Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI29095 Sapria himalayana HOM05D004596 ORTHO05D005853 1.5e-146 523.1 313 100.0
Thecc.04G239700 Theobroma cacao HOM05D004596 ORTHO05D005853 1.6e-36 157.5 227 44.9
Dinv44581 Davidia involucrata HOM05D004596 ORTHO05D005853 1.1e-35 154.8 191 49.7
SHI28614 Sapria himalayana HOM05D004596 ORTHO05D005853 2.4e-35 153.7 159 59.1
COL.COLO4_21575 Corchorus olitorius HOM05D004596 ORTHO05D005853 3.1e-35 153.3 191 50.3
Duzib151G0659 Durio zibethinus HOM05D004596 ORTHO05D005853 5.3e-35 152.5 227 42.7
Gohir.A10G117700 Gossypium hirsutum HOM05D004596 ORTHO05D005853 5.3e-35 152.5 227 44.1
TAR362G0583 Trochodendron aralioides HOM05D004596 ORTHO05D005853 5.3e-35 152.5 191 49.7
Nn6g34173 Nelumbo nucifera HOM05D004596 ORTHO05D005853 9.0e-35 151.8 193 48.2
SHI23426 Sapria himalayana HOM05D004596 ORTHO05D005853 9.0e-35 151.8 91 83.5
SHI07929 Sapria himalayana HOM05D004596 ORTHO05D005853 2.6e-34 150.2 92 81.5
MD16G1200600 Malus domestica HOM05D004596 ORTHO05D005853 3.4e-34 149.8 191 48.2
MD13G1201100 Malus domestica HOM05D004596 ORTHO05D005853 5.8e-34 149.1 193 48.2
Ciclev10004189m.g Citrus clementina HOM05D004596 ORTHO05D005853 7.6e-34 148.7 161 54.0
Gorai.011G166400 Gossypium raimondii HOM05D004596 ORTHO05D005853 7.6e-34 148.7 182 50.5
HanXRQChr10g0294771 Helianthus annuus HOM05D004596 ORTHO05D005853 7.6e-34 148.7 163 52.8
Manes.15G033300 Manihot esculenta HOM05D004596 ORTHO05D005853 7.6e-34 148.7 196 48.0
Sc13g0004790 Simmondsia chinensis HOM05D004596 ORTHO05D005853 1.0e-33 148.3 161 53.4
Gohir.D10G149100 Gossypium hirsutum HOM05D004596 ORTHO05D005853 1.7e-33 147.5 182 50.0
Actinidia40113 Actinidia chinensis HOM05D004596 ORTHO05D005853 6.4e-33 145.6 179 49.7
BraA10t42531Z Brassica rapa HOM05D004596 ORTHO05D005853 6.4e-33 145.6 230 40.4
Cpa.g.sc44.129 Carica papaya HOM05D004596 ORTHO05D005853 6.4e-33 145.6 227 42.7
Hma1.2p1_0549F.1_g177080 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 8.4e-33 145.2 161 53.4
Hma1.2p1_1311F.1_g274870 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 8.4e-33 145.2 161 53.4
Potri.010G081400 Populus trichocarpa HOM05D004596 ORTHO05D005853 1.1e-32 144.8 191 47.6
TWI73G0280 Tripterygium wilfordii HOM05D004596 ORTHO05D005853 1.4e-32 144.4 193 48.2
RcHm_v2.0_Chr4g0388191 Rosa chinensis HOM05D004596 ORTHO05D005853 2.5e-32 143.7 163 51.5
SHI30650 Sapria himalayana HOM05D004596 ORTHO05D005853 2.5e-32 143.7 103 72.8
TAR633G0587 Trochodendron aralioides HOM05D004596 ORTHO05D005853 2.5e-32 143.7 191 48.7
CANSAT78G0708 Cannabis sativa HOM05D004596 ORTHO05D005853 3.2e-32 143.3 161 52.8
Prupe.1G022600 Prunus persica HOM05D004596 ORTHO05D005853 4.2e-32 142.9 191 47.1
QL06p000822 Quercus lobata HOM05D004596 ORTHO05D005853 4.2e-32 142.9 162 51.2
GSVIVG01018052001 Vitis vinifera HOM05D004596 ORTHO05D005853 4.2e-32 142.9 193 48.2
ClCG05G004810 Citrullus lanatus HOM05D004596 ORTHO05D005853 5.5e-32 142.5 189 48.7
Medtr4g068740 Medicago truncatula HOM05D004596 ORTHO05D005853 5.5e-32 142.5 167 47.9
arahy.Tifrunner.gnm1.ann1.B8VWLB Arachis hypogaea HOM05D004596 ORTHO05D005853 7.1e-32 142.1 164 50.6
Actinidia04506 Actinidia chinensis HOM05D004596 ORTHO05D005853 9.3e-32 141.7 163 51.5
Sabra08G0120900 Salix brachista HOM05D004596 ORTHO05D005853 9.3e-32 141.7 193 46.1
C05p02420 Brassica napus HOM05D004596 ORTHO05D005853 1.2e-31 141.4 230 39.6
Cfa008428 Carpinus fangiana HOM05D004596 ORTHO05D005853 1.6e-31 141.0 191 46.6
Eucgr.B00983 Eucalyptus grandis HOM05D004596 ORTHO05D005853 1.6e-31 141.0 229 39.7
Lj5g0008006 Lotus japonicus HOM05D004596 ORTHO05D005853 1.6e-31 141.0 167 47.9
Psat7g206760 Pisum sativum HOM05D004596 ORTHO05D005853 1.6e-31 141.0 167 47.9
CiPaw.01G194700 Carya illinoinensis HOM05D004596 ORTHO05D005853 2.1e-31 140.6 193 45.1
Lj3C724G8 Lonicera japonica HOM05D004596 ORTHO05D005853 2.1e-31 140.6 163 51.5
A10p02640 Brassica napus HOM05D004596 ORTHO05D005853 2.7e-31 140.2 230 39.6
Haze_11239 Corylus avellana HOM05D004596 ORTHO05D005853 2.7e-31 140.2 193 46.1
Aqoxy2G03471 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 3.5e-31 139.8 180 45.6
Potri.008G158600 Populus trichocarpa HOM05D004596 ORTHO05D005853 3.5e-31 139.8 193 46.1
Sabra10G0061500 Salix brachista HOM05D004596 ORTHO05D005853 3.5e-31 139.8 193 45.6
MSTRG.4066 Avicennia marina HOM05D004596 ORTHO05D005853 4.6e-31 139.4 174 46.6
CSS0040136 Camellia sinensis var. sinensis HOM05D004596 ORTHO05D005853 4.6e-31 139.4 161 51.6
Sopen09g031650 Solanum pennellii HOM05D004596 ORTHO05D005853 6.0e-31 139.0 227 40.5
BcaC05g24461 Brassica carinata HOM05D004596 ORTHO05D005853 7.9e-31 138.7 230 39.1
BolC5t29021H Brassica oleracea HOM05D004596 ORTHO05D005853 7.9e-31 138.7 230 39.1
arahy.Tifrunner.gnm1.ann1.0IB5VB Arachis hypogaea HOM05D004596 ORTHO05D005853 1.0e-30 138.3 164 49.4
SHI01996 Sapria himalayana HOM05D004596 ORTHO05D005853 1.3e-30 137.9 92 76.1
Solyc09g082800.3 Solanum lycopersicum HOM05D004596 ORTHO05D005853 1.3e-30 137.9 227 40.5
PGSC0003DMG400030169 Solanum tuberosum HOM05D004596 ORTHO05D005853 1.8e-30 137.5 227 40.1
CsaV3_3G012850 Cucumis sativus L. HOM05D004596 ORTHO05D005853 2.3e-30 137.1 193 46.6
Thhalv10006614m.g Eutrema salsugineum HOM05D004596 ORTHO05D005853 2.3e-30 137.1 228 37.3
Sp1g03030 Schrenkiella parvula HOM05D004596 ORTHO05D005853 2.3e-30 137.1 228 39.0
PGR142G3885 Punica granatum HOM05D004596 ORTHO05D005853 5.1e-30 136.0 174 49.4
SHI23050 Sapria himalayana HOM05D004596 ORTHO05D005853 5.1e-30 136.0 92 76.1
Nitab4.5_0000224g0010 Nicotiana tabacum HOM05D004596 ORTHO05D005853 6.7e-30 135.6 227 38.3
Nitab4.5_0002652g0030 Nicotiana tabacum HOM05D004596 ORTHO05D005853 6.7e-30 135.6 227 38.3
Ah.13g071800 Amaranthus hybridus HOM05D004596 ORTHO05D005853 8.7e-30 135.2 164 48.8
Cc03_g04360 Coffea canephora HOM05D004596 ORTHO05D005853 8.7e-30 135.2 197 43.7
FAN22G1518 Fragaria x ananassa HOM05D004596 ORTHO05D005853 8.7e-30 135.2 161 50.3
Atru.chr4.2330 Acer truncatum HOM05D004596 ORTHO05D005853 1.1e-29 134.8 158 50.0
Aqoxy7G01427 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 1.1e-29 134.8 178 44.9
CARHR003540 Cardamine hirsuta HOM05D004596 ORTHO05D005853 1.1e-29 134.8 193 43.0
FvH4_4g29700 Fragaria vesca HOM05D004596 ORTHO05D005853 1.1e-29 134.8 161 50.3
Peaxi162Scf00316g00026 Petunia axillaris HOM05D004596 ORTHO05D005853 1.1e-29 134.8 161 49.1
AT1G04210 Arabidopsis thaliana HOM05D004596 ORTHO05D005853 1.5e-29 134.4 228 37.3
FAN17G0232 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.5e-29 134.4 194 44.8
MBI11_g37065_MAGBIO Magnolia biondii HOM05D004596 ORTHO05D005853 1.5e-29 134.4 175 44.0
TPR.G29898 Trifolium pratense HOM05D004596 ORTHO05D005853 1.5e-29 134.4 164 47.0
BcaC07g42199 Brassica carinata HOM05D004596 ORTHO05D005853 1.9e-29 134.0 193 43.0
Glyma.10G243000 Glycine max HOM05D004596 ORTHO05D005853 1.9e-29 134.0 168 45.8
Sed0001129 Sechium edule HOM05D004596 ORTHO05D005853 1.9e-29 134.0 189 45.0
RcHm_v2.0_Chr4g0437941 Rosa chinensis HOM05D004596 ORTHO05D005853 2.5e-29 133.7 161 49.7
FAN22G0929 Fragaria x ananassa HOM05D004596 ORTHO05D005853 3.3e-29 133.3 191 46.1
THA.LOC104826066 Tarenaya hassleriana HOM05D004596 ORTHO05D005853 3.3e-29 133.3 170 47.6
BolC8t52768H Brassica oleracea HOM05D004596 ORTHO05D005853 4.3e-29 132.9 192 43.8
BraA09t42132Z Brassica rapa HOM05D004596 ORTHO05D005853 4.3e-29 132.9 192 43.8
vmacro08381 Vaccinium macrocarpon HOM05D004596 ORTHO05D005853 4.3e-29 132.9 142 54.2
AL1G13810 Arabidopsis lyrata HOM05D004596 ORTHO05D005853 5.6e-29 132.5 228 39.0
C08p52390 Brassica napus HOM05D004596 ORTHO05D005853 5.6e-29 132.5 192 43.2
FAN07G2222 Fragaria x ananassa HOM05D004596 ORTHO05D005853 5.6e-29 132.5 191 45.5
A09p67970 Brassica napus HOM05D004596 ORTHO05D005853 7.4e-29 132.1 192 43.2
DCAR_024187 Daucus carota HOM05D004596 ORTHO05D005853 7.4e-29 132.1 181 45.3
FvH4_4g01620 Fragaria vesca HOM05D004596 ORTHO05D005853 7.4e-29 132.1 191 45.5
FAN12G2122 Fragaria x ananassa HOM05D004596 ORTHO05D005853 7.4e-29 132.1 191 45.5
Rhsim04G0196700 Rhododendron simsii HOM05D004596 ORTHO05D005853 7.4e-29 132.1 136 55.1
EL10Ac3g06528 Beta vulgaris HOM05D004596 ORTHO05D005853 9.6e-29 131.7 227 39.2
ECA234G3873 Erigeron canadensis HOM05D004596 ORTHO05D005853 9.6e-29 131.7 177 44.1
FAN17G0661 Fragaria x ananassa HOM05D004596 ORTHO05D005853 9.6e-29 131.7 193 45.1
Carub.0001s0340 Capsella rubella HOM05D004596 ORTHO05D005853 1.3e-28 131.3 228 39.0
Ca_20830_v3 Cicer arietinum L. HOM05D004596 ORTHO05D005853 1.3e-28 131.3 167 45.5
CAN.G1435.8 Capsicum annuum HOM05D004596 ORTHO05D005853 1.6e-28 131.0 161 47.2
Glyma.20G151300 Glycine max HOM05D004596 ORTHO05D005853 1.6e-28 131.0 167 44.9
Lalb_Chr02g0140731 Lupinus albus HOM05D004596 ORTHO05D005853 1.6e-28 131.0 164 47.6
AUR62042985 Chenopodium quinoa HOM05D004596 ORTHO05D005853 4.8e-28 129.4 227 37.9
Aa31LG1G20620 Aethionema arabicum HOM05D004596 ORTHO05D005853 8.2e-28 128.6 194 41.2
CDE06G0929 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 3.1e-27 126.7 180 43.9
PSO210G2132 Papaver somniferum HOM05D004596 ORTHO05D005853 9.0e-27 125.2 168 45.8
Migut.N00215 Erythranthe guttata HOM05D004596 ORTHO05D005853 1.2e-26 124.8 176 42.6
PSO461G0024 Papaver somniferum HOM05D004596 ORTHO05D005853 1.2e-26 124.8 168 45.2
Thecc.08G085900 Theobroma cacao HOM05D004596 ORTHO05D005853 1.2e-26 124.8 161 45.3
Hund20642 Selenicereus undatus HOM05D004596 ORTHO05D005853 2.0e-26 124.0 187 42.8
VMungo0720G1744 Vigna mungo HOM05D004596 ORTHO05D005853 2.6e-26 123.6 164 43.3
Phvul.007G062700 Phaseolus vulgaris HOM05D004596 ORTHO05D005853 3.4e-26 123.2 170 42.4
Lsat_1_v5_gn_5_103320 Lactuca sativa HOM05D004596 ORTHO05D005853 4.5e-26 122.9 160 47.5
ATR0665G133 Amborella trichopoda HOM05D004596 ORTHO05D005853 1.7e-25 120.9 165 43.0
Hma1.2p1_0549F.1_g177070 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 3.8e-25 119.8 132 53.8
Os03g0744300 Oryza sativa ssp. japonica HOM05D004596 ORTHO05D005853 1.4e-24 117.9 162 43.8
Oeu064241.3 Olea europaea HOM05D004596 ORTHO05D005853 3.2e-24 116.7 90 65.6
HPP92_023539 Vanilla planifolia HOM05D004596 ORTHO05D005853 3.2e-24 116.7 171 43.9
MELO3C006495.2 Cucumis melo HOM05D004596 ORTHO05D005853 2.1e-23 114.0 92 65.2
SEGI_05896 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 4.6e-23 112.8 161 40.4
SEGI_30385 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 6.7e-22 109.0 161 41.0
FAN12G3612 Fragaria x ananassa HOM05D004596 ORTHO05D005853 8.7e-22 108.6 123 52.0
Glyma.14G105001 Glycine max HOM05D004596 ORTHO05D005853 1.9e-21 107.5 92 59.8
Zm00001eb056920 Zea mays HOM05D004596 ORTHO05D005853 1.9e-21 107.5 162 41.4
Pp3c8_22390 Physcomitrium patens HOM05D004596 ORTHO05D005853 1.6e-20 104.4 163 42.9
AUR62038647 Chenopodium quinoa HOM05D004596 ORTHO05D005853 2.8e-20 103.6 171 40.9
Glyma.10G111500 Glycine max HOM05D004596 ORTHO05D005853 4.8e-20 102.8 92 57.6
Mapoly0005s0269 Marchantia polymorpha HOM05D004596 ORTHO05D005853 1.1e-19 101.7 196 35.7
SHI34261 Sapria himalayana HOM05D004596 ORTHO05D005853 5.3e-19 99.4 63 74.6
SHI24701 Sapria himalayana HOM05D004596 ORTHO05D005853 1.1e-16 91.7 155 43.2
SMO118G0545 Selaginella moellendorffii HOM05D004596 ORTHO05D005853 2.3e-14 84.0 145 40.7
SHI17182 Sapria himalayana HOM05D000004 ORTHO05D367797 3.9e-14 83.2 56 75.0
Lsat_1_v5_gn_1_72981 Lactuca sativa HOM05D004596 ORTHO05D005853 8.8e-14 82.0 80 56.2
SHI31207 Sapria himalayana HOM05D004596 ORTHO05D366118 6.1e-07 59.3 197 35.0


User provided reference genes

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