Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28944 Sapria himalayana HOM05D000210 ORTHO05D005611 9.0e-40 166.4 80 100.0
SHI38642 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-34 149.4 79 88.6
SHI37032 Sapria himalayana HOM05D000210 ORTHO05D005611 7.4e-34 146.7 79 87.3
SHI40250 Sapria himalayana HOM05D000210 ORTHO05D005611 1.8e-32 142.1 79 84.8
SHI38774 Sapria himalayana HOM05D000210 ORTHO05D005611 9.0e-32 139.8 79 87.3
SHI33437 Sapria himalayana HOM05D000210 ORTHO05D005611 2.1e-28 128.6 80 80.0
SHI48848 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-24 115.9 79 73.4
SHI52541 Sapria himalayana HOM05D000210 ORTHO05D005611 2.0e-23 112.1 79 72.2
SHI25125 Sapria himalayana HOM05D000210 ORTHO05D005611 5.9e-23 110.5 79 70.9
SHI37216 Sapria himalayana HOM05D000210 ORTHO05D005611 5.5e-21 104.0 79 67.1
SHI47844 Sapria himalayana HOM05D000210 ORTHO05D005611 2.1e-20 102.1 79 67.1
Gohir.A08G184800 Gossypium hirsutum HOM05D000210 ORTHO05D005611 2.8e-17 91.7 88 46.6
MD11G1293000 Malus domestica HOM05D000210 ORTHO05D005611 3.7e-17 91.3 88 47.7
FvH4_2g24250 Fragaria vesca HOM05D000210 ORTHO05D005611 4.8e-17 90.9 88 44.3
Gohir.D08G202984 Gossypium hirsutum HOM05D000210 ORTHO05D005611 8.2e-17 90.1 88 45.5
Gorai.004G214900 Gossypium raimondii HOM05D000210 ORTHO05D005611 8.2e-17 90.1 88 45.5
RcHm_v2.0_Chr6g0292061 Rosa chinensis HOM05D000210 ORTHO05D005611 8.2e-17 90.1 88 46.6
SHI37091 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-16 89.7 46 91.3
FAN24G2823 Fragaria x ananassa HOM05D000210 ORTHO05D005611 1.4e-16 89.4 88 44.3
CANSAT25G2778 Cannabis sativa HOM05D000210 ORTHO05D005611 1.8e-16 89.0 88 46.6
Prupe.8G248400 Prunus persica HOM05D000210 ORTHO05D005611 1.8e-16 89.0 88 46.6
CiPaw.07G096700 Carya illinoinensis HOM05D000210 ORTHO05D005611 5.3e-16 87.4 88 44.3
QL12p023065 Quercus lobata HOM05D000210 ORTHO05D005611 7.0e-16 87.0 88 44.3
SHI45120 Sapria himalayana HOM05D000210 ORTHO05D005611 7.0e-16 87.0 46 89.1
Eucgr.K03411 Eucalyptus grandis HOM05D000210 ORTHO05D005611 9.1e-16 86.7 88 43.2
COL.COLO4_09151 Corchorus olitorius HOM05D000210 ORTHO05D005611 1.6e-15 85.9 88 43.2
Cfa006073 Carpinus fangiana HOM05D000210 ORTHO05D005611 2.0e-15 85.5 88 44.3
Duzib138G1044 Durio zibethinus HOM05D000210 ORTHO05D005611 2.0e-15 85.5 88 44.3
FAN15G3364 Fragaria x ananassa HOM05D000210 ORTHO05D005611 2.0e-15 85.5 83 45.8
MSTRG.21588 Avicennia marina HOM05D000210 ORTHO05D005611 2.6e-15 85.1 88 46.6
GSVIVG01011052001 Vitis vinifera HOM05D000210 ORTHO05D005611 2.6e-15 85.1 88 44.3
SHI49437 Sapria himalayana HOM05D000210 ORTHO05D005611 3.5e-15 84.7 79 59.5
Haze_04777 Corylus avellana HOM05D000210 ORTHO05D005611 7.7e-15 83.6 88 43.2
VMungo1383G3377 Vigna mungo HOM05D000210 ORTHO05D005611 7.7e-15 83.6 88 43.2
Dinv11271 Davidia involucrata HOM05D000210 ORTHO05D005611 1.0e-14 83.2 88 40.9
Glyma.03G149400 Glycine max HOM05D000210 ORTHO05D005611 1.3e-14 82.8 88 43.2
SHI48588 Sapria himalayana HOM05D000210 ORTHO05D005611 2.2e-14 82.0 79 58.2
SHI42430 Sapria himalayana HOM05D000210 ORTHO05D005611 2.9e-14 81.6 46 84.8
Thecc.01G286500 Theobroma cacao HOM05D000210 ORTHO05D005611 2.9e-14 81.6 88 43.2
Atru.chr5.1322 Acer truncatum HOM05D000210 ORTHO05D005611 3.8e-14 81.3 88 42.0
Phvul.001G147300 Phaseolus vulgaris HOM05D000210 ORTHO05D005611 3.8e-14 81.3 88 42.0
SHI47299 Sapria himalayana HOM05D000210 ORTHO05D005611 3.8e-14 81.3 79 58.2
Ciclev10019466m.g Citrus clementina HOM05D000210 ORTHO05D005611 5.0e-14 80.9 88 43.2
Eucgr.K03410 Eucalyptus grandis HOM05D000210 ORTHO05D005611 5.0e-14 80.9 88 40.9
SHI48058 Sapria himalayana HOM05D000210 ORTHO05D005611 5.0e-14 80.9 79 58.2
Potri.014G136800 Populus trichocarpa HOM05D000210 ORTHO05D005611 6.5e-14 80.5 88 40.9
Hund05363 Selenicereus undatus HOM05D000210 ORTHO05D005611 6.5e-14 80.5 88 38.6
Sabra14G0103200 Salix brachista HOM05D000210 ORTHO05D005611 1.1e-13 79.7 88 40.9
vmacro14947 Vaccinium macrocarpon HOM05D000210 ORTHO05D005611 1.5e-13 79.3 88 42.0
CDE09G1445 Ceratophyllum demersum HOM05D000210 ORTHO05D005611 1.9e-13 79.0 88 39.8
TAR633G2129 Trochodendron aralioides HOM05D000210 ORTHO05D005611 1.9e-13 79.0 88 42.0
AUR62034578 Chenopodium quinoa HOM05D000210 ORTHO05D005611 5.5e-13 77.4 88 38.6
Psat3g066840 Pisum sativum HOM05D000210 ORTHO05D005611 5.5e-13 77.4 88 37.5
TPR.G32800 Trifolium pratense HOM05D000210 ORTHO05D005611 1.2e-12 76.3 89 39.3
Nn4g26117 Nelumbo nucifera HOM05D000210 ORTHO05D005611 1.6e-12 75.9 88 39.8
Medtr7g094190 Medicago truncatula HOM05D000210 ORTHO05D005611 2.1e-12 75.5 88 35.2
arahy.Tifrunner.gnm1.ann1.2F1JWB Arachis hypogaea HOM05D002837 ORTHO05D005611 2.7e-12 75.1 90 42.2
CSS0008686 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 2.7e-12 75.1 88 39.8
Ah.08g212840 Amaranthus hybridus HOM05D000210 ORTHO05D005611 4.7e-12 74.3 88 38.6
Medtr7g094330 Medicago truncatula HOM05D000210 ORTHO05D005611 4.7e-12 74.3 87 35.6
CSS0038921 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 6.1e-12 73.9 88 39.8
Actinidia21087 Actinidia chinensis HOM05D000210 ORTHO05D005611 1.0e-11 73.2 88 36.4
Lj1g0017777 Lotus japonicus HOM05D000210 ORTHO05D005611 1.8e-11 72.4 88 37.5
CSS0026102 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 5.2e-11 70.9 87 39.1
Manes.01G211600 Manihot esculenta HOM05D000210 ORTHO05D005611 5.2e-11 70.9 80 43.8
Lj1C42G11 Lonicera japonica HOM05D000210 ORTHO05D005611 6.7e-11 70.5 88 35.2
SHI46659 Sapria himalayana HOM05D000210 ORTHO05D005611 6.7e-11 70.5 37 83.8
SHI32945 Sapria himalayana HOM05D000210 ORTHO05D005611 5.7e-10 67.4 46 67.4
SHI30997 Sapria himalayana HOM05D000210 ORTHO05D005611 9.7e-10 66.6 45 66.7
arahy.Tifrunner.gnm1.ann1.CG37GB Arachis hypogaea HOM05D000210 ORTHO05D005611 1.3e-09 66.2 91 36.3
SHI35107 Sapria himalayana HOM05D000210 ORTHO05D005611 2.2e-09 65.5 40 77.5
arahy.Tifrunner.gnm1.ann1.11MVEE Arachis hypogaea HOM05D000210 ORTHO05D005611 2.8e-09 65.1 90 36.7
SHI48821 Sapria himalayana HOM05D000210 ORTHO05D005611 3.7e-09 64.7 65 58.5
C03p06960 Brassica napus HOM05D000210 ORTHO05D000247 8.2e-09 63.5 84 36.9
BolC3t13196H Brassica oleracea HOM05D000210 ORTHO05D000247 8.2e-09 63.5 84 36.9
Sp6g30670 Schrenkiella parvula HOM05D000210 ORTHO05D000247 8.2e-09 63.5 84 39.3
AT5G13320 Arabidopsis thaliana HOM05D000210 ORTHO05D000247 2.4e-08 62.0 84 38.1
BcaNung01164 Brassica carinata HOM05D000210 ORTHO05D000247 4.1e-08 61.2 84 36.9
BcaNung01877 Brassica carinata HOM05D000210 ORTHO05D000247 5.3e-08 60.8 84 36.9
C02p06050 Brassica napus HOM05D000210 ORTHO05D000247 5.3e-08 60.8 84 36.9
BolC2t06547H Brassica oleracea HOM05D000210 ORTHO05D000247 5.3e-08 60.8 84 36.9
Hma1.2p1_1494F.1_g286870 Hydrangea macrophylla HOM05D000210 ORTHO05D000247 5.3e-08 60.8 84 34.5
BcaC04g19122 Brassica carinata HOM05D000210 ORTHO05D000247 7.0e-08 60.5 84 35.7
A10p24880 Brassica napus HOM05D000210 ORTHO05D000247 7.0e-08 60.5 84 35.7
C09p63740 Brassica napus HOM05D000210 ORTHO05D000247 7.0e-08 60.5 84 35.7
BolC9t59215H Brassica oleracea HOM05D000210 ORTHO05D000247 7.0e-08 60.5 84 35.7
SEGI_08565 Sequoiadendron giganteum HOM05D000210 ORTHO05D005611 7.0e-08 60.5 87 34.5
A02p01840 Brassica napus HOM05D000210 ORTHO05D000247 1.6e-07 59.3 83 36.1
A03p05930 Brassica napus HOM05D000210 ORTHO05D000247 1.6e-07 59.3 84 35.7
BraA02t05158Z Brassica rapa HOM05D000210 ORTHO05D000247 1.6e-07 59.3 83 36.1
BraA03t09931Z Brassica rapa HOM05D000210 ORTHO05D000247 1.6e-07 59.3 84 35.7
SHI06056 Sapria himalayana HOM05D000210 ORTHO05D005611 1.6e-07 59.3 29 82.8
BraA10t44551Z Brassica rapa HOM05D000210 ORTHO05D000247 3.5e-07 58.2 84 34.5
AL6G23940 Arabidopsis lyrata HOM05D000210 ORTHO05D000247 4.5e-07 57.8 84 35.7
FAN07G2842 Fragaria x ananassa HOM05D000210 ORTHO05D000247 7.7e-07 57.0 84 36.9
Gohir.A11G286282 Gossypium hirsutum HOM05D000210 ORTHO05D000247 1.0e-06 56.6 84 34.5
FvH4_4g22430 Fragaria vesca HOM05D000210 ORTHO05D000247 1.3e-06 56.2 84 35.7
FAN12G3792 Fragaria x ananassa HOM05D000210 ORTHO05D000247 1.3e-06 56.2 84 35.7
Gohir.A11G285800 Gossypium hirsutum HOM05D000210 ORTHO05D000247 1.7e-06 55.8 84 34.5
FAN17G0031 Fragaria x ananassa HOM05D000210 ORTHO05D000247 2.2e-06 55.5 84 35.7
SHI33220 Sapria himalayana HOM05D000024 ORTHO05D000007 2.2e-06 55.5 29 75.9
Carub.0007s2693 Capsella rubella HOM05D000210 ORTHO05D000247 2.9e-06 55.1 84 32.1
Prupe.1G213200 Prunus persica HOM05D000210 ORTHO05D000247 2.9e-06 55.1 84 33.3
CSS0006249 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D000247 3.8e-06 54.7 85 32.9
Aa31LG7G5100 Aethionema arabicum HOM05D000210 ORTHO05D000247 5.0e-06 54.3 84 33.3
BcaB01g05363 Brassica carinata HOM05D000210 ORTHO05D000247 5.0e-06 54.3 85 35.3
Gohir.D11G298700 Gossypium hirsutum HOM05D000210 ORTHO05D000247 5.0e-06 54.3 84 34.5
Gorai.007G323600 Gossypium raimondii HOM05D000210 ORTHO05D000247 5.0e-06 54.3 84 34.5
Os05g0143800 Oryza sativa ssp. japonica HOM05D000210 ORTHO05D005611 5.0e-06 54.3 82 34.1
SHI01933 Sapria himalayana HOM05D000210 ORTHO05D005611 5.0e-06 54.3 66 47.0
Aa31sc45G60 Aethionema arabicum HOM05D000210 ORTHO05D000247 6.5e-06 53.9 84 32.1
Gohir.A11G285841 Gossypium hirsutum HOM05D000210 ORTHO05D000247 6.5e-06 53.9 84 32.1
Sp7g13300 Schrenkiella parvula HOM05D000210 ORTHO05D000247 6.5e-06 53.9 84 29.8
BcaC02g08221 Brassica carinata HOM05D000210 ORTHO05D000247 8.5e-06 53.5 84 32.1
C07p59740 Brassica napus HOM05D000210 ORTHO05D000247 8.5e-06 53.5 84 33.3
BolC7t46420H Brassica oleracea HOM05D000210 ORTHO05D000247 8.5e-06 53.5 84 33.3
Nitab4.5_0002370g0050 Nicotiana tabacum HOM05D000210 ORTHO05D001446 8.5e-06 53.5 91 31.9
SHI42429 Sapria himalayana HOM05D000210 ORTHO05D005611 8.5e-06 53.5 27 77.8
THA.LOC104825463 Tarenaya hassleriana HOM05D000210 ORTHO05D000247 8.5e-06 53.5 84 33.3


User provided reference genes

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