Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28770 Sapria himalayana HOM05D003029 ORTHO05D003413 4.7e-228 794.3 427 100.0
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 2.0e-24 117.9 183 40.4
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 2.8e-23 114.0 228 35.1
Nn3g20075 Nelumbo nucifera HOM05D003029 ORTHO05D003413 1.2e-21 108.6 231 35.1
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 1.7e-20 104.8 226 35.8
Manes.13G051200 Manihot esculenta HOM05D003029 ORTHO05D003413 7.2e-19 99.4 225 36.0
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 1.6e-18 98.2 209 35.9
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 2.1e-18 97.8 177 39.0
Manes.12G049400 Manihot esculenta HOM05D003029 ORTHO05D003413 4.7e-18 96.7 180 37.8
COL.COLO4_20221 Corchorus olitorius HOM05D003029 ORTHO05D003413 6.1e-18 96.3 181 37.6
Glyma.08G110100 Glycine max HOM05D003029 ORTHO05D003413 5.2e-17 93.2 191 36.6
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 5.2e-17 93.2 179 36.3
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 6.8e-17 92.8 181 35.4
DCAR_026643 Daucus carota HOM05D003029 ORTHO05D003413 8.8e-17 92.4 179 36.3
PSO017G1724 Papaver somniferum HOM05D003029 ORTHO05D003413 8.8e-17 92.4 184 38.6
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 2.0e-16 91.3 180 37.2
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 2.6e-16 90.9 180 33.9
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 2.6e-16 90.9 176 36.4
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 5.7e-16 89.7 179 35.2
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 5.7e-16 89.7 180 36.7
FAN22G0425 Fragaria x ananassa HOM05D003029 ORTHO05D003413 7.5e-16 89.4 180 36.7
FAN07G2221 Fragaria x ananassa HOM05D003029 ORTHO05D003413 4.9e-15 86.7 180 36.1
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 6.3e-15 86.3 180 33.3
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 6.3e-15 86.3 178 36.5
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 6.3e-15 86.3 169 36.1
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 6.3e-15 86.3 182 35.7
Gorai.006G223500 Gossypium raimondii HOM05D003029 ORTHO05D003413 6.3e-15 86.3 168 35.1
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 6.3e-15 86.3 182 35.7
Sabra17G0052100 Salix brachista HOM05D003029 ORTHO05D003413 6.3e-15 86.3 198 34.8
Haze_11649 Corylus avellana HOM05D003029 ORTHO05D003413 8.3e-15 85.9 179 35.2
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 8.3e-15 85.9 191 34.6
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 1.1e-14 85.5 179 35.8
Glyma.05G152400 Glycine max HOM05D003029 ORTHO05D003413 1.1e-14 85.5 225 32.4
Gorai.011G153200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.8e-14 84.7 228 32.5
CiPaw.02G064700 Carya illinoinensis HOM05D003029 ORTHO05D003413 2.4e-14 84.3 181 35.9
PSO063G2363 Papaver somniferum HOM05D003029 ORTHO05D003413 2.4e-14 84.3 193 35.8
VMungo0251G2529 Vigna mungo HOM05D003029 ORTHO05D003413 2.4e-14 84.3 167 35.3
Gohir.A10G127900 Gossypium hirsutum HOM05D003029 ORTHO05D003413 3.1e-14 84.0 199 33.2
Gohir.D09G199800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 3.1e-14 84.0 168 35.1
Gohir.D10G138100 Gossypium hirsutum HOM05D003029 ORTHO05D003413 4.1e-14 83.6 228 32.0
Lj4g0000581 Lotus japonicus HOM05D003029 ORTHO05D003413 5.4e-14 83.2 168 38.1
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 7.0e-14 82.8 220 32.3
Lalb_Chr23g0278361 Lupinus albus HOM05D003029 ORTHO05D003413 7.0e-14 82.8 177 35.6
DCAR_004743 Daucus carota HOM05D003029 ORTHO05D003413 9.1e-14 82.4 220 31.8
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 9.1e-14 82.4 182 33.5
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 9.1e-14 82.4 135 39.3
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 1.2e-13 82.0 120 41.7
Glyma.11G255200 Glycine max HOM05D003029 ORTHO05D003413 1.2e-13 82.0 181 33.7
Migut.G00757 Erythranthe guttata HOM05D003029 ORTHO05D003413 2.0e-13 81.3 210 32.4
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 2.0e-13 81.3 197 33.5
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 2.7e-13 80.9 224 33.0
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 2.7e-13 80.9 224 33.0
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 2.7e-13 80.9 180 32.8
FAN17G0226 Fragaria x ananassa HOM05D003029 ORTHO05D003413 3.5e-13 80.5 224 33.0
Phvul.003G050800 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 4.5e-13 80.1 167 35.3
Medtr8g081570 Medicago truncatula HOM05D003029 ORTHO05D003413 5.9e-13 79.7 181 34.8
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 7.7e-13 79.3 181 33.7
TPR.G11807 Trifolium pratense HOM05D003029 ORTHO05D003413 7.7e-13 79.3 242 33.1
CDE05G0723 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 1.0e-12 79.0 169 34.9
Haze_03354 Corylus avellana HOM05D003029 ORTHO05D003413 1.0e-12 79.0 255 30.6
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 1.3e-12 78.6 121 41.3
Zm00001eb210840 Zea mays HOM05D003029 ORTHO05D003413 1.3e-12 78.6 155 32.3
Zm00001eb064410 Zea mays HOM05D003029 ORTHO05D003413 1.7e-12 78.2 167 31.7
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.3e-12 77.8 196 33.2
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.3e-12 77.8 184 34.8
SalBow6G0319 Salvia bowleyana HOM05D003029 ORTHO05D003413 2.3e-12 77.8 79 51.9
SalBow6G1280 Salvia bowleyana HOM05D003029 ORTHO05D003413 2.3e-12 77.8 79 51.9
Cc01_g16520 Coffea canephora HOM05D003029 ORTHO05D003413 2.9e-12 77.4 79 49.4
TWI36G0576 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 2.9e-12 77.4 281 28.8
MD13G1282000 Malus domestica HOM05D003029 ORTHO05D003413 3.8e-12 77.0 180 31.7
Ciclev10005071m.g Citrus clementina HOM05D003029 ORTHO05D003413 5.0e-12 76.6 131 38.2
TWI75G0963 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 5.0e-12 76.6 282 28.0
Phvul.003G050700 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 6.6e-12 76.3 167 33.5
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 8.6e-12 75.9 182 33.5
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 8.6e-12 75.9 118 41.5
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 8.6e-12 75.9 179 33.0
VMungo0251G3135 Vigna mungo HOM05D003029 ORTHO05D003413 8.6e-12 75.9 167 34.1
Manes.03G144600 Manihot esculenta HOM05D003029 ORTHO05D003413 1.1e-11 75.5 185 35.1
Sp2g18960 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.1e-11 75.5 282 28.7
HPP92_025250 Vanilla planifolia HOM05D003029 ORTHO05D003413 1.1e-11 75.5 166 34.9
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.5e-11 75.1 179 33.0
AUR62020859 Chenopodium quinoa HOM05D003029 ORTHO05D003413 1.5e-11 75.1 177 32.8
Sabra16G0202200 Salix brachista HOM05D003029 ORTHO05D003413 1.5e-11 75.1 218 31.7
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 1.5e-11 75.1 241 31.5
THA.LOC104822483 Tarenaya hassleriana HOM05D003029 ORTHO05D003413 1.9e-11 74.7 104 40.4
TWI18G0251 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 1.9e-11 74.7 272 29.8
BraA06t26818Z Brassica rapa HOM05D003029 ORTHO05D003413 3.3e-11 73.9 166 33.1
Dinv14526 Davidia involucrata HOM05D003029 ORTHO05D003413 3.3e-11 73.9 115 40.0
Potri.017G058600 Populus trichocarpa HOM05D003029 ORTHO05D003413 3.3e-11 73.9 198 31.3
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea HOM05D003029 ORTHO05D003413 4.2e-11 73.6 168 32.7
CSS0036198 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 4.2e-11 73.6 117 38.5
Psat7g075040 Pisum sativum HOM05D003029 ORTHO05D003413 4.2e-11 73.6 150 36.7
C07p39290 Brassica napus HOM05D003029 ORTHO05D003413 5.5e-11 73.2 185 31.4
BolC7t44449H Brassica oleracea HOM05D003029 ORTHO05D003413 5.5e-11 73.2 185 31.4
CARHR292000 Cardamine hirsuta HOM05D003029 ORTHO05D003413 5.5e-11 73.2 85 45.9
unitig_8.g3407 Utricularia gibba HOM05D003029 ORTHO05D003413 5.5e-11 73.2 83 49.4
BraA01t04389Z Brassica rapa HOM05D003029 ORTHO05D003413 7.2e-11 72.8 161 35.4
Carub.0008s0826 Capsella rubella HOM05D003029 ORTHO05D003413 7.2e-11 72.8 86 51.2
AL625U10010 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 9.5e-11 72.4 85 47.1
A06p39050 Brassica napus HOM05D003029 ORTHO05D003413 9.5e-11 72.4 180 32.8
Cc03_g08440 Coffea canephora HOM05D003029 ORTHO05D003413 9.5e-11 72.4 231 29.0
SalBow3G0925 Salvia bowleyana HOM05D003029 ORTHO05D003413 9.5e-11 72.4 251 31.5
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea HOM05D003029 ORTHO05D003413 1.2e-10 72.0 168 31.5
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 1.2e-10 72.0 118 38.1
vmacro02792 Vaccinium macrocarpon HOM05D003029 ORTHO05D003413 1.6e-10 71.6 117 39.3
Sabra16G0202400 Salix brachista HOM05D003029 ORTHO05D003413 2.1e-10 71.2 232 31.0
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 2.1e-10 71.2 120 38.3
Sc13g0000380 Simmondsia chinensis HOM05D003029 ORTHO05D003413 2.1e-10 71.2 176 33.0
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 2.1e-10 71.2 83 49.4
DCAR_012677 Daucus carota HOM05D003029 ORTHO05D003413 2.8e-10 70.9 85 41.2
BcaB04g21298 Brassica carinata HOM05D003029 ORTHO05D003413 3.6e-10 70.5 180 31.7
Eucgr.H00027 Eucalyptus grandis HOM05D003029 ORTHO05D003413 3.6e-10 70.5 188 30.9
ClCG05G003130 Citrullus lanatus HOM05D003029 ORTHO05D003413 4.7e-10 70.1 97 38.1
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 4.7e-10 70.1 83 49.4
Lj2C1122G5 Lonicera japonica HOM05D003029 ORTHO05D003413 6.1e-10 69.7 139 35.3
BolC1t05561H Brassica oleracea HOM05D003029 ORTHO05D003413 8.0e-10 69.3 257 28.0
Rhsim13G0050000 Rhododendron simsii HOM05D003029 ORTHO05D003413 8.0e-10 69.3 127 36.2
GSVIVG01004954001 Vitis vinifera HOM05D003029 ORTHO05D003413 1.0e-09 68.9 316 28.2
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.4e-09 68.6 76 50.0
BraA03t12696Z Brassica rapa HOM05D003029 ORTHO05D003413 1.4e-09 68.6 312 27.9
AUR62018560 Chenopodium quinoa HOM05D003029 ORTHO05D003413 1.4e-09 68.6 279 27.6
Ca_17981_v3 Cicer arietinum L. HOM05D003029 ORTHO05D003413 1.4e-09 68.6 340 27.4
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 1.8e-09 68.2 102 39.2
Hund19006 Selenicereus undatus HOM05D003029 ORTHO05D003413 1.8e-09 68.2 114 37.7
Sc05g0001900 Simmondsia chinensis HOM05D003029 ORTHO05D003413 1.8e-09 68.2 308 25.6
Cpa.g.sc157.52 Carica papaya HOM05D003029 ORTHO05D003413 2.3e-09 67.8 85 43.5
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.3e-09 67.8 102 39.2
MELO3C006294.2 Cucumis melo HOM05D003029 ORTHO05D003413 3.0e-09 67.4 85 38.8
CsaV3_3G010750 Cucumis sativus L. HOM05D003029 ORTHO05D003413 3.0e-09 67.4 95 36.8
TWI36G1114 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 3.0e-09 67.4 284 26.1
AT5G43490 Arabidopsis thaliana HOM05D003029 ORTHO05D003413 4.0e-09 67.0 85 44.7
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 5.2e-09 66.6 289 29.1
BcaC06g30775 Brassica carinata HOM05D003029 ORTHO05D003413 5.2e-09 66.6 235 30.2
A05p40910 Brassica napus HOM05D003029 ORTHO05D003413 5.2e-09 66.6 328 27.1
BraA05t22820Z Brassica rapa HOM05D003029 ORTHO05D003413 5.2e-09 66.6 328 27.1
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 5.2e-09 66.6 116 36.2
QL06p026140 Quercus lobata HOM05D003029 ORTHO05D003413 5.2e-09 66.6 271 28.0
Actinidia23384 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.2e-08 65.5 113 37.2
BNapus_Darmor_BZH_scaffold_109p00150 Brassica napus HOM05D003029 ORTHO05D003413 1.2e-08 65.5 336 25.3
Ah.13g077980 Amaranthus hybridus HOM05D003029 ORTHO05D003413 1.5e-08 65.1 116 34.5
Migut.D02515 Erythranthe guttata HOM05D003029 ORTHO05D003413 1.5e-08 65.1 78 53.8
SGA_v2.0_scaffold270G46323 Striga asiatica HOM05D003029 ORTHO05D003413 1.5e-08 65.1 319 25.4
THA.LOC104808800 Tarenaya hassleriana HOM05D003029 ORTHO05D003413 1.5e-08 65.1 83 43.4
EL10Ac3g07458 Beta vulgaris HOM05D003029 ORTHO05D003413 2.0e-08 64.7 111 36.9
CiPaw.14G040000 Carya illinoinensis HOM05D003029 ORTHO05D003413 2.0e-08 64.7 213 30.0
Hma1.2p1_0349F.1_g132190 Hydrangea macrophylla HOM05D003029 ORTHO05D003413 2.0e-08 64.7 176 30.7
PGR083G2864 Punica granatum HOM05D003029 ORTHO05D003413 2.6e-08 64.3 190 32.6
Ah.04g149350 Amaranthus hybridus HOM05D003029 ORTHO05D003413 3.4e-08 63.9 118 34.7
AL3G18580 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 3.4e-08 63.9 248 29.0
BcaC05g29857 Brassica carinata HOM05D003029 ORTHO05D003413 4.4e-08 63.5 315 27.9
Sp3g06230 Schrenkiella parvula HOM05D003029 ORTHO05D003413 4.4e-08 63.5 300 26.0
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 9.8e-08 62.4 76 43.4
Thhalv10004154m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 9.8e-08 62.4 308 25.3
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 9.8e-08 62.4 264 28.4
MSTRG.9800 Avicennia marina HOM05D003029 ORTHO05D003413 1.3e-07 62.0 77 46.8
HanXRQChr01g0022171 Helianthus annuus HOM05D003029 ORTHO05D003413 1.3e-07 62.0 86 43.0
Oeu049048.2 Olea europaea HOM05D003029 ORTHO05D003413 1.3e-07 62.0 208 30.3
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 1.3e-07 62.0 294 26.5
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 2.9e-07 60.8 230 29.6
MBI07_g27661_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 3.7e-07 60.5 83 45.8
Thhalv10020618m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 4.9e-07 60.1 244 28.3
MBI07_g42750_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 4.9e-07 60.1 180 32.8
A03p35170 Brassica napus HOM05D003029 ORTHO05D003413 6.3e-07 59.7 310 26.8
Oeu043441.1 Olea europaea HOM05D003029 ORTHO05D003413 6.3e-07 59.7 207 28.5
ATR0561G140 Amborella trichopoda HOM05D003029 ORTHO05D003413 8.3e-07 59.3 81 42.0
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 8.3e-07 59.3 117 33.3
HanXRQChr11g0344321 Helianthus annuus HOM05D003029 ORTHO05D003413 8.3e-07 59.3 86 45.3
ECA248G1735 Erigeron canadensis HOM05D003029 ORTHO05D003413 1.4e-06 58.5 80 41.2
Sp3g06210 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.8e-06 58.2 307 25.7
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 2.4e-06 57.8 186 29.0
Lsat_1_v5_gn_1_70641 Lactuca sativa HOM05D003029 ORTHO05D003413 3.2e-06 57.4 83 45.8
SGA_v2.0_scaffold156G37278 Striga asiatica HOM05D003029 ORTHO05D003413 4.1e-06 57.0 83 39.8
Oeu057857.3 Olea europaea HOM05D003029 ORTHO05D003413 7.0e-06 56.2 146 30.8
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 7.0e-06 56.2 76 42.1


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