Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI29601 Sapria himalayana HOM05D000156 ORTHO05D002570 1.9e-34 148.7 78 100.0
Manes.05G017200 Manihot esculenta HOM05D000156 ORTHO05D002570 2.1e-09 65.5 55 65.5
Sabra02G0135200 Salix brachista HOM05D000156 ORTHO05D002570 2.1e-09 65.5 55 65.5
MD07G1158100 Malus domestica HOM05D000156 ORTHO05D002570 2.8e-09 65.1 55 61.8
Sabra14G0076900 Salix brachista HOM05D000156 ORTHO05D002570 3.6e-09 64.7 55 63.6
Potri.014G104600 Populus trichocarpa HOM05D000156 ORTHO05D002570 4.7e-09 64.3 55 65.5
Cpa.g.sc141.10 Carica papaya HOM05D000156 ORTHO05D002570 6.2e-09 63.9 84 51.2
Potri.002G178500 Populus trichocarpa HOM05D000156 ORTHO05D002570 8.0e-09 63.5 55 63.6
Cfa003744 Carpinus fangiana HOM05D000156 ORTHO05D002570 1.0e-08 63.2 84 53.6
Haze_15724 Corylus avellana HOM05D000156 ORTHO05D002570 1.0e-08 63.2 84 53.6
Prupe.2G196500 Prunus persica HOM05D000156 ORTHO05D002570 1.0e-08 63.2 56 62.5
A03p31670 Brassica napus HOM05D000156 ORTHO05D002570 1.8e-08 62.4 55 60.0
C03p38690 Brassica napus HOM05D000156 ORTHO05D002570 1.8e-08 62.4 55 60.0
BolC3t16143H Brassica oleracea HOM05D000156 ORTHO05D002570 1.8e-08 62.4 55 60.0
BraA03t12345Z Brassica rapa HOM05D000156 ORTHO05D002570 1.8e-08 62.4 55 60.0
FvH4_5g10710 Fragaria vesca HOM05D000156 ORTHO05D002570 1.8e-08 62.4 55 61.8
FAN08G2933 Fragaria x ananassa HOM05D000156 ORTHO05D002570 1.8e-08 62.4 55 61.8
CAN.G132.24 Capsicum annuum HOM05D000156 ORTHO05D002570 2.3e-08 62.0 55 65.5
MD01G1087900 Malus domestica HOM05D000156 ORTHO05D002570 2.3e-08 62.0 84 47.6
EL10Ac1g00195 Beta vulgaris HOM05D000156 ORTHO05D002570 3.1e-08 61.6 55 60.0
Ciclev10019596m.g Citrus clementina HOM05D000156 ORTHO05D002570 3.1e-08 61.6 55 58.2
Lj9A604G68 Lonicera japonica HOM05D000156 ORTHO05D002570 4.0e-08 61.2 76 53.9
RcHm_v2.0_Chr1g0360961 Rosa chinensis HOM05D000156 ORTHO05D002570 4.0e-08 61.2 57 61.4
Atru.chr5.757 Acer truncatum HOM05D000156 ORTHO05D002570 5.2e-08 60.8 55 63.6
AL6G52640 Arabidopsis lyrata HOM05D000156 ORTHO05D002570 5.2e-08 60.8 55 58.2
Carub.0006s3584 Capsella rubella HOM05D000156 ORTHO05D002570 5.2e-08 60.8 55 58.2
CARHR249510 Cardamine hirsuta HOM05D000156 ORTHO05D002570 5.2e-08 60.8 55 58.2
Thhalv10028557m.g Eutrema salsugineum HOM05D000156 ORTHO05D002570 5.2e-08 60.8 55 58.2
Nitab4.5_0003094g0020 Nicotiana tabacum HOM05D000156 ORTHO05D002570 5.2e-08 60.8 55 63.6
Sp6g01300 Schrenkiella parvula HOM05D000156 ORTHO05D002570 5.2e-08 60.8 55 58.2
RcHm_v2.0_Chr7g0187421 Rosa chinensis HOM05D000156 ORTHO05D002570 6.8e-08 60.5 55 58.2
Aa31LG5G1130 Aethionema arabicum HOM05D000156 ORTHO05D002570 8.9e-08 60.1 55 58.2
BcaC01g06827 Brassica carinata HOM05D000156 ORTHO05D002570 8.9e-08 60.1 55 58.2
Duzib138G0685 Durio zibethinus HOM05D000156 ORTHO05D002570 8.9e-08 60.1 84 48.8
Gohir.D11G105100 Gossypium hirsutum HOM05D000156 ORTHO05D002570 8.9e-08 60.1 55 58.2
Gorai.007G112400 Gossypium raimondii HOM05D000156 ORTHO05D002570 8.9e-08 60.1 55 58.2
MD06G1121100 Malus domestica HOM05D000156 ORTHO05D002570 8.9e-08 60.1 55 58.2
Peaxi162Scf00888g00511 Petunia axillaris HOM05D000156 ORTHO05D002570 8.9e-08 60.1 55 61.8
QL08p046942 Quercus lobata HOM05D000156 ORTHO05D002570 8.9e-08 60.1 77 51.9
AUR62022668 Chenopodium quinoa HOM05D000156 ORTHO05D002570 1.2e-07 59.7 55 58.2
COL.COLO4_06210 Corchorus olitorius HOM05D000156 ORTHO05D002570 1.2e-07 59.7 84 51.2
DCAR_002978 Daucus carota HOM05D000156 ORTHO05D002570 1.2e-07 59.7 55 61.8
Hma1.2p1_0074F.1_g038650 Hydrangea macrophylla HOM05D000156 ORTHO05D002570 1.2e-07 59.7 55 60.0
Nitab4.5_0002053g0040 Nicotiana tabacum HOM05D000156 ORTHO05D002570 1.2e-07 59.7 55 63.6
Ah.05g179010 Amaranthus hybridus HOM05D000156 ORTHO05D002570 1.5e-07 59.3 55 56.4
AT4G00820 Arabidopsis thaliana HOM05D000156 ORTHO05D002570 1.5e-07 59.3 55 56.4
CANSAT56G2321 Cannabis sativa HOM05D000156 ORTHO05D002570 2.0e-07 58.9 84 48.8
CANSAT56G4480 Cannabis sativa HOM05D000156 ORTHO05D002570 2.0e-07 58.9 84 48.8
Sc23g0001840 Simmondsia chinensis HOM05D000156 ORTHO05D002570 2.0e-07 58.9 55 58.2
FvH4_7g17520 Fragaria vesca HOM05D000156 ORTHO05D002570 2.6e-07 58.5 57 59.6
FAN01G0753 Fragaria x ananassa HOM05D000156 ORTHO05D002570 2.6e-07 58.5 57 59.6
FAN06G2177 Fragaria x ananassa HOM05D000156 ORTHO05D002570 2.6e-07 58.5 57 59.6
FAN06G3659 Fragaria x ananassa HOM05D000156 ORTHO05D002570 2.6e-07 58.5 57 59.6
FAN10G3289 Fragaria x ananassa HOM05D000156 ORTHO05D002570 2.6e-07 58.5 57 59.6
FAN10G3472 Fragaria x ananassa HOM05D000156 ORTHO05D002570 2.6e-07 58.5 57 59.6
Prupe.5G131700 Prunus persica HOM05D000156 ORTHO05D002570 3.4e-07 58.2 55 56.4
Aa31LG1G10480 Aethionema arabicum HOM05D000156 ORTHO05D002570 4.4e-07 57.8 55 54.5
FAN13G0978 Fragaria x ananassa HOM05D000156 ORTHO05D002570 4.4e-07 57.8 53 60.4
TWI81G0243 Tripterygium wilfordii HOM05D000156 ORTHO05D002570 5.8e-07 57.4 55 54.5
BcaB03g13557 Brassica carinata HOM05D000156 ORTHO05D002570 7.5e-07 57.0 55 58.2
A10p00780 Brassica napus HOM05D000156 ORTHO05D002570 7.5e-07 57.0 55 54.5
BraA10t42354Z Brassica rapa HOM05D000156 ORTHO05D002570 7.5e-07 57.0 55 54.5
CARHR001350 Cardamine hirsuta HOM05D000156 ORTHO05D002570 7.5e-07 57.0 55 54.5
FAN03G1034 Fragaria x ananassa HOM05D000156 ORTHO05D002570 7.5e-07 57.0 85 48.2
FAN04G0612 Fragaria x ananassa HOM05D000156 ORTHO05D002570 7.5e-07 57.0 53 60.4
Sp1g01160 Schrenkiella parvula HOM05D000156 ORTHO05D002570 7.5e-07 57.0 55 58.2
Potri.001G448100 Populus trichocarpa HOM05D000156 ORTHO05D002570 9.8e-07 56.6 54 61.1
AT1G01110 Arabidopsis thaliana HOM05D000156 ORTHO05D002570 1.3e-06 56.2 55 52.7
MSTRG.2028 Avicennia marina HOM05D000156 ORTHO05D002570 1.3e-06 56.2 54 57.4
Oeu042842.2 Olea europaea HOM05D000156 ORTHO05D002570 1.3e-06 56.2 55 58.2
Dinv32641 Davidia involucrata HOM05D000156 ORTHO05D002570 1.7e-06 55.8 58 63.8
GSVIVG01019668001 Vitis vinifera HOM05D000156 ORTHO05D002570 1.7e-06 55.8 55 58.2
Actinidia08002 Actinidia chinensis HOM05D000156 ORTHO05D002570 2.2e-06 55.5 78 51.3
C05p00820 Brassica napus HOM05D000156 ORTHO05D002570 2.2e-06 55.5 55 56.4
BolC5t28865H Brassica oleracea HOM05D000156 ORTHO05D002570 2.2e-06 55.5 55 56.4
MD07G1170800 Malus domestica HOM05D000156 ORTHO05D002570 2.2e-06 55.5 55 54.5
HanXRQChr06g0166731 Helianthus annuus HOM05D000156 ORTHO05D002570 2.9e-06 55.1 55 54.5
PGR031G3745 Punica granatum HOM05D000156 ORTHO05D002570 2.9e-06 55.1 55 56.4
Actinidia22213 Actinidia chinensis HOM05D000156 ORTHO05D002570 3.7e-06 54.7 55 56.4
Peaxi162Scf00074g00120 Petunia axillaris HOM05D000156 ORTHO05D002570 3.7e-06 54.7 65 49.2
Hund27154 Selenicereus undatus HOM05D000156 ORTHO05D002570 3.7e-06 54.7 55 56.4
PGSC0003DMG400012115 Solanum tuberosum HOM05D000156 ORTHO05D002570 3.7e-06 54.7 54 57.4
Sed0018114 Sechium edule HOM05D000156 ORTHO05D002570 4.9e-06 54.3 56 51.8
AL1G11410 Arabidopsis lyrata HOM05D000156 ORTHO05D002570 6.4e-06 53.9 55 52.7
Thhalv10007299m.g Eutrema salsugineum HOM05D000156 ORTHO05D002570 6.4e-06 53.9 55 54.5
Lalb_Chr10g0100841 Lupinus albus HOM05D000156 ORTHO05D002570 6.4e-06 53.9 55 54.5
Oeu013368.2 Olea europaea HOM05D000156 ORTHO05D002570 6.4e-06 53.9 55 54.5
Carub.0001s0111 Capsella rubella HOM05D000156 ORTHO05D002570 8.3e-06 53.5 55 52.7
Nitab4.5_0002720g0110 Nicotiana tabacum HOM05D000156 ORTHO05D002570 8.3e-06 53.5 54 55.6
Sabra16G0302600 Salix brachista HOM05D000156 ORTHO05D002570 8.3e-06 53.5 54 59.3


User provided reference genes

Program Settings