORTHO05D011712 1.4e-76 290.0 173 85.5
SHI01586 Sapria himalayana HOM05D010085 ORTHO05D011712 1.2e-69 266.9 173 80.9
SHI35749 Sapria himalayana HOM05D010085 ORTHO05D011712 2.1e-53 213.0 134 83.6
SHI36220 Sapria himalayana HOM05D010085 ORTHO05D011712 3.1e-52 209.1 177 67.2
SHI39031 Sapria himalayana HOM05D010085 ORTHO05D011712 3.1e-52 209.1 143 79.7
SHI45896 Sapria himalayana HOM05D000222 ORTHO05D000329 5.4e-49 198.4 171 66.7
SHI49335 Sapria himalayana HOM05D010085 ORTHO05D011712 1.6e-48 196.8 172 65.1
SHI37841 Sapria himalayana HOM05D000222 ORTHO05D000329 2.7e-48 196.1 172 65.7
SHI45363 Sapria himalayana HOM05D000222 ORTHO05D000329 2.7e-48 196.1 171 66.1
SHI42404 Sapria himalayana HOM05D000222 ORTHO05D000329 1.0e-47 194.1 172 65.1
SHI43105 Sapria himalayana HOM05D000222 ORTHO05D000329 8.6e-47 191.0 172 64.0
SHI47293 Sapria himalayana HOM05D000222 ORTHO05D000329 1.5e-43 180.3 173 63.0
SHI38697 Sapria himalayana HOM05D000222 ORTHO05D000329 3.5e-40 169.1 174 58.6
SHI41830 Sapria himalayana HOM05D000222 ORTHO05D000329 2.3e-39 166.4 173 57.2
SHI29975 Sapria himalayana HOM05D000222 ORTHO05D000329 5.6e-38 161.8 157 60.5
SHI36781 Sapria himalayana HOM05D010085 ORTHO05D366321 2.8e-37 159.5 112 75.9
SHI36899 Sapria himalayana HOM05D000222 ORTHO05D000329 4.8e-37 158.7 173 54.3
SHI47294 Sapria himalayana HOM05D000222 ORTHO05D000329 6.2e-37 158.3 153 62.1
SHI38623 Sapria himalayana HOM05D010085 ORTHO05D011712 5.8e-35 151.8 171 53.2
SHI16971 Sapria himalayana HOM05D010085 ORTHO05D011712 2.9e-34 149.4 98 80.6
SHI40402 Sapria himalayana HOM05D000222 ORTHO05D000329 3.2e-33 146.0 157 56.1
SHI42103 Sapria himalayana HOM05D000222 ORTHO05D011712 4.2e-33 145.6 159 56.6
SHI50449 Sapria himalayana HOM05D000222 ORTHO05D000329 1.2e-32 144.1 179 51.4
SHI40499 Sapria himalayana HOM05D010085 ORTHO05D011712 7.8e-32 141.4 113 69.0
SHI39966 Sapria himalayana HOM05D000222 ORTHO05D011712 1.7e-31 140.2 179 50.8
SHI36492 Sapria himalayana HOM05D010085 ORTHO05D364931 4.3e-30 135.6 88 83.0
SHI08058 Sapria himalayana HOM05D000222 ORTHO05D000329 1.4e-28 130.6 184 47.8
SHI39648 Sapria himalayana HOM05D000222 ORTHO05D017108 4.5e-27 125.6 123 58.5
SHI36262 Sapria himalayana HOM05D010085 ORTHO05D370134 2.2e-26 123.2 82 79.3
SHI25750 Sapria himalayana HOM05D000222 ORTHO05D000329 6.4e-26 121.7 172 47.7
SHI38167 Sapria himalayana HOM05D000222 ORTHO05D000329 6.4e-26 121.7 199 40.7
SHI40422 Sapria himalayana HOM05D010085 ORTHO05D011712 2.4e-25 119.8 73 80.8
SHI38663 Sapria himalayana HOM05D010085 ORTHO05D011712 4.2e-25 119.0 76 77.6
SHI36261 Sapria himalayana HOM05D010085 ORTHO05D011712 4.3e-22 109.0 66 81.8
SHI36152 Sapria himalayana HOM05D010085 ORTHO05D011712 1.3e-21 107.5 82 72.0
SHI31450 Sapria himalayana HOM05D010085 ORTHO05D011712 2.1e-21 106.7 85 67.1
SHI36153 Sapria himalayana HOM05D010085 ORTHO05D366419 4.8e-21 105.5 96 60.4
SHI09977 Sapria himalayana HOM05D001607 ORTHO05D011712 3.8e-18 95.9 79 65.8
SHI39612 Sapria himalayana HOM05D010085 ORTHO05D011712 6.5e-18 95.1 173 39.9
SHI44101 Sapria himalayana HOM05D010085 ORTHO05D011712 6.5e-18 95.1 117 53.0
SHI40756 Sapria himalayana HOM05D000222 ORTHO05D011712 1.1e-14 84.3 65 69.2
SHI41291 Sapria himalayana HOM05D000222 ORTHO05D011712 1.1e-14 84.3 65 69.2
MSTRG.1183 Avicennia marina HOM05D000222 ORTHO05D000329 2.5e-14 83.2 185 35.7
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.6e-13 80.5 175 34.3
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 2.1e-13 80.1 175 34.9
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 2.1e-13 80.1 175 34.9
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 4.8e-13 79.0 166 35.5
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 6.2e-13 78.6 175 34.3
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 8.2e-13 78.2 185 34.6
Hund05159 Selenicereus undatus HOM05D000222 ORTHO05D000329 8.2e-13 78.2 166 35.5
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 1.1e-12 77.8 191 32.5
SHI50291 Sapria himalayana HOM05D001607 ORTHO05D001893 1.1e-12 77.8 81 56.8
COL.COLO4_26130 Corchorus olitorius HOM05D000222 ORTHO05D000329 1.4e-12 77.4 182 34.1
SHI47780 Sapria himalayana HOM05D001607 ORTHO05D001893 1.8e-12 77.0 74 60.8
SHI49096 Sapria himalayana HOM05D001607 ORTHO05D001893 1.8e-12 77.0 68 64.7
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 4.1e-12 75.9 160 35.6
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 4.1e-12 75.9 186 33.9
Nn6g32037 Nelumbo nucifera HOM05D000222 ORTHO05D000329 5.3e-12 75.5 156 35.3
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 5.3e-12 75.5 187 33.7
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 6.9e-12 75.1 187 34.8
Oeu046282.1 Olea europaea HOM05D000222 ORTHO05D000329 6.9e-12 75.1 160 35.0
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 9.0e-12 74.7 154 35.7
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 9.0e-12 74.7 183 32.2
TAR536G0015 Trochodendron aralioides HOM05D000222 ORTHO05D000329 9.0e-12 74.7 167 35.9
ATR0810G217 Amborella trichopoda HOM05D000222 ORTHO05D000329 1.2e-11 74.3 167 34.7
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 1.2e-11 74.3 183 32.2
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 1.2e-11 74.3 154 35.1
Nitab4.5_0003251g0080 Nicotiana tabacum HOM05D000222 ORTHO05D000329 1.2e-11 74.3 183 31.7
Peaxi162Scf00553g00114 Petunia axillaris HOM05D000222 ORTHO05D000329 1.2e-11 74.3 183 33.3
TAR381G1457 Trochodendron aralioides HOM05D000222 ORTHO05D000329 1.2e-11 74.3 156 35.9
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.0e-11 73.6 183 32.2
SHI36277 Sapria himalayana HOM05D000222 ORTHO05D000329 2.0e-11 73.6 96 46.9
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 2.6e-11 73.2 166 34.3
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 3.4e-11 72.8 183 32.2
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 3.4e-11 72.8 183 32.2
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 3.4e-11 72.8 156 34.0
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 3.4e-11 72.8 166 33.7
Lj4C22T9 Lonicera japonica HOM05D000222 ORTHO05D000329 3.4e-11 72.8 155 34.2
Manes.18G012200 Manihot esculenta HOM05D000222 ORTHO05D000329 3.4e-11 72.8 183 33.3
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 3.4e-11 72.8 187 31.6
Aqoxy152s001 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 4.5e-11 72.4 156 34.6
Aqoxy6G02232 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 4.5e-11 72.4 156 34.6
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 4.5e-11 72.4 177 31.6
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 4.5e-11 72.4 166 33.7
Aqoxy1G02465 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 5.8e-11 72.0 195 30.8
Nn5g30723 Nelumbo nucifera HOM05D000222 ORTHO05D000329 7.6e-11 71.6 183 31.7
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 1.0e-10 71.2 173 34.1
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 1.3e-10 70.9 159 34.0
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 1.3e-10 70.9 187 31.0
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 1.3e-10 70.9 154 35.1
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 1.7e-10 70.5 156 34.0
Migut.N03167 Erythranthe guttata HOM05D000222 ORTHO05D000329 1.7e-10 70.5 156 34.0
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 1.7e-10 70.5 188 29.3
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 1.7e-10 70.5 187 31.6
SHI48664 Sapria himalayana HOM05D001607 ORTHO05D001893 1.7e-10 70.5 68 61.8
Thecc.08G046300 Theobroma cacao HOM05D000222 ORTHO05D000329 2.2e-10 70.1 153 34.0
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 2.9e-10 69.7 184 32.1
MBI05_g33510_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 2.9e-10 69.7 189 31.2
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 3.8e-10 69.3 156 32.7
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 3.8e-10 69.3 160 32.5
Sc15g0004910 Simmondsia chinensis HOM05D000222 ORTHO05D000329 3.8e-10 69.3 151 35.8
PGSC0003DMG400009940 Solanum tuberosum HOM05D000222 ORTHO05D000329 3.8e-10 69.3 156 34.0
Sc02g0008650 Simmondsia chinensis HOM05D000222 ORTHO05D000329 5.0e-10 68.9 152 34.9
A03p55100 Brassica napus HOM05D000222 ORTHO05D000329 6.5e-10 68.6 197 30.5
C01p19440 Brassica napus HOM05D000222 ORTHO05D000329 6.5e-10 68.6 202 29.2
BolC1t01873H Brassica oleracea HOM05D000222 ORTHO05D000329 6.5e-10 68.6 202 29.2
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 6.5e-10 68.6 183 31.7
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 6.5e-10 68.6 184 31.5
Manes.18G012500 Manihot esculenta HOM05D000222 ORTHO05D000329 6.5e-10 68.6 151 33.8
Phvul.001G005200 Phaseolus vulgaris HOM05D000222 ORTHO05D000329 6.5e-10 68.6 155 33.5
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 6.5e-10 68.6 155 32.9
BcaC09g50898 Brassica carinata HOM05D000222 ORTHO05D000329 8.4e-10 68.2 202 29.2
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 8.4e-10 68.2 183 29.5
Prupe.1G363900 Prunus persica HOM05D000222 ORTHO05D000329 8.4e-10 68.2 153 32.7
BraA03t14570Z Brassica rapa HOM05D000222 ORTHO05D000329 1.1e-09 67.8 202 29.2
Thhalv10024414m.g Eutrema salsugineum HOM05D000222 ORTHO05D000329 1.1e-09 67.8 202 28.7
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 1.1e-09 67.8 183 29.5
vmacro04362 Vaccinium macrocarpon HOM05D000222 ORTHO05D000329 1.1e-09 67.8 179 30.2
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 1.4e-09 67.4 156 32.7
Sopen04g035180 Solanum pennellii HOM05D000222 ORTHO05D000329 1.4e-09 67.4 155 33.5
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 1.9e-09 67.0 184 30.4
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 1.9e-09 67.0 167 32.9
Peaxi162Scf00553g00086 Petunia axillaris HOM05D000222 ORTHO05D000329 1.9e-09 67.0 155 32.3
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 1.9e-09 67.0 156 32.1
BcaNung01125 Brassica carinata HOM05D000222 ORTHO05D000329 2.5e-09 66.6 187 31.0
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 2.5e-09 66.6 156 32.1
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 2.5e-09 66.6 156 32.1
ClCG08G014210 Citrullus lanatus HOM05D000222 ORTHO05D000329 3.2e-09 66.2 183 29.5
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 3.2e-09 66.2 175 30.3
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 3.2e-09 66.2 171 31.0
Ca_13433_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 4.2e-09 65.9 156 32.1
Ca_28044_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 4.2e-09 65.9 156 32.1
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 4.2e-09 65.9 186 30.6
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 4.2e-09 65.9 156 32.7
Atru.chr13.272 Acer truncatum HOM05D000222 ORTHO05D000329 5.5e-09 65.5 155 32.3
AT4G24190 Arabidopsis thaliana HOM05D000222 ORTHO05D000329 5.5e-09 65.5 198 31.3
RhsimUnG0065400 Rhododendron simsii HOM05D000222 ORTHO05D000329 5.5e-09 65.5 189 30.2
Solyc04g081570.3 Solanum lycopersicum HOM05D000222 ORTHO05D000329 5.5e-09 65.5 154 33.1
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 7.1e-09 65.1 152 32.9
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 7.1e-09 65.1 154 31.8
HPP92_012933 Vanilla planifolia HOM05D000222 ORTHO05D000329 7.1e-09 65.1 154 31.8
CARHR231600 Cardamine hirsuta HOM05D000222 ORTHO05D000329 9.3e-09 64.7 157 33.8
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 9.3e-09 64.7 180 30.0
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 9.3e-09 64.7 156 31.4
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 9.3e-09 64.7 168 32.7
Zm00001eb228120 Zea mays HOM05D000222 ORTHO05D000329 9.3e-09 64.7 179 30.2
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 1.2e-08 64.3 153 32.0
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 1.2e-08 64.3 153 32.0
A01p15520 Brassica napus HOM05D000222 ORTHO05D000329 1.2e-08 64.3 153 32.7
BraA01t01491Z Brassica rapa HOM05D000222 ORTHO05D000329 1.2e-08 64.3 153 32.7
Carub.0007s1690 Capsella rubella HOM05D000222 ORTHO05D000329 1.2e-08 64.3 178 30.3
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 1.2e-08 64.3 181 30.4
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 1.2e-08 64.3 159 30.2
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.2e-08 64.3 155 32.3
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.2e-08 64.3 155 32.3
Zm00001eb272290 Zea mays HOM05D000222 ORTHO05D000329 1.2e-08 64.3 156 32.1
C07p53420 Brassica napus HOM05D000222 ORTHO05D000329 1.6e-08 63.9 179 30.7
BolC7t45836H Brassica oleracea HOM05D000222 ORTHO05D000329 1.6e-08 63.9 179 30.7
CSS0018705 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 1.6e-08 63.9 156 32.1
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 1.6e-08 63.9 187 31.6
MD08G1011200 Malus domestica HOM05D000222 ORTHO05D000329 1.6e-08 63.9 148 32.4
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 1.6e-08 63.9 171 30.4
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 2.1e-08 63.5 171 30.4
AL7G29090 Arabidopsis lyrata HOM05D000222 ORTHO05D000329 2.1e-08 63.5 198 31.3
Sp7g22160 Schrenkiella parvula HOM05D000222 ORTHO05D000329 2.1e-08 63.5 179 31.8
CAN.G311.42 Capsicum annuum HOM05D000222 ORTHO05D000329 7.9e-08 61.6 143 33.6
BraA08t34104Z Brassica rapa HOM05D000222 ORTHO05D000329 1.0e-07 61.2 168 31.0
SEGI_06170 Sequoiadendron giganteum HOM05D000222 ORTHO05D000329 1.0e-07 61.2 156 30.1
A08p21570 Brassica napus HOM05D000222 ORTHO05D000329 1.3e-07 60.8 168 31.0
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 1.3e-07 60.8 151 29.8
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 1.3e-07 60.8 154 31.8
SHI39056 Sapria himalayana HOM05D000222 ORTHO05D000329 1.3e-07 60.8 39 79.5
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 2.3e-07 60.1 156 29.5
SHI36457 Sapria himalayana HOM05D010085 ORTHO05D366373 3.0e-07 59.7 34 85.3
BcaC07g38137 Brassica carinata HOM05D000222 ORTHO05D000329 5.1e-07 58.9 148 31.1
HanXRQChr12g0366871 Helianthus annuus HOM05D000222 ORTHO05D000329 5.1e-07 58.9 183 30.1
Pp3c14_3360 Physcomitrium patens HOM05D000222 ORTHO05D000329 1.5e-06 57.4 206 26.7
SHI38126 Sapria himalayana HOM05D010085 ORTHO05D011712 1.5e-06 57.4 94 42.6
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 1.9e-06 57.0 154 29.9
BolC8t48563H Brassica oleracea HOM05D000222 ORTHO05D000329 2.5e-06 56.6 197 25.9
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 3.3e-06 56.2 157 29.9
Mapoly0031s0145 Marchantia polymorpha HOM05D000222 ORTHO05D000329 5.7e-06 55.5 151 29.1
AagrBONN_evm.TU.Sc2ySwM_344.3459 Anthoceros agrestis HOM05D000222 ORTHO05D000329 9.7e-06 54.7 151 27.2


User provided reference genes

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