Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28827 Sapria himalayana HOM05D025004 ORTHO05D023835 2.6e-40 168.3 89 100.0
SHI20956 Sapria himalayana HOM05D025004 ORTHO05D023835 9.5e-14 80.1 111 47.7
CiPaw.07G043100 Carya illinoinensis HOM05D000002 ORTHO05D000001 6.3e-10 67.4 85 44.7
Sopen08g006540 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-09 65.1 91 41.8
SHI11847 Sapria himalayana HOM05D025004 ORTHO05D023835 9.2e-09 63.5 78 52.6
EL10Ac8g19436 Beta vulgaris HOM05D000002 ORTHO05D000001 1.6e-08 62.8 93 35.5
FvH4_7g33701 Fragaria vesca HOM05D000002 ORTHO05D000001 1.6e-08 62.8 96 39.6
RcHm_v2.0_Chr5g0080061 Rosa chinensis HOM05D000002 ORTHO05D000001 2.7e-08 62.0 96 41.7
SHI08986 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-08 62.0 57 54.4
Thhalv10028209m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 7.8e-08 60.5 84 42.9
PSO151G0096 Papaver somniferum HOM05D000002 ORTHO05D000001 7.8e-08 60.5 92 37.0
ECA240G2946 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 59.7 94 39.4
CiPaw.04G174800 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.7e-07 59.3 81 43.2
A04p14970 Brassica napus HOM05D000002 ORTHO05D000001 3.9e-07 58.2 77 48.1
ECA233G3173 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-07 58.2 85 42.4
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-07 58.2 85 42.4
PSO675G3439 Papaver somniferum HOM05D000002 ORTHO05D000001 5.0e-07 57.8 97 38.1
ECA238G0426 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.6e-07 57.4 94 36.2
ECA232G2478 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-07 57.0 85 44.7
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-07 57.0 85 44.7
ECA238G1149 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-07 57.0 85 44.7
ECA238G1515 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-07 57.0 85 44.7
ECA247G1119 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-07 57.0 85 44.7
Sopen08g008510 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-07 57.0 85 38.8
Potri.011G016400 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.1e-06 56.6 98 33.7
ECA246G5056 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 56.2 91 35.2
EL10Ac5g11206 Beta vulgaris HOM05D000002 ORTHO05D000001 2.5e-06 55.5 85 34.1
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 55.5 84 38.1
PSO675G9344 Papaver somniferum HOM05D000002 ORTHO05D000001 2.5e-06 55.5 84 36.9
TPR.G9293 Trifolium pratense HOM05D000002 ORTHO05D000001 2.5e-06 55.5 80 40.0
CANSAT35G1555 Cannabis sativa HOM05D000002 ORTHO05D000001 3.3e-06 55.1 84 36.9
ECA247G1667 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-06 55.1 78 38.5
arahy.Tifrunner.gnm1.ann1.8W4KUS Arachis hypogaea HOM05D000097 ORTHO05D000041 4.3e-06 54.7 94 37.2
arahy.Tifrunner.gnm1.ann1.NKKF6S Arachis hypogaea HOM05D000097 ORTHO05D000041 4.3e-06 54.7 94 37.2
EL10Ac1g01502 Beta vulgaris HOM05D000002 ORTHO05D000001 4.3e-06 54.7 87 33.3
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-06 54.3 83 36.1
ECA240G3973 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-06 53.9 91 36.3
ECA247G1405 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-06 53.9 88 38.6
SHI10429 Sapria himalayana HOM05D025004 ORTHO05D023835 7.3e-06 53.9 75 49.3
A03p13150 Brassica napus HOM05D000002 ORTHO05D000001 9.5e-06 53.5 84 35.7
BraA03t10626Z Brassica rapa HOM05D000002 ORTHO05D000001 9.5e-06 53.5 84 35.7
FvH4_7g31212 Fragaria vesca HOM05D000002 ORTHO05D000001 9.5e-06 53.5 55 43.6
Sopen04g014220 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-06 53.5 92 39.1


User provided reference genes

Program Settings