Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-70 269.6 145 100.0
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 1.9e-40 169.5 154 69.5
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 6.2e-39 164.5 152 68.4
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 6.2e-39 164.5 152 68.4
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 1.1e-38 163.7 154 68.2
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 1.1e-38 163.7 157 66.2
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 1.4e-38 163.3 156 66.7
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.1e-38 162.2 154 67.5
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 5.8e-37 157.9 154 66.2
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 7.6e-37 157.5 154 66.9
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 7.6e-37 157.5 154 66.9
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 2.2e-36 156.0 153 64.7
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 1.4e-35 153.3 152 65.1
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 7.1e-35 151.0 148 65.5
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 2.1e-34 149.4 151 64.9
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 1.0e-33 147.1 147 65.3
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 3.0e-33 145.6 147 64.6
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 8.7e-33 144.1 147 63.3
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 8.7e-33 144.1 153 60.8
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 1.9e-32 142.9 153 61.4
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 2.5e-32 142.5 149 63.1
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 5.6e-32 141.4 147 62.6
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 6.2e-31 137.9 148 62.2
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 2.7e-26 122.5 123 64.2
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 4.6e-26 121.7 130 60.8
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 6.0e-26 121.3 126 61.9
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 7.9e-26 120.9 149 55.7
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 1.0e-25 120.6 124 64.5
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.0e-25 120.6 149 55.0
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.0e-25 120.6 149 55.0
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 3.0e-25 119.0 152 54.6
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 5.1e-25 118.2 113 66.4
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 6.7e-25 117.9 147 55.8
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 1.9e-24 116.3 130 60.0
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 3.3e-24 115.5 153 54.2
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 3.3e-24 115.5 153 54.2
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 1.6e-23 113.2 118 61.9
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 1.6e-23 113.2 126 58.7
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 3.7e-23 112.1 147 53.7
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 6.9e-22 107.8 153 52.3
SHI53009 Sapria himalayana HOM05D006604 ORTHO05D007974 3.4e-21 105.5 116 61.2
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 7.6e-21 104.4 110 61.8
Potri.014G168000 Populus trichocarpa HOM05D006604 ORTHO05D007974 2.9e-20 102.4 88 70.5
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.4e-19 100.1 111 56.8
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 1.9e-19 99.8 136 52.2
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 2.1e-18 96.3 80 72.5
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 1.4e-14 83.6 146 43.8
GSVIVG01035307001 Vitis vinifera HOM05D000029 ORTHO05D001072 1.2e-13 80.5 72 63.9
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 1.0e-12 77.4 77 64.9
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.1e-11 73.9 70 64.3
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.2e-11 72.4 67 65.7
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 7.2e-11 71.2 91 54.9
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 1.2e-10 70.5 76 63.2
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 1.2e-10 70.5 71 62.0
SHI01304 Sapria himalayana HOM05D006604 ORTHO05D007974 7.9e-10 67.8 79 59.5
SHI55017 Sapria himalayana HOM05D006604 ORTHO05D007974 7.9e-10 67.8 52 71.2
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 1.0e-09 67.4 71 59.2
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 8.8e-09 64.3 49 75.5
Nitab4.5_0002418g0200 Nicotiana tabacum HOM05D006604 ORTHO05D007974 8.8e-09 64.3 63 65.1
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.1e-08 63.9 62 64.5
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 1.5e-08 63.5 98 44.9
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 4.3e-08 62.0 71 59.2
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 4.3e-08 62.0 71 59.2
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 4.3e-08 62.0 142 40.8
MELO3C029409.2 Cucumis melo HOM05D006604 ORTHO05D007974 8.2e-07 57.8 61 62.3
MD15G1429600 Malus domestica HOM05D006604 ORTHO05D007974 1.1e-06 57.4 58 63.8
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 2.4e-06 56.2 54 63.0
ClCG07G016010 Citrullus lanatus HOM05D006604 ORTHO05D007974 5.3e-06 55.1 32 84.4
Peaxi162Scf00000g01811 Petunia axillaris HOM05D006604 ORTHO05D007974 5.3e-06 55.1 150 37.3
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 6.9e-06 54.7 47 66.0


User provided reference genes

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