Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28922 Sapria himalayana HOM05D003599 ORTHO05D004221 2.5e-139 498.8 256 100.0
Oeu034893.1 Olea europaea HOM05D003599 ORTHO05D004221 3.6e-42 176.0 187 52.4
QL04p003920 Quercus lobata HOM05D003599 ORTHO05D004221 3.6e-42 176.0 191 53.9
QL04p004288 Quercus lobata HOM05D003599 ORTHO05D004221 3.6e-42 176.0 191 53.9
Eucgr.J01252 Eucalyptus grandis HOM05D003599 ORTHO05D004221 6.2e-42 175.3 189 51.9
Phvul.005G037000 Phaseolus vulgaris HOM05D003599 ORTHO05D004221 8.1e-42 174.9 187 52.4
Rhsim07G0053800 Rhododendron simsii HOM05D003599 ORTHO05D004221 8.1e-42 174.9 191 50.8
Dinv43904 Davidia involucrata HOM05D003599 ORTHO05D004221 1.1e-41 174.5 189 52.4
VMungo1080G1621 Vigna mungo HOM05D003599 ORTHO05D004221 1.1e-41 174.5 226 46.5
Medtr3g027610 Medicago truncatula HOM05D003599 ORTHO05D004221 1.4e-41 174.1 203 50.2
Cc02_g27450 Coffea canephora HOM05D003599 ORTHO05D004221 3.1e-41 172.9 191 51.3
Haze_03250 Corylus avellana HOM05D003599 ORTHO05D004221 3.1e-41 172.9 189 51.9
vmacro13647 Vaccinium macrocarpon HOM05D003599 ORTHO05D004221 5.3e-41 172.2 221 46.6
Ca_26231_v3 Cicer arietinum L. HOM05D003599 ORTHO05D004221 1.2e-40 171.0 238 44.1
TPR.G12253 Trifolium pratense HOM05D003599 ORTHO05D004221 1.5e-40 170.6 188 52.1
CANSAT56G1134 Cannabis sativa HOM05D003599 ORTHO05D004221 2.0e-40 170.2 189 50.8
Gorai.004G174400 Gossypium raimondii HOM05D003599 ORTHO05D004221 2.6e-40 169.9 196 50.0
arahy.Tifrunner.gnm1.ann1.V362W9 Arachis hypogaea HOM05D003599 ORTHO05D004221 3.4e-40 169.5 192 49.0
arahy.Tifrunner.gnm1.ann1.X69RYV Arachis hypogaea HOM05D003599 ORTHO05D004221 3.4e-40 169.5 192 49.0
Glyma.08G152400 Glycine max HOM05D003599 ORTHO05D004221 4.5e-40 169.1 228 45.2
Psat5g207160 Pisum sativum HOM05D003599 ORTHO05D004221 4.5e-40 169.1 204 48.5
Gohir.D08G167000 Gossypium hirsutum HOM05D003599 ORTHO05D004221 5.8e-40 168.7 196 49.5
MELO3C023955.2 Cucumis melo HOM05D003599 ORTHO05D004221 9.9e-40 167.9 189 51.3
Glyma.15G271800 Glycine max HOM05D003599 ORTHO05D004221 1.7e-39 167.2 187 49.7
Lj3g0018349 Lotus japonicus HOM05D003599 ORTHO05D004221 1.7e-39 167.2 228 45.2
CsaV3_3G032340 Cucumis sativus L. HOM05D003599 ORTHO05D004221 3.8e-39 166.0 189 50.8
Duzib268G0099 Durio zibethinus HOM05D003599 ORTHO05D004221 3.8e-39 166.0 191 49.2
Manes.07G003200 Manihot esculenta HOM05D003599 ORTHO05D004221 6.4e-39 165.2 226 45.6
MD07G1005500 Malus domestica HOM05D003599 ORTHO05D004221 1.1e-38 164.5 185 50.8
TWI53G1897 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 1.1e-38 164.5 205 46.8
Ciclev10030514m.g Citrus clementina HOM05D003599 ORTHO05D004221 1.4e-38 164.1 186 51.6
ClCG10G012550 Citrullus lanatus HOM05D003599 ORTHO05D004221 1.9e-38 163.7 189 50.3
Thecc.01G414600 Theobroma cacao HOM05D003599 ORTHO05D004221 1.9e-38 163.7 191 49.2
Lalb_Chr25g0283241 Lupinus albus HOM05D003599 ORTHO05D004221 4.2e-38 162.5 182 50.0
MD02G1316400 Malus domestica HOM05D003599 ORTHO05D004221 7.1e-38 161.8 185 48.6
CiPaw.13G001900 Carya illinoinensis HOM05D003599 ORTHO05D004221 9.3e-38 161.4 189 48.7
TWI73G0659 Tripterygium wilfordii HOM05D003599 ORTHO05D004221 2.1e-37 160.2 205 45.4
THA.LOC104801983 Tarenaya hassleriana HOM05D003599 ORTHO05D004221 2.7e-37 159.8 198 49.5
PSO384G0358 Papaver somniferum HOM05D003599 ORTHO05D004221 1.0e-36 157.9 218 45.9
MSTRG.17057 Avicennia marina HOM05D003599 ORTHO05D004221 2.3e-36 156.8 193 48.7
PSO339G0158 Papaver somniferum HOM05D003599 ORTHO05D004221 3.9e-36 156.0 218 45.4
Lj7C568T3 Lonicera japonica HOM05D003599 ORTHO05D004221 5.1e-36 155.6 222 47.7
Potri.001G271200 Populus trichocarpa HOM05D003599 ORTHO05D004221 5.1e-36 155.6 206 45.1
Atru.chr11.2631 Acer truncatum HOM05D003599 ORTHO05D004221 6.7e-36 155.2 184 51.1
Potri.009G065300 Populus trichocarpa HOM05D003599 ORTHO05D004221 8.7e-36 154.8 206 45.1
Sc11g0009360 Simmondsia chinensis HOM05D003599 ORTHO05D004221 8.7e-36 154.8 221 43.4
ATR0605G051 Amborella trichopoda HOM05D003599 ORTHO05D004221 1.5e-35 154.1 186 48.4
Sed0009971 Sechium edule HOM05D003599 ORTHO05D004221 1.5e-35 154.1 185 49.7
Lj3g0008997 Lotus japonicus HOM05D003599 ORTHO05D004221 7.4e-35 151.8 189 46.6
HanXRQChr01g0017271 Helianthus annuus HOM05D003599 ORTHO05D004221 1.3e-34 151.0 212 47.2
Sabra16G0166600 Salix brachista HOM05D003599 ORTHO05D004221 1.3e-34 151.0 212 43.9
COL.COLO4_23904 Corchorus olitorius HOM05D003599 ORTHO05D004221 1.6e-34 150.6 192 46.9
Aa31LG10G7230 Aethionema arabicum HOM05D003599 ORTHO05D004221 2.1e-34 150.2 179 47.5
Migut.B01342 Erythranthe guttata HOM05D003599 ORTHO05D004221 2.1e-34 150.2 187 49.7
Peaxi162Scf00058g00215 Petunia axillaris HOM05D003599 ORTHO05D004221 2.8e-34 149.8 188 46.3
Sopen01g033750 Solanum pennellii HOM05D003599 ORTHO05D004221 3.7e-34 149.4 186 45.7
RcHm_v2.0_Chr4g0410621 Rosa chinensis HOM05D003599 ORTHO05D004221 1.1e-33 147.9 203 46.3
PGSC0003DMG400025257 Solanum tuberosum HOM05D003599 ORTHO05D004221 1.4e-33 147.5 186 47.3
CARHR161880 Cardamine hirsuta HOM05D003599 ORTHO05D004221 1.8e-33 147.1 204 44.1
Prupe.2G007800 Prunus persica HOM05D003599 ORTHO05D004221 1.8e-33 147.1 189 47.6
DCAR_029635 Daucus carota HOM05D003599 ORTHO05D004221 2.4e-33 146.7 183 48.6
Lsat_1_v5_gn_1_110320 Lactuca sativa HOM05D003599 ORTHO05D004221 2.4e-33 146.7 182 49.5
Sed0001465 Sechium edule HOM05D003599 ORTHO05D004221 3.1e-33 146.4 189 48.1
Carub.0005s1848 Capsella rubella HOM05D003599 ORTHO05D004221 9.0e-33 144.8 204 44.1
Gohir.A08G146100 Gossypium hirsutum HOM05D003599 ORTHO05D004221 1.2e-32 144.4 210 42.9
AL5G32710 Arabidopsis lyrata HOM05D003599 ORTHO05D004221 1.5e-32 144.1 204 44.1
AT3G52140 Arabidopsis thaliana HOM05D003599 ORTHO05D004221 1.5e-32 144.1 204 44.6
QL04p003768 Quercus lobata HOM05D003599 ORTHO05D004221 3.4e-32 142.9 160 52.5
GSVIVG01032046001 Vitis vinifera HOM05D003599 ORTHO05D004221 4.5e-32 142.5 195 43.6
FAN17G0189 Fragaria x ananassa HOM05D003599 ORTHO05D004221 9.9e-32 141.4 190 46.3
FvH4_4g12380 Fragaria vesca HOM05D003599 ORTHO05D004221 1.3e-31 141.0 190 46.3
FAN12G0010 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.3e-31 141.0 190 46.3
FAN12G2088 Fragaria x ananassa HOM05D003599 ORTHO05D004221 1.3e-31 141.0 190 46.3
MBI01_g15744_MAGBIO Magnolia biondii HOM05D003599 ORTHO05D004221 2.2e-31 140.2 185 44.3
MBI01_g43277_MAGBIO Magnolia biondii HOM05D003599 ORTHO05D004221 2.2e-31 140.2 221 40.7
Nn7g36074 Nelumbo nucifera HOM05D003599 ORTHO05D004221 2.2e-31 140.2 187 43.9
FAN07G2146 Fragaria x ananassa HOM05D003599 ORTHO05D004221 2.9e-31 139.8 227 42.3
CSS0018905 Camellia sinensis var. sinensis HOM05D003599 ORTHO05D004221 3.8e-31 139.4 191 47.1
Migut.N01485 Erythranthe guttata HOM05D003599 ORTHO05D004221 4.9e-31 139.0 215 43.7
FAN22G1903 Fragaria x ananassa HOM05D003599 ORTHO05D004221 6.4e-31 138.7 190 45.8
CDE05G2426 Ceratophyllum demersum HOM05D003599 ORTHO05D004221 3.2e-30 136.3 207 42.0
Thhalv10010065m.g Eutrema salsugineum HOM05D003599 ORTHO05D004221 1.2e-29 134.4 175 46.9
Actinidia31044 Actinidia chinensis HOM05D003599 ORTHO05D004221 2.7e-29 133.3 189 42.9
HPP92_003004 Vanilla planifolia HOM05D003599 ORTHO05D004221 7.9e-29 131.7 181 44.8
HPP92_003005 Vanilla planifolia HOM05D003599 ORTHO05D004221 1.0e-28 131.3 181 44.8
CAN.G1393.20 Capsicum annuum HOM05D003599 ORTHO05D004221 1.9e-27 127.1 175 44.0
PGR044G0248 Punica granatum HOM05D003599 ORTHO05D004221 2.5e-27 126.7 184 45.1
Sabra09G0048500 Salix brachista HOM05D003599 ORTHO05D004221 4.3e-27 125.9 205 39.5
CDE05G3296 Ceratophyllum demersum HOM05D003599 ORTHO05D004221 7.4e-27 125.2 177 46.9
Sp5g10140 Schrenkiella parvula HOM05D003599 ORTHO05D004221 7.4e-27 125.2 205 42.0
A04p07220 Brassica napus HOM05D003599 ORTHO05D004221 4.8e-26 122.5 204 41.7
BraA04t16417Z Brassica rapa HOM05D003599 ORTHO05D004221 4.8e-26 122.5 204 41.7
SEGI_10833 Sequoiadendron giganteum HOM05D003599 ORTHO05D004221 1.8e-25 120.6 175 41.7
A09p45200 Brassica napus HOM05D003599 ORTHO05D004221 2.4e-25 120.2 190 43.7
C08p27410 Brassica napus HOM05D003599 ORTHO05D004221 2.4e-25 120.2 205 42.9
BraA09t39983Z Brassica rapa HOM05D003599 ORTHO05D004221 6.9e-25 118.6 204 43.1
AUR62009368 Chenopodium quinoa HOM05D003599 ORTHO05D004221 9.0e-25 118.2 191 41.9
C04p40780 Brassica napus HOM05D003599 ORTHO05D004221 1.5e-24 117.5 204 40.7
BolC4t25662H Brassica oleracea HOM05D003599 ORTHO05D004221 1.5e-24 117.5 204 40.7
Zm00001eb189030 Zea mays HOM05D003599 ORTHO05D004221 1.3e-23 114.4 210 41.9
Cpa.g.sc234.1 Carica papaya HOM05D003599 ORTHO05D004221 2.2e-23 113.6 146 45.2
Lalb_Chr20g0108081 Lupinus albus HOM05D003599 ORTHO05D004221 2.2e-23 113.6 183 39.9
Zm00001eb252790 Zea mays HOM05D003599 ORTHO05D004221 2.2e-23 113.6 201 41.3
AUR62023049 Chenopodium quinoa HOM05D003599 ORTHO05D004221 2.9e-23 113.2 191 40.8
unitig_0.g1375 Utricularia gibba HOM05D003599 ORTHO05D004221 2.9e-23 113.2 210 42.9
QL04p003614 Quercus lobata HOM05D003599 ORTHO05D004221 4.9e-23 112.5 159 45.9
Os02g0717400 Oryza sativa ssp. japonica HOM05D003599 ORTHO05D004221 8.4e-23 111.7 198 41.4
unitig_61.g26447 Utricularia gibba HOM05D003599 ORTHO05D004221 8.4e-23 111.7 178 43.3
Ah.10g024830 Amaranthus hybridus HOM05D003599 ORTHO05D004221 5.5e-22 109.0 221 36.2
ECA248G3304 Erigeron canadensis HOM05D003599 ORTHO05D004221 5.5e-22 109.0 211 36.5
EL10Ac2g04309 Beta vulgaris HOM05D003599 ORTHO05D004221 1.2e-21 107.8 182 40.7
SalBow4G2031 Salvia bowleyana HOM05D003599 ORTHO05D004221 7.9e-21 105.1 224 35.3
BcaC02g09276 Brassica carinata HOM05D003599 ORTHO05D004221 2.3e-20 103.6 192 39.1
QL04p004701 Quercus lobata HOM05D000311 ORTHO05D000183 2.5e-19 100.1 104 55.8
Mapoly0060s0041 Marchantia polymorpha HOM05D003599 ORTHO05D004221 9.7e-19 98.2 179 40.8
Nitab4.5_0001542g0140 Nicotiana tabacum HOM05D003599 ORTHO05D004221 9.7e-19 98.2 155 41.3
Nitab4.5_0004883g0020 Nicotiana tabacum HOM05D003599 ORTHO05D004221 1.1e-17 94.7 155 40.0
CBR_g110 Chara braunii HOM05D003599 ORTHO05D004221 3.1e-17 93.2 182 37.4
SMO141G0154 Selaginella moellendorffii HOM05D003599 ORTHO05D004221 1.5e-16 90.9 155 41.3
arahy.Tifrunner.gnm1.ann1.SKP1EQ Arachis hypogaea HOM05D003599 ORTHO05D004221 3.4e-16 89.7 178 33.7
arahy.Tifrunner.gnm1.ann1.7I49QA Arachis hypogaea HOM05D003599 ORTHO05D004221 4.5e-16 89.4 180 33.9
Pp3c16_5830 Physcomitrium patens HOM05D003599 ORTHO05D004221 7.7e-16 88.6 179 38.5
QL04p004437 Quercus lobata HOM05D003599 ORTHO05D004221 1.3e-15 87.8 106 50.0
VMungo1215G1265 Vigna mungo HOM05D003599 ORTHO05D004221 2.9e-15 86.7 77 59.7
Aqoxy1G00213 Aquilegia oxysepala HOM05D003599 ORTHO05D004221 1.4e-14 84.3 172 33.1
Actinidia28306 Actinidia chinensis HOM05D003599 ORTHO05D004221 2.7e-13 80.1 142 38.0
Actinidia31688 Actinidia chinensis HOM05D003599 ORTHO05D004221 1.5e-11 74.3 216 29.2
TPR.G12134 Trifolium pratense HOM05D003599 ORTHO05D004221 7.4e-11 72.0 73 53.4
Dinv43470 Davidia involucrata HOM05D003599 ORTHO05D004221 3.7e-10 69.7 101 40.6
Lalb_Chr20g0108091 Lupinus albus HOM05D003599 ORTHO05D004221 1.1e-09 68.2 38 76.3
TPR.G26308 Trifolium pratense HOM05D003599 ORTHO05D004221 5.3e-09 65.9 38 73.7
QL04p003812 Quercus lobata HOM05D003599 ORTHO05D004221 5.9e-08 62.4 60 58.3
TAR369G0496 Trochodendron aralioides HOM05D003599 ORTHO05D004221 2.9e-07 60.1 83 42.2


User provided reference genes

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